RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 BAGE2Q86Y30 109 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 ZFP82Q8N141 532 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 RNF152Q8N8N0 203 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 C11orf44Q8N8P7 122 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 METTL26Q96S19 204 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 CITED1Q99966 193 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 PRSS22Q9GZN4 317 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 NPFFR1Q9GZQ6 430 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 C16orf95Q9H693 158 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 ZNF492Q9P255 531 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 NBEAL1Q6ZS30 2694 aa7.2□□□□□ -1.26
VPS25-205ENST00000590339 IGHV3OR16-8A0A075B7F1 116 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 DIRC3C9JPN6 131 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 FAM3BP58499 235 aaPredicted RBP7.19□□□□□ -1.26
VPS25-205ENST00000590339 ERVFC1-1P60608 527 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 IBA57Q5T440 356 aaKnown RBP7.19□□□□□ -1.26
VPS25-205ENST00000590339 C16orf54Q6UWD8 224 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 GOLT1AQ6ZVE7 132 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 OR8I2Q8N0Y5 310 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 NHLRC2Q8NBF2 726 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 CMTM2Q8TAZ6 248 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 GLMPQ8WWB7 406 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 RNASE7Q9H1E1 156 aaKnown RBP7.19□□□□□ -1.26
VPS25-205ENST00000590339 ZNF331Q9NQX6 463 aaPredicted RBP7.19□□□□□ -1.26
VPS25-205ENST00000590339 BIN3Q9NQY0 253 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 RPH3ALQ9UNE2 315 aa7.19□□□□□ -1.26
VPS25-205ENST00000590339 SMIM27A0A1W2PRY6 76 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 C19orf71A6NCJ1 209 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 M0QZ24 198 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 M0R3E3 92 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 IGHV3-11P01762 117 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 APOHP02749 345 aaPredicted RBP7.18□□□□□ -1.26
VPS25-205ENST00000590339 TRGC2P03986 189 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 MGST1P10620 155 aaKnown RBP7.18□□□□□ -1.26
VPS25-205ENST00000590339 MEOX2P50222 304 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 FOXE3Q13461 319 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 PSG3Q16557 428 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 RPEL1Q2QD12 228 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 ACTL10Q5JWF8 245 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 UNQ9165/PRO28630Q6UXU0 137 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 LCNL1Q6ZST4 164 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 TMEM183AQ8IXX5 376 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 OR4X2Q8NGF9 303 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 SLC50A1Q9BRV3 221 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 AAMDCQ9H7C9 122 aa7.18□□□□□ -1.26
VPS25-205ENST00000590339 TRAV8-1A0A0A6YYK1 113 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 C5orf52A6NGY3 159 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 FBLL1A6NHQ2 334 aaKnown RBP7.17□□□□□ -1.26
VPS25-205ENST00000590339 NPIPB6E9PJ23 425 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 K7EQM0 130 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 WIPF1O43516 503 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST1H2BKO60814 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST1H2BJP06899 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 ELANEP08246 267 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST1H2BOP23527 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST1H2BBP33778 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST1H2BDP58876 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST1H2BCP62807 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 DEFA6Q01524 100 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST2H2BEQ16778 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 CT83Q5H943 113 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.17□□□□□ -1.26
VPS25-205ENST00000590339 C10orf99Q6UWK7 81 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 COX8CQ7Z4L0 72 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 FRZBQ92765 325 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST1H2BHQ93079 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 MRPL53Q96EL3 112 aaKnown RBP7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST1H2BNQ99877 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 HIST1H2BMQ99879 126 aa7.17□□□□□ -1.26
VPS25-205ENST00000590339 TRAV8-2A0A0B4J237 113 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 ZNF785A8K8V0 405 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 UBE2CO00762 179 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 CHEK1O14757 476 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 ZNF207O43670 478 aaKnown RBP7.16□□□□□ -1.26
VPS25-205ENST00000590339 GATCO43716 136 aaKnown RBP7.16□□□□□ -1.26
VPS25-205ENST00000590339 SLC35B1P78383 322 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 LINC00322Q6ZN03 302 aaPredicted RBP7.16□□□□□ -1.26
VPS25-205ENST00000590339 KLHDC1Q8N7A1 406 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 NUDT10Q8NFP7 164 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 NUDT11Q96G61 164 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 GRAMD2BQ96HH9 432 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 SGK494Q96LW2 274 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 SERTAD4Q9NUC0 356 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 PEF1Q9UBV8 284 aaKnown RBP7.16□□□□□ -1.26
VPS25-205ENST00000590339 PSG8Q9UQ74 426 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 ZFP30Q9Y2G7 519 aa7.16□□□□□ -1.26
VPS25-205ENST00000590339 ZNF705GA8MUZ8 300 aaPredicted RBP7.15□□□□□ -1.26
VPS25-205ENST00000590339 K7EMT4 169 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 SOCS3O14543 225 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
VPS25-205ENST00000590339 LGALS1P09382 135 aaKnown RBP7.15□□□□□ -1.26
VPS25-205ENST00000590339 TRGC1P0CF51 173 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 HLA-DMBP28068 263 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 CSN1S1P47710 185 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 REC114Q7Z4M0 266 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 PRNTQ86SH4 94 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 GPHB5Q86YW7 130 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 GBGT1Q8N5D6 347 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms