RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 CASC10Q5T4H9 136 aa14.53□□□□□ -0.08
SSBP4-210ENST00000601444 Q8NAQ8 132 aa14.53□□□□□ -0.08
SSBP4-210ENST00000601444 IL17DQ8TAD2 202 aa14.53□□□□□ -0.08
SSBP4-210ENST00000601444 PHYHIPLQ96FC7 376 aa14.53□□□□□ -0.08
SSBP4-210ENST00000601444 IGHV3OR16-12A0A075B7B8 117 aa14.52□□□□□ -0.09
SSBP4-210ENST00000601444 BORCS7-ASMTA0A0B4J1R7 106 aa14.52□□□□□ -0.09
SSBP4-210ENST00000601444 IGHV4-28A0A0C4DH34 117 aa14.52□□□□□ -0.09
SSBP4-210ENST00000601444 A0A1W2PPV4 95 aa14.52□□□□□ -0.09
SSBP4-210ENST00000601444 RBMY1A1P0DJD3 496 aaKnown RBP14.52□□□□□ -0.09
SSBP4-210ENST00000601444 RBMY1CP0DJD4 496 aa14.52□□□□□ -0.09
SSBP4-210ENST00000601444 ICAM4Q14773 271 aa14.52□□□□□ -0.09
SSBP4-210ENST00000601444 RBMY1FQ15415 496 aaKnown RBP14.52□□□□□ -0.09
SSBP4-210ENST00000601444 KHDC3LQ587J8 217 aa14.52□□□□□ -0.09
SSBP4-210ENST00000601444 C1orf158Q8N1D5 194 aa14.52□□□□□ -0.09
SSBP4-210ENST00000601444 RPP25LQ8N5L8 163 aaKnown RBP14.52□□□□□ -0.09
SSBP4-210ENST00000601444 CSMD3Q7Z407 3707 aa14.52□□□□□ -0.09
SSBP4-210ENST00000601444 hCG_2014768A0A024R1R8 64 aa14.51□□□□□ -0.09
SSBP4-210ENST00000601444 HMSDA8MTL9 139 aa14.51□□□□□ -0.09
SSBP4-210ENST00000601444 CRXO43186 299 aaPredicted RBP14.51□□□□□ -0.09
SSBP4-210ENST00000601444 UBE2L3P68036 154 aaKnown RBP14.51□□□□□ -0.09
SSBP4-210ENST00000601444 ZNF705AQ6ZN79 300 aaPredicted RBP14.51□□□□□ -0.09
SSBP4-210ENST00000601444 KCNRGQ8N5I3 272 aa14.51□□□□□ -0.09
SSBP4-210ENST00000601444 TRAV12-2A0A075B6T6 113 aa14.5□□□□□ -0.09
SSBP4-210ENST00000601444 BOLA2-SMG1P6H3BVE0 249 aa14.5□□□□□ -0.09
SSBP4-210ENST00000601444 TAAR5O14804 337 aa14.5□□□□□ -0.09
SSBP4-210ENST00000601444 TAS2R45P59539 299 aa14.5□□□□□ -0.09
SSBP4-210ENST00000601444 SERF2P84101 59 aa14.5□□□□□ -0.09
SSBP4-210ENST00000601444 BAP18Q8IXM2 172 aa14.5□□□□□ -0.09
SSBP4-210ENST00000601444 GNPNAT1Q96EK6 184 aaPredicted RBP14.5□□□□□ -0.09
SSBP4-210ENST00000601444 JTBO76095 146 aa14.49□□□□□ -0.09
SSBP4-210ENST00000601444 MIFP14174 115 aa14.49□□□□□ -0.09
SSBP4-210ENST00000601444 CDC34P49427 236 aaPredicted RBP14.49□□□□□ -0.09
SSBP4-210ENST00000601444 RANP62826 216 aaKnown RBP14.49□□□□□ -0.09
SSBP4-210ENST00000601444 ERCC8Q13216 396 aa14.49□□□□□ -0.09
SSBP4-210ENST00000601444 KIR3DS1Q14943 382 aa14.49□□□□□ -0.09
SSBP4-210ENST00000601444 OR10J6PQ8NGY7 276 aa14.49□□□□□ -0.09
SSBP4-210ENST00000601444 MRPL53Q96EL3 112 aaKnown RBP14.49□□□□□ -0.09
SSBP4-210ENST00000601444 IGF2BP2-AS1Q96M15 143 aa14.49□□□□□ -0.09
SSBP4-210ENST00000601444 C11orf68Q9H3H3 251 aaKnown RBP14.49□□□□□ -0.09
SSBP4-210ENST00000601444 AAMDCQ9H7C9 122 aa14.49□□□□□ -0.09
SSBP4-210ENST00000601444 PPP1R14DQ9NXH3 145 aa14.49□□□□□ -0.09
SSBP4-210ENST00000601444 STARD9Q9P2P6 4700 aa14.49□□□□□ -0.09
SSBP4-210ENST00000601444 CT45A10P0DMU9 189 aa14.48□□□□□ -0.09
SSBP4-210ENST00000601444 ZNF345Q14585 488 aa14.48□□□□□ -0.09
SSBP4-210ENST00000601444 SSX7Q7RTT5 188 aa14.48□□□□□ -0.09
SSBP4-210ENST00000601444 RAB24Q969Q5 203 aa14.48□□□□□ -0.09
SSBP4-210ENST00000601444 ARPC5LQ9BPX5 153 aa14.48□□□□□ -0.09
SSBP4-210ENST00000601444 PRELID1Q9Y255 219 aa14.48□□□□□ -0.09
SSBP4-210ENST00000601444 NPIPB6E9PJ23 425 aa14.47□□□□□ -0.09
SSBP4-210ENST00000601444 MBP02144 154 aa14.47□□□□□ -0.09
SSBP4-210ENST00000601444 PRM2P04554 102 aa14.47□□□□□ -0.09
SSBP4-210ENST00000601444 Q9H3A6 140 aa14.47□□□□□ -0.09
SSBP4-210ENST00000601444 IGKV2-40A0A087WW87 121 aaPredicted RBP14.46□□□□□ -0.09
SSBP4-210ENST00000601444 IGKV2D-40P01614 121 aaPredicted RBP14.46□□□□□ -0.09
SSBP4-210ENST00000601444 AMBPP02760 352 aa14.46□□□□□ -0.09
SSBP4-210ENST00000601444 STAG3L2P0CL84 134 aa14.46□□□□□ -0.09
SSBP4-210ENST00000601444 STAG3L3P0CL85 134 aa14.46□□□□□ -0.09
SSBP4-210ENST00000601444 ARL14EPLP0DKL9 152 aa14.46□□□□□ -0.09
SSBP4-210ENST00000601444 PMS2P11Q13670 270 aa14.46□□□□□ -0.09
SSBP4-210ENST00000601444 PQLC2Q6ZP29 291 aa14.46□□□□□ -0.09
SSBP4-210ENST00000601444 GOLT1BQ9Y3E0 138 aa14.46□□□□□ -0.09
SSBP4-210ENST00000601444 A0A0D9SG52 128 aa14.45□□□□□ -0.1
SSBP4-210ENST00000601444 NANOS2P60321 138 aaKnown RBP14.45□□□□□ -0.1
SSBP4-210ENST00000601444 ZNF726P1Q15940 193 aa14.45□□□□□ -0.1
SSBP4-210ENST00000601444 TCTE3Q8IZS6 198 aa14.45□□□□□ -0.1
SSBP4-210ENST00000601444 NEU1Q99519 415 aa14.45□□□□□ -0.1
SSBP4-210ENST00000601444 ACTR3CQ9C0K3 210 aaPredicted RBP14.45□□□□□ -0.1
SSBP4-210ENST00000601444 AGPAT4-IT1Q9H0P7 198 aa14.45□□□□□ -0.1
SSBP4-210ENST00000601444 A0A1B0GVG6 124 aa14.44□□□□□ -0.1
SSBP4-210ENST00000601444 J3KRW8 73 aa14.44□□□□□ -0.1
SSBP4-210ENST00000601444 INSP01308 110 aa14.44□□□□□ -0.1
SSBP4-210ENST00000601444 CDKN1BP46527 198 aa14.44□□□□□ -0.1
SSBP4-210ENST00000601444 LYPD1Q8N2G4 141 aa14.44□□□□□ -0.1
SSBP4-210ENST00000601444 C11orf45Q8TAV5 145 aa14.44□□□□□ -0.1
SSBP4-210ENST00000601444 VGLL1Q99990 258 aa14.44□□□□□ -0.1
SSBP4-210ENST00000601444 PLA2G2EQ9NZK7 142 aa14.44□□□□□ -0.1
SSBP4-210ENST00000601444 CXorf65A6NEN9 183 aa14.43□□□□□ -0.1
SSBP4-210ENST00000601444 BCL2L11O43521 198 aa14.43□□□□□ -0.1
SSBP4-210ENST00000601444 CD300CQ08708 224 aa14.43□□□□□ -0.1
SSBP4-210ENST00000601444 TMUB2Q71RG4 321 aa14.43□□□□□ -0.1
SSBP4-210ENST00000601444 HYLS1Q96M11 299 aa14.43□□□□□ -0.1
SSBP4-210ENST00000601444 TMEM208Q9BTX3 173 aa14.43□□□□□ -0.1
SSBP4-210ENST00000601444 CELA1Q9UNI1 258 aa14.43□□□□□ -0.1
SSBP4-210ENST00000601444 PGPA6NDG6 321 aa14.42□□□□□ -0.1
SSBP4-210ENST00000601444 SMIM9A6NGZ8 99 aa14.42□□□□□ -0.1
SSBP4-210ENST00000601444 ZNF705GA8MUZ8 300 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-210ENST00000601444 GCHFRP30047 84 aa14.42□□□□□ -0.1
SSBP4-210ENST00000601444 EMP1P54849 157 aa14.42□□□□□ -0.1
SSBP4-210ENST00000601444 LGALSLQ3ZCW2 172 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-210ENST00000601444 ZNF471Q9BX82 626 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-210ENST00000601444 KANTRA0A1W2PQU2 76 aa14.41□□□□□ -0.1
SSBP4-210ENST00000601444 AKR1C8PQ5T2L2 129 aa14.41□□□□□ -0.1
SSBP4-210ENST00000601444 GFI1BQ5VTD9 330 aa14.41□□□□□ -0.1
SSBP4-210ENST00000601444 C9orf47Q6ZRZ4 202 aa14.41□□□□□ -0.1
SSBP4-210ENST00000601444 LINC00477Q96M19 166 aa14.41□□□□□ -0.1
SSBP4-210ENST00000601444 OTORQ9NRC9 128 aa14.41□□□□□ -0.1
SSBP4-210ENST00000601444 KMT2CQ8NEZ4 4911 aaKnown RBP14.41□□□□□ -0.1
SSBP4-210ENST00000601444 HBE1P02100 147 aa14.4□□□□□ -0.1
SSBP4-210ENST00000601444 TSPOP30536 169 aa14.4□□□□□ -0.1
SSBP4-210ENST00000601444 CSN1S1P47710 185 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms