RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	SLC25A2	Q9BXI2	301 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	PARD6G	Q9BYG4	376 aa	Predicted RBP	6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	PPP1R14D	Q9NXH3	145 aa		6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	KLK5	Q9Y337	293 aa	Predicted RBP	6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	PLEC	Q15149	4684 aa	Known RBP	6.62	□□□□□ -1.35
DNMT1-223	ENST00000591239	TMEM189	A5PLL7	270 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	PRAC2	D3DTV9	90 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	BOLA2-SMG1P6	H3BVE0	249 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	CRX	O43186	299 aa	Predicted RBP	6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	JTB	O76095	146 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	NDUFB4	O95168	129 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	PDE6H	Q13956	83 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	BAP18	Q8IXM2	172 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	OR10J6P	Q8NGY7	276 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	BLNK	Q8WV28	456 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	AQP10	Q96PS8	301 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	TMEM208	Q9BTX3	173 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	MRPL32	Q9BYC8	188 aa	Known RBP	6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	CELA1	Q9UNI1	258 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	FUT9	Q9Y231	359 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	TIMM9	Q9Y5J7	89 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	RFNG	Q9Y644	331 aa		6.61	□□□□□ -1.35
DNMT1-223	ENST00000591239	SACS	Q9NZJ4	4579 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	TRAV12-2	A0A075B6T6	113 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	INS	P01308	110 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	HBE1	P02100	147 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	NBEAP1	P0C6P0	100 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	EMP1	P54849	157 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	RRN3P1	Q2M238	152 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	RNF141	Q8WVD5	230 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	MRPL53	Q96EL3	112 aa	Known RBP	6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	PAXX	Q9BUH6	204 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	OR51M1	Q9H341	326 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	PRELID1	Q9Y255	219 aa		6.6	□□□□□ -1.35
DNMT1-223	ENST00000591239	LOC102723971	A0A1B0GUV8	181 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	C11orf94	C9JXX5	98 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239		M0R3E3	92 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	OR7C2	O60412	319 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	OR10J4	P0C629	311 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	SPART-AS1	P0CW21	52 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	CDKN1B	P46527	198 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	ZNF266	Q14584	549 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	C12orf74	Q32Q52	190 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	ACOT6	Q3I5F7	207 aa	Predicted RBP	6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239		Q6ZTC4	211 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	EXOC3-AS1	Q8N2X6	119 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	RPP25L	Q8N5L8	163 aa	Known RBP	6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	INO80E	Q8NBZ0	244 aa	Predicted RBP	6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	OR2T35	Q8NGX2	323 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	FXYD5	Q96DB9	178 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	AAMDC	Q9H7C9	122 aa		6.59	□□□□□ -1.35
DNMT1-223	ENST00000591239	FXYD6-FXYD2	A0A087WZ82	144 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	ZNF705G	A8MUZ8	300 aa	Predicted RBP	6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	NPIPB6	E9PJ23	425 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	PRM2	P04554	102 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	CT45A10	P0DMU9	189 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	M6PR	P20645	277 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	TSPO	P30536	169 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	TAS2R45	P59539	299 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	ICAM4	Q14773	271 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	KHDC3L	Q587J8	217 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	ZNF767P	Q75MW2	155 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	TMEM256	Q8N2U0	113 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	C2CD4C	Q8TF44	421 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	ZNF503	Q96F45	646 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	LINC01587	Q99440	93 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	DKK2	Q9UBU2	259 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	TNFSF18	Q9UNG2	199 aa		6.58	□□□□□ -1.36
DNMT1-223	ENST00000591239	TRAV10	A0A0B4J240	114 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	TEX48	A0A1B0GUV7	120 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239		A0A1W2PPV4	95 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	RNF222	A6NCQ9	220 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	IGLL5	B9A064	214 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	EIF4EBP3	O60516	100 aa	Predicted RBP	6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	EIF3G	O75821	320 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	RAB2A	P61019	212 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	ERCC8	Q13216	396 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	KIR3DS1	Q14943	382 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	FAM222A	Q5U5X8	452 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	FAM122C	Q6P4D5	195 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	HSD17B11	Q8NBQ5	300 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	OR10G4	Q8NGN3	311 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	OR10G9	Q8NGN4	311 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	OR10G7	Q8NGN6	311 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	LINC00476	Q8WZB0	136 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	PHYHIPL	Q96FC7	376 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	LINC00477	Q96M19	166 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	ODF3	Q96PU9	254 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	YTHDF2	Q9Y5A9	579 aa	Known RBP	6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	ALMS1	Q8TCU4	4167 aa		6.57	□□□□□ -1.36
DNMT1-223	ENST00000591239	RYR2	Q92736	4967 aa		6.56	□□□□□ -1.36
DNMT1-223	ENST00000591239	DNAH1	Q9P2D7	4330 aa		6.56	□□□□□ -1.36
DNMT1-223	ENST00000591239	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	6.56	□□□□□ -1.36
DNMT1-223	ENST00000591239	DEFB131B	A0A096LNP1	70 aa		6.56	□□□□□ -1.36
DNMT1-223	ENST00000591239		G3V3Q6	166 aa		6.56	□□□□□ -1.36
DNMT1-223	ENST00000591239		J3KRW8	73 aa		6.56	□□□□□ -1.36
DNMT1-223	ENST00000591239	LY6G6C	O95867	125 aa		6.56	□□□□□ -1.36
DNMT1-223	ENST00000591239	IGKV2D-40	P01614	121 aa	Predicted RBP	6.56	□□□□□ -1.36
DNMT1-223	ENST00000591239	HTN1	P15515	57 aa		6.56	□□□□□ -1.36
DNMT1-223	ENST00000591239	AZU1	P20160	251 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms