RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 TRAV17A0A0B4J275 112 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 IGKV1D-13A0A0B4J2D9 117 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 C17orf100A8MU93 164 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 C4orf51C9J302 202 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 LY6LH3BQJ8 138 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 CDX4O14627 284 aaPredicted RBP4.75□□□□□ -1.65
SMAD4-203ENST00000585448 P0C879 139 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 IGKV1-13P0DP09 117 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 PYYP10082 97 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 CA6P23280 308 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 COL8A2P25067 703 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 FCER1GP30273 86 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 ZNF56Q15929 161 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 C9orf47Q6ZRZ4 202 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 IL17RELQ6ZVW7 336 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 FGFRL1Q8N441 504 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 C9orf106Q8NAJ2 232 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 BMFQ96LC9 184 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 HHLA3Q9XRX5 114 aa4.75□□□□□ -1.65
SMAD4-203ENST00000585448 KLF13Q9Y2Y9 288 aaPredicted RBP4.75□□□□□ -1.65
SMAD4-203ENST00000585448 TRAV12-2A0A075B6T6 113 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 A0A096LNJ9 63 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 IGKV2D-26A0A0A0MRZ7 120 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 TRBV10-2A0A0K0K1G8 114 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-203ENST00000585448 TMEM89A2RUT3 159 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 C19orf71A6NCJ1 209 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 H3BT86 120 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 HSPB6O14558 160 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 IGKV1D-16P01601 117 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 P01737 135 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 GP1BBP13224 206 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 CRYGSP22914 178 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 CCL8P80075 99 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 ATXN8Q156A1 80 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 TMEM155Q4W5P6 130 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 MIC13Q5XKP0 118 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 C22orf39Q6P5X5 142 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 C11orf53Q8IXP5 236 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 ZNF441Q8N8Z8 693 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 SAP25Q8TEE9 199 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 BORCS8Q96FH0 119 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 C2orf48Q96LS8 159 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 SHANK2-AS3Q9BTD1 123 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 NXT2Q9NPJ8 142 aaKnown RBP4.74□□□□□ -1.65
SMAD4-203ENST00000585448 DEPPQ9NTK1 212 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 KLK5Q9Y337 293 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-203ENST00000585448 TIMM8BQ9Y5J9 83 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-203ENST00000585448 U3KQK5 164 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 EML5Q05BV3 1969 aa4.74□□□□□ -1.65
SMAD4-203ENST00000585448 DOCK11Q5JSL3 2073 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 TMSB15BA0A087X1C1 80 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 IGKV1-8A0A0C4DH67 115 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 A0A1B0GUT8 65 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 WI2-2373I1.2A0A1W2PRP0 233 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 LINC01546A6NGU7 62 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 SRRM4A7MD48 611 aaKnown RBP4.73□□□□□ -1.65
SMAD4-203ENST00000585448 EPM2AB3EWF7 344 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 TMEM150CB9EJG8 249 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 H7C1H1 209 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 PEX7O00628 323 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 ZFAND5O76080 213 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 PLNP26678 52 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 NBL1P41271 181 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 ZNF138P52744 262 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 IZUMO4Q1ZYL8 232 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 KRTAP27-1Q3LI81 207 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 ZC2HC1BQ5TFG8 222 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 ZFP2Q6ZN57 461 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 LINC00596Q86U02 117 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 EXOC3-AS1Q8N2X6 119 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 PGLYRP4Q96LB8 373 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 FAM19A4Q96LR4 140 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 CALYQ9NYX4 217 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 LAMTOR3Q9UHA4 124 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 LINC00527Q9UJ94 153 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 AMMECR1Q9Y4X0 333 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-203ENST00000585448 LSM4Q9Y4Z0 139 aaKnown RBP4.73□□□□□ -1.65
SMAD4-203ENST00000585448 SERP1Q9Y6X1 66 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 SCN3AQ9NY46 2000 aa4.73□□□□□ -1.65
SMAD4-203ENST00000585448 SMIM26A0A096LP01 95 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 LINC00271P0C7V0 271 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 DEFA4P12838 97 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 SSR4P51571 173 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 EFNA4P52798 201 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 LINC00205P59089 165 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 CD164Q04900 197 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 PAX8Q06710 450 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 ZNF672Q499Z4 452 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-203ENST00000585448 LINC01620Q4KN68 170 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 FOXL2NBQ6ZUU3 175 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 C5orf38Q86SI9 138 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 NDUFA11Q86Y39 141 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 C1orf158Q8N1D5 194 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 NABP1Q96AH0 204 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 CACNA1IQ9P0X4 2223 aa4.72□□□□□ -1.65
SMAD4-203ENST00000585448 hADV29S1A0JD25 119 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 PGPA6NDG6 321 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms