RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 NUTF2P61970 127 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 RHOBP62745 196 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 ZNF345Q14585 488 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 RBMY1FQ15415 496 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 ACOT6Q3I5F7 207 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 C1orf158Q8N1D5 194 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 KCNRGQ8N5I3 272 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 RNF141Q8WVD5 230 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 MRPL53Q96EL3 112 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 PHYHIPLQ96FC7 376 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 PAXXQ9BUH6 204 aa14.1□□□□□ -0.15
SHKBP1-221ENST00000599833 VPS13DQ5THJ4 4388 aa14.09□□□□□ -0.15
SHKBP1-221ENST00000599833 DUSP14O95147 198 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-221ENST00000599833 NBEAP1P0C6P0 100 aa14.09□□□□□ -0.15
SHKBP1-221ENST00000599833 CASC10Q5T4H9 136 aa14.09□□□□□ -0.15
SHKBP1-221ENST00000599833 EXOC3-AS1Q8N2X6 119 aa14.09□□□□□ -0.15
SHKBP1-221ENST00000599833 BLNKQ8WV28 456 aa14.09□□□□□ -0.15
SHKBP1-221ENST00000599833 C1QTNF4Q9BXJ3 329 aa14.09□□□□□ -0.15
SHKBP1-221ENST00000599833 SERF2P84101 59 aa14.08□□□□□ -0.16
SHKBP1-221ENST00000599833 HIST1H1AQ02539 215 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-221ENST00000599833 SSX7Q7RTT5 188 aa14.08□□□□□ -0.16
SHKBP1-221ENST00000599833 OR10G4Q8NGN3 311 aa14.08□□□□□ -0.16
SHKBP1-221ENST00000599833 OR10G9Q8NGN4 311 aa14.08□□□□□ -0.16
SHKBP1-221ENST00000599833 OR10G7Q8NGN6 311 aa14.08□□□□□ -0.16
SHKBP1-221ENST00000599833 IL17DQ8TAD2 202 aa14.08□□□□□ -0.16
SHKBP1-221ENST00000599833 IGHV4-28A0A0C4DH34 117 aa14.07□□□□□ -0.16
SHKBP1-221ENST00000599833 NPIPB6E9PJ23 425 aa14.07□□□□□ -0.16
SHKBP1-221ENST00000599833 M0R2Z0 102 aa14.07□□□□□ -0.16
SHKBP1-221ENST00000599833 SPINK13Q1W4C9 94 aa14.07□□□□□ -0.16
SHKBP1-221ENST00000599833 KHDC3LQ587J8 217 aa14.07□□□□□ -0.16
SHKBP1-221ENST00000599833 FAM122CQ6P4D5 195 aa14.07□□□□□ -0.16
SHKBP1-221ENST00000599833 TCTE3Q8IZS6 198 aa14.07□□□□□ -0.16
SHKBP1-221ENST00000599833 PLA2G2EQ9NZK7 142 aa14.07□□□□□ -0.16
SHKBP1-221ENST00000599833 DNAH6Q9C0G6 4158 aa14.07□□□□□ -0.16
SHKBP1-221ENST00000599833 TAAR5O14804 337 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 DEFB4AO15263 64 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 OR7C2O60412 319 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 JTBO76095 146 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 STAG3L2P0CL84 134 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 STAG3L3P0CL85 134 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 ZNF726P1Q15940 193 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 SUN5Q8TC36 379 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 IGF2BP2-AS1Q96M15 143 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 NEU1Q99519 415 aa14.06□□□□□ -0.16
SHKBP1-221ENST00000599833 BORCS7-ASMTA0A0B4J1R7 106 aa14.05□□□□□ -0.16
SHKBP1-221ENST00000599833 BOLA2-SMG1P6H3BVE0 249 aa14.05□□□□□ -0.16
SHKBP1-221ENST00000599833 MIFP14174 115 aa14.05□□□□□ -0.16
SHKBP1-221ENST00000599833 ICAM4Q14773 271 aa14.05□□□□□ -0.16
SHKBP1-221ENST00000599833 KIR3DS1Q14943 382 aa14.05□□□□□ -0.16
SHKBP1-221ENST00000599833 GNPNAT1Q96EK6 184 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-221ENST00000599833 FAM19A4Q96LR4 140 aa14.05□□□□□ -0.16
SHKBP1-221ENST00000599833 PRELID1Q9Y255 219 aa14.05□□□□□ -0.16
SHKBP1-221ENST00000599833 KMT2AQ03164 3969 aa14.05□□□□□ -0.16
SHKBP1-221ENST00000599833 HMGB3O15347 200 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-221ENST00000599833 CT45A10P0DMU9 189 aa14.04□□□□□ -0.16
SHKBP1-221ENST00000599833 CDC34P49427 236 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-221ENST00000599833 TAS2R45P59539 299 aa14.04□□□□□ -0.16
SHKBP1-221ENST00000599833 UBE2L3P68036 154 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-221ENST00000599833 ZFAND6Q6FIF0 208 aa14.04□□□□□ -0.16
SHKBP1-221ENST00000599833 PQLC2Q6ZP29 291 aa14.04□□□□□ -0.16
SHKBP1-221ENST00000599833 BAP18Q8IXM2 172 aa14.04□□□□□ -0.16
SHKBP1-221ENST00000599833 RAB24Q969Q5 203 aa14.04□□□□□ -0.16
SHKBP1-221ENST00000599833 TRAV12-2A0A075B6T6 113 aa14.03□□□□□ -0.16
SHKBP1-221ENST00000599833 ARPC5LQ9BPX5 153 aa14.03□□□□□ -0.16
SHKBP1-221ENST00000599833 Q9H3A6 140 aa14.03□□□□□ -0.16
SHKBP1-221ENST00000599833 A0A1B0GVG6 124 aa14.02□□□□□ -0.17
SHKBP1-221ENST00000599833 A0A1W2PPV4 95 aa14.02□□□□□ -0.17
SHKBP1-221ENST00000599833 MBP02144 154 aa14.02□□□□□ -0.17
SHKBP1-221ENST00000599833 AMBPP02760 352 aa14.02□□□□□ -0.17
SHKBP1-221ENST00000599833 ARL14EPLP0DKL9 152 aa14.02□□□□□ -0.17
SHKBP1-221ENST00000599833 CD300CQ08708 224 aa14.02□□□□□ -0.17
SHKBP1-221ENST00000599833 ERCC8Q13216 396 aa14.02□□□□□ -0.17
SHKBP1-221ENST00000599833 LYPD1Q8N2G4 141 aa14.02□□□□□ -0.17
SHKBP1-221ENST00000599833 ODF3Q96PU9 254 aa14.02□□□□□ -0.17
SHKBP1-221ENST00000599833 IGKV2-40A0A087WW87 121 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 A0A0D9SG52 128 aa14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 BCL2L11O43521 198 aa14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 IGKV2D-40P01614 121 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 PRM2P04554 102 aa14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 RANP62826 216 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 C9orf47Q6ZRZ4 202 aa14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 OR10J6PQ8NGY7 276 aa14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 AGPAT4-IT1Q9H0P7 198 aa14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 CELA1Q9UNI1 258 aa14.01□□□□□ -0.17
SHKBP1-221ENST00000599833 hCG_2014768A0A024R1R8 64 aa14□□□□□ -0.17
SHKBP1-221ENST00000599833 CDKN1BP46527 198 aa14□□□□□ -0.17
SHKBP1-221ENST00000599833 LGALSLQ3ZCW2 172 aaPredicted RBP14□□□□□ -0.17
SHKBP1-221ENST00000599833 VGLL1Q99990 258 aa14□□□□□ -0.17
SHKBP1-221ENST00000599833 AAMDCQ9H7C9 122 aa14□□□□□ -0.17
SHKBP1-221ENST00000599833 SMIM9A6NGZ8 99 aa13.99□□□□□ -0.17
SHKBP1-221ENST00000599833 INSP01308 110 aa13.99□□□□□ -0.17
SHKBP1-221ENST00000599833 C1QBP02746 253 aa13.99□□□□□ -0.17
SHKBP1-221ENST00000599833 GCHFRP30047 84 aa13.99□□□□□ -0.17
SHKBP1-221ENST00000599833 GFI1BQ5VTD9 330 aa13.99□□□□□ -0.17
SHKBP1-221ENST00000599833 TMUB2Q71RG4 321 aa13.99□□□□□ -0.17
SHKBP1-221ENST00000599833 GOLT1BQ9Y3E0 138 aa13.99□□□□□ -0.17
SHKBP1-221ENST00000599833 NANOS2P60321 138 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-221ENST00000599833 ACTR3CQ9C0K3 210 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-221ENST00000599833 IGHV3OR16-12A0A075B7B8 117 aa13.97□□□□□ -0.17
SHKBP1-221ENST00000599833 PLAC8L1A1L4L8 177 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms