RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 CCDC28AQ8IWP9 274 aa12.59□□□□□ -0.39
CIRBP-243ENST00000593128 DNAJC4Q9NNZ3 241 aa12.59□□□□□ -0.39
CIRBP-243ENST00000593128 UBE2L5PA0A1B0GUS4 154 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 H7BYZ3 331 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 PLA2G10O15496 165 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 TCRBP04435 133 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 CCL18P55774 89 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 FAM3BP58499 235 aaPredicted RBP12.58□□□□□ -0.4
CIRBP-243ENST00000593128 GFI1BQ5VTD9 330 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 TMEM263Q8WUH6 116 aaKnown RBP12.58□□□□□ -0.4
CIRBP-243ENST00000593128 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 S100ZQ8WXG8 99 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 NUDT15Q9NV35 164 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 PXMP4Q9Y6I8 212 aa12.58□□□□□ -0.4
CIRBP-243ENST00000593128 H3BQ15 152 aa12.57□□□□□ -0.4
CIRBP-243ENST00000593128 PVALBP20472 110 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-243ENST00000593128 BAXQ07812 192 aa12.57□□□□□ -0.4
CIRBP-243ENST00000593128 ZNF493Q6ZR52 646 aa12.57□□□□□ -0.4
CIRBP-243ENST00000593128 RNASE8Q8TDE3 154 aaKnown RBP12.57□□□□□ -0.4
CIRBP-243ENST00000593128 ZNF431Q8TF32 576 aaPredicted RBP12.57□□□□□ -0.4
CIRBP-243ENST00000593128 UQCC1Q9NVA1 299 aa12.57□□□□□ -0.4
CIRBP-243ENST00000593128 TRAV12-3A0A0B4J271 114 aa12.56□□□□□ -0.4
CIRBP-243ENST00000593128 GAGE12BA1L429 117 aa12.56□□□□□ -0.4
CIRBP-243ENST00000593128 GAGE7O76087 117 aa12.56□□□□□ -0.4
CIRBP-243ENST00000593128 GAGE12FP0CL80 117 aa12.56□□□□□ -0.4
CIRBP-243ENST00000593128 GAGE12GP0CL81 117 aa12.56□□□□□ -0.4
CIRBP-243ENST00000593128 GAGE12IP0CL82 117 aa12.56□□□□□ -0.4
CIRBP-243ENST00000593128 IGLC2P0DOY2 106 aa12.56□□□□□ -0.4
CIRBP-243ENST00000593128 C12orf45Q8N5I9 185 aaPredicted RBP12.56□□□□□ -0.4
CIRBP-243ENST00000593128 OR1L4Q8NGR5 311 aa12.56□□□□□ -0.4
CIRBP-243ENST00000593128 DNAH11Q96DT5 4516 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 A0A0J9YY99 117 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 NBDYA0A0U1RRE5 68 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 SNURFLB1AK76 121 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 RLN2P04090 185 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 LEPP41159 167 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 ZNRF2Q8NHG8 242 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 C2orf50Q96LR7 162 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 PFDN5Q99471 154 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 WDR83OSQ9Y284 106 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 LINC00588Q9Y4M8 146 aa12.55□□□□□ -0.4
CIRBP-243ENST00000593128 TRAV26-1A0A087WT03 109 aa12.54□□□□□ -0.4
CIRBP-243ENST00000593128 H2AFB2P0C5Z0 115 aa12.54□□□□□ -0.4
CIRBP-243ENST00000593128 CT45A10P0DMU9 189 aa12.54□□□□□ -0.4
CIRBP-243ENST00000593128 FGF7P21781 194 aa12.54□□□□□ -0.4
CIRBP-243ENST00000593128 TNP2Q05952 138 aa12.54□□□□□ -0.4
CIRBP-243ENST00000593128 SSX7Q7RTT5 188 aa12.54□□□□□ -0.4
CIRBP-243ENST00000593128 GNPNAT1Q96EK6 184 aaPredicted RBP12.54□□□□□ -0.4
CIRBP-243ENST00000593128 C20orf144Q9BQM9 153 aa12.54□□□□□ -0.4
CIRBP-243ENST00000593128 IGSF23A1L1A6 192 aa12.53□□□□□ -0.4
CIRBP-243ENST00000593128 ERCC8Q13216 396 aa12.53□□□□□ -0.4
CIRBP-243ENST00000593128 GUK1Q16774 197 aa12.53□□□□□ -0.4
CIRBP-243ENST00000593128 STX12Q86Y82 276 aa12.53□□□□□ -0.4
CIRBP-243ENST00000593128 C6orf223Q8N319 242 aa12.53□□□□□ -0.4
CIRBP-243ENST00000593128 SAT2Q96F10 170 aaPredicted RBP12.53□□□□□ -0.4
CIRBP-243ENST00000593128 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
CIRBP-243ENST00000593128 SLC39A9Q9NUM3 307 aa12.53□□□□□ -0.4
CIRBP-243ENST00000593128 ZNF586Q9NXT0 402 aa12.53□□□□□ -0.4
CIRBP-243ENST00000593128 S100A11P31949 105 aa12.52□□□□□ -0.41
CIRBP-243ENST00000593128 SULT1A1P50225 295 aa12.52□□□□□ -0.41
CIRBP-243ENST00000593128 HBG1P69891 147 aa12.52□□□□□ -0.41
CIRBP-243ENST00000593128 HBG2P69892 147 aa12.52□□□□□ -0.41
CIRBP-243ENST00000593128 RAB32Q13637 225 aa12.52□□□□□ -0.41
CIRBP-243ENST00000593128 BLNKQ8WV28 456 aa12.52□□□□□ -0.41
CIRBP-243ENST00000593128 LYRM2Q9NU23 88 aaPredicted RBP12.52□□□□□ -0.41
CIRBP-243ENST00000593128 TIMM9Q9Y5J7 89 aa12.52□□□□□ -0.41
CIRBP-243ENST00000593128 FAM240BA0A1B0GVZ2 78 aa12.51□□□□□ -0.41
CIRBP-243ENST00000593128 C16orf90A8MZG2 172 aa12.51□□□□□ -0.41
CIRBP-243ENST00000593128 M0R3E3 92 aa12.51□□□□□ -0.41
CIRBP-243ENST00000593128 M6PRP20645 277 aa12.51□□□□□ -0.41
CIRBP-243ENST00000593128 TMEM252Q8N6L7 170 aa12.51□□□□□ -0.41
CIRBP-243ENST00000593128 C11orf1Q9H5F2 150 aa12.51□□□□□ -0.41
CIRBP-243ENST00000593128 NPIPB6E9PJ23 425 aa12.5□□□□□ -0.41
CIRBP-243ENST00000593128 PYYP10082 97 aa12.5□□□□□ -0.41
CIRBP-243ENST00000593128 HOXA5P20719 270 aa12.5□□□□□ -0.41
CIRBP-243ENST00000593128 RPL29P47914 159 aaKnown RBP12.5□□□□□ -0.41
CIRBP-243ENST00000593128 CCDC32Q9BV29 185 aa12.5□□□□□ -0.41
CIRBP-243ENST00000593128 TMPRSS5Q9H3S3 457 aa12.5□□□□□ -0.41
CIRBP-243ENST00000593128 RYR1P21817 5038 aa12.5□□□□□ -0.41
CIRBP-243ENST00000593128 TRBV19A0A075B6N1 114 aa12.49□□□□□ -0.41
CIRBP-243ENST00000593128 VWC2Q2TAL6 325 aa12.49□□□□□ -0.41
CIRBP-243ENST00000593128 Q6ZTI0 123 aa12.49□□□□□ -0.41
CIRBP-243ENST00000593128 EXOC3-AS1Q8N2X6 119 aa12.49□□□□□ -0.41
CIRBP-243ENST00000593128 RXFP4Q8TDU9 374 aa12.49□□□□□ -0.41
CIRBP-243ENST00000593128 PYGO2Q9BRQ0 406 aa12.49□□□□□ -0.41
CIRBP-243ENST00000593128 Q9H8V8 135 aa12.49□□□□□ -0.41
CIRBP-243ENST00000593128 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
CIRBP-243ENST00000593128 C7orf71A4D174 169 aa12.48□□□□□ -0.41
CIRBP-243ENST00000593128 RNASE4P34096 147 aaKnown RBP12.48□□□□□ -0.41
CIRBP-243ENST00000593128 BTN1A1Q13410 526 aa12.48□□□□□ -0.41
CIRBP-243ENST00000593128 GCSAMLQ5JQS6 135 aa12.48□□□□□ -0.41
CIRBP-243ENST00000593128 MZT2BQ6NZ67 158 aa12.48□□□□□ -0.41
CIRBP-243ENST00000593128 THAP6Q8TBB0 222 aa12.48□□□□□ -0.41
CIRBP-243ENST00000593128 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
CIRBP-243ENST00000593128 GSN-AS1Q9NRJ2 163 aa12.48□□□□□ -0.41
CIRBP-243ENST00000593128 HIST1H1EP10412 219 aaKnown RBP12.47□□□□□ -0.41
CIRBP-243ENST00000593128 FAM122CQ6P4D5 195 aa12.47□□□□□ -0.41
CIRBP-243ENST00000593128 MUC4Q99102 2169 aa12.47□□□□□ -0.41
CIRBP-243ENST00000593128 ABCA13Q86UQ4 5058 aa12.46□□□□□ -0.41
CIRBP-243ENST00000593128 TRGV1A0A0A0MS02 117 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms