RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RNF2Q99496 336 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 RHPN1-AS1Q9BWJ2 59 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 GGTLC1Q9BX51 225 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 C6orf62Q9GZU0 229 aaPredicted RBP2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 WFDC10AQ9H1F0 79 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 TMEM231Q9H6L2 316 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 ENY2Q9NPA8 101 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 SHPKQ9UHJ6 478 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 U3KQ87 197 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 V9GYH0 126 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGHV3-21A0A0B4J1V1 117 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 LCE6AA0A183 80 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 NAP1L6A6NFF2 107 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 PITX3O75364 302 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 SERF1AO75920 110 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 YIF1AO95070 293 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGKV1-17P01599 117 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGLC1P0CG04 106 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 SULT1A3P0DMM9 295 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 SULT1A4P0DMN0 295 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 ANXA3P12429 323 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 NPPCP23582 126 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 NPY1RP25929 384 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 S100A5P33763 92 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 OPRK1P41145 380 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 UBE2MP61081 183 aaKnown RBP2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 PAFAH1B2P68402 229 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 TNFRSF9Q07011 255 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 SMCO1Q147U7 214 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 PRSS54Q6PEW0 395 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 FAM159AQ6UWV7 190 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 TCF24Q7RTU0 167 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 LGI3Q8N145 548 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 TOMM5Q8N4H5 51 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR1S2Q8NGQ3 325 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 RNASE11Q8TAA1 199 aaKnown RBP2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 C20orf24Q9BUV8 137 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 MRPL36Q9P0J6 103 aaKnown RBP2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 PUS1Q9Y606 427 aaKnown RBP eCLIP2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 STARD9Q9P2P6 4700 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 DNAH7Q8WXX0 4024 aa2.44□□□□□ -2.02
CKS1BP3-201ENST00000600888 HELTA6NFD8 242 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 CEBPZOSA8MTT3 80 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 ZNF207O43670 478 aaKnown RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 MED6O75586 246 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 NDUFB6O95139 128 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 SFT2D2O95562 160 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGHV3-48P01763 117 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 AKR1C4P17516 323 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 GPX4P36969 197 aaPredicted RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 NUP62P37198 522 aaPredicted RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 EIF2B2P49770 351 aaKnown RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 RND2P52198 227 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 AP2S1P53680 142 aaPredicted RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 PRR4Q16378 134 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 TMEM41BQ5BJD5 291 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 SPINK9Q5DT21 86 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 SPANXN2Q5MJ10 180 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR8G2PQ6IF36 304 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 LINC00299Q6ZSB3 139 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 LYZL2Q7Z4W2 148 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 C14orf178Q8N769 122 aaPredicted RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 DTD1Q8TEA8 209 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 DCANP1Q8TF63 244 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 Q8WTZ3 238 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 NARS2Q96I59 477 aaKnown RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 CIB3Q96Q77 187 aaPredicted RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 METTL26Q96S19 204 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 C7orf50Q9BRJ6 194 aaKnown RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 SRRQ9GZT4 340 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 MS4A6AQ9H2W1 248 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 RETNQ9HD89 108 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 MCUBQ9NWR8 336 aa2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 EPPK1P58107 5090 aaKnown RBP2.43□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGHV3OR16-8A0A075B7F1 116 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGHV3-49A0A0A0MS15 119 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 C9orf170A2RU37 121 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 CCDC160A6NGH7 325 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 FBLL1A6NHQ2 334 aaKnown RBP2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 FNDC10F2Z333 226 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 DNASE2O00115 360 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 CFDP00746 253 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 IFNA10P01566 189 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 FABP1P07148 127 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 RD3LP0DJH9 198 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR10J1P30954 320 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 P2RY1P47900 373 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 DEFB131AP59861 70 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 RAB11AP62491 216 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 PPP1R1AQ13522 171 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 GAMTQ14353 236 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 USF2Q15853 346 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 DEFB135Q30KP9 77 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 TIGITQ495A1 244 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 PYDC2Q56P42 97 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 C1orf194Q5T5A4 169 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 ZFAND6Q6FIF0 208 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 UFSP1Q6NVU6 142 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 MORN3Q6PF18 240 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 LYG2Q86SG7 212 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms