RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 FAM223BA6NKX1 122 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 PANO1I0J062 215 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 CORTO00230 105 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 NDUFS6O75380 124 aaKnown RBP3.4□□□□□ -1.87
ERCC1-216ENST00000592444 CLN5O75503 358 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 GYPEP15421 78 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 AP2S1P53680 142 aaPredicted RBP3.4□□□□□ -1.87
ERCC1-216ENST00000592444 RAB2AP61019 212 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 RHOGP84095 191 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 SERF2P84101 59 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 ZNF90Q03938 601 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 SPATA31B1PQ5VZV4 182 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 MIC13Q5XKP0 118 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 Q6ZRN7 208 aaPredicted RBP3.4□□□□□ -1.87
ERCC1-216ENST00000592444 FAM223AQ8IWN6 122 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 HSD17B11Q8NBQ5 300 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 OR10P1Q8NGE3 313 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 OR1L6Q8NGR2 347 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 MBD3L1Q8WWY6 194 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 SAT2Q96F10 170 aaPredicted RBP3.4□□□□□ -1.87
ERCC1-216ENST00000592444 SLC25A32Q9H2D1 315 aa3.4□□□□□ -1.87
ERCC1-216ENST00000592444 MRPL27Q9P0M9 148 aaKnown RBP3.4□□□□□ -1.87
ERCC1-216ENST00000592444 PEF1Q9UBV8 284 aaKnown RBP3.4□□□□□ -1.87
ERCC1-216ENST00000592444 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 A8MWP6 167 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 UMAD1C9J7I0 102 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 C9JQL5 133 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 H3BRN7 92 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 OR2J3O76001 311 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 TOMM40O96008 361 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 CA1P00915 261 aaPredicted RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 IGHV3-48P01763 117 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 CD5P06127 495 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 STAG3L2P0CL84 134 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 STAG3L3P0CL85 134 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 MIFP14174 115 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 ADCYAP1P18509 176 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 FGF7P21781 194 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 GATA2P23769 480 aaPredicted RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 OR10J1P30954 320 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 CAMLGP49069 296 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 YPEL3P61236 119 aaPredicted RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 RAB11AP62491 216 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 VAMP2P63027 116 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 CCL20P78556 96 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 ERHP84090 104 aaKnown RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 USF2Q15853 346 aaPredicted RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 C15orf32Q32M92 178 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 ODF3L2Q3SX64 289 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 TTC32Q5I0X7 151 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 TOR2AQ5JU69 321 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 PXDC1Q5TGL8 231 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 UNQ5815/PRO19632Q6UWF5 114 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 DPPA3Q6W0C5 159 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 CYP2G1PQ6ZSU1 146 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 GPHB5Q86YW7 130 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 LILRB2Q8N423 598 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 PCNPQ8WW12 178 aaKnown RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 NPIPB3Q92617 1050 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 GNPNAT1Q96EK6 184 aaPredicted RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 DAZAP1Q96EP5 407 aaKnown RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 SLC35E1Q96K37 410 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 TXN2Q99757 166 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 HINT2Q9BX68 163 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 NPVFQ9HCQ7 196 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 SEPSECSQ9HD40 501 aaKnown RBP3.39□□□□□ -1.87
ERCC1-216ENST00000592444 SLC39A9Q9NUM3 307 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 PXMP4Q9Y6I8 212 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 COX11Q9Y6N1 276 aa3.39□□□□□ -1.87
ERCC1-216ENST00000592444 A0A087WTM6 91 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 CTXND1A0A1B0GTU2 59 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 EIF3GO75821 320 aaKnown RBP eCLIP3.38□□□□□ -1.87
ERCC1-216ENST00000592444 IFNA7P01567 189 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 IGLC2P0DOY2 106 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 PSG1P11464 419 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 HIST1H1BP16401 226 aaKnown RBP3.38□□□□□ -1.87
ERCC1-216ENST00000592444 M6PRP20645 277 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 RAB5CP51148 216 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 PTTG1IPP53801 180 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 ELLP55199 621 aaPredicted RBP3.38□□□□□ -1.87
ERCC1-216ENST00000592444 LINC00315P59091 139 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 B2MP61769 119 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 SELENOTP62341 195 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 PLGLAQ15195 96 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 TIGITQ495A1 244 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 TMEM41BQ5BJD5 291 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 C10orf91Q5T1B1 145 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 TMEM88Q6PEY1 159 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 UNQ9165/PRO28630Q6UXU0 137 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 Q6ZRG5 221 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 CCDC28AQ8IWP9 274 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 OR5T1Q8NG75 326 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 TMEM190Q8WZ59 177 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 CLUHP3Q96NS8 147 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 SLC25A2Q9BXI2 301 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 Q9H3A6 140 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 Q9H8V8 135 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 C21orf62Q9NYP8 219 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 MLXQ9UH92 298 aa3.38□□□□□ -1.87
ERCC1-216ENST00000592444 LINC00588Q9Y4M8 146 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms