RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	M6PR	P20645	277 aa		11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908	SPINK13	Q1W4C9	94 aa		11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908	PAXX	Q9BUH6	204 aa		11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908	GOLT1B	Q9Y3E0	138 aa		11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908	RYR3	Q15413	4870 aa		11.7	□□□□□ -0.54
ERBB2-222	ENST00000584908	FXYD6-FXYD2	A0A087WZ82	144 aa		11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	TMEM189	A5PLL7	270 aa		11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	NPIPB6	E9PJ23	425 aa		11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	INS	P01308	110 aa		11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	NANOS2	P60321	138 aa	Known RBP	11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	PMS2P11	Q13670	270 aa		11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	KHDC3L	Q587J8	217 aa		11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	OR10J6P	Q8NGY7	276 aa		11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	RNF141	Q8WVD5	230 aa		11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	ODF3	Q96PU9	254 aa		11.69	□□□□□ -0.54
ERBB2-222	ENST00000584908	SACS	Q9NZJ4	4579 aa		11.68	□□□□□ -0.54
ERBB2-222	ENST00000584908		M0R3E3	92 aa		11.68	□□□□□ -0.54
ERBB2-222	ENST00000584908	CDKN1B	P46527	198 aa		11.68	□□□□□ -0.54
ERBB2-222	ENST00000584908	TAS2R45	P59539	299 aa		11.68	□□□□□ -0.54
ERBB2-222	ENST00000584908	SERF2	P84101	59 aa		11.68	□□□□□ -0.54
ERBB2-222	ENST00000584908	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.68	□□□□□ -0.54
ERBB2-222	ENST00000584908	BLNK	Q8WV28	456 aa		11.68	□□□□□ -0.54
ERBB2-222	ENST00000584908	LCE6A	A0A183	80 aa		11.67	□□□□□ -0.54
ERBB2-222	ENST00000584908	OR7C2	O60412	319 aa		11.67	□□□□□ -0.54
ERBB2-222	ENST00000584908	OR10J4	P0C629	311 aa		11.67	□□□□□ -0.54
ERBB2-222	ENST00000584908	ATP6V0C	P27449	155 aa		11.67	□□□□□ -0.54
ERBB2-222	ENST00000584908	BAP18	Q8IXM2	172 aa		11.67	□□□□□ -0.54
ERBB2-222	ENST00000584908	LYPD1	Q8N2G4	141 aa		11.67	□□□□□ -0.54
ERBB2-222	ENST00000584908	EXOC3-AS1	Q8N2X6	119 aa		11.67	□□□□□ -0.54
ERBB2-222	ENST00000584908	HSD17B11	Q8NBQ5	300 aa		11.67	□□□□□ -0.54
ERBB2-222	ENST00000584908	AAMDC	Q9H7C9	122 aa		11.67	□□□□□ -0.54
ERBB2-222	ENST00000584908	IGHV3OR16-12	A0A075B7B8	117 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	HBE1	P02100	147 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	PRB4	P10163	310 aa	Predicted RBP	11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	RAB2A	P61019	212 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	PQLC2	Q6ZP29	291 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	TMEM256	Q8N2U0	113 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	OR10G4	Q8NGN3	311 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	OR10G9	Q8NGN4	311 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	OR10G7	Q8NGN6	311 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	PHYHIPL	Q96FC7	376 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	C20orf144	Q9BQM9	153 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	PPP1R14D	Q9NXH3	145 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	CELA1	Q9UNI1	258 aa		11.66	□□□□□ -0.54
ERBB2-222	ENST00000584908	TRAV12-2	A0A075B6T6	113 aa		11.65	□□□□□ -0.54
ERBB2-222	ENST00000584908	C11orf94	C9JXX5	98 aa		11.65	□□□□□ -0.54
ERBB2-222	ENST00000584908	CT45A10	P0DMU9	189 aa		11.65	□□□□□ -0.54
ERBB2-222	ENST00000584908	TSPO	P30536	169 aa		11.65	□□□□□ -0.54
ERBB2-222	ENST00000584908	UBE2L3	P68036	154 aa	Known RBP	11.65	□□□□□ -0.54
ERBB2-222	ENST00000584908	ICAM4	Q14773	271 aa		11.65	□□□□□ -0.54
ERBB2-222	ENST00000584908	RPL7L1	Q6DKI1	246 aa	Known RBP	11.65	□□□□□ -0.54
ERBB2-222	ENST00000584908	RPP25L	Q8N5L8	163 aa	Known RBP	11.65	□□□□□ -0.54
ERBB2-222	ENST00000584908	KLK5	Q9Y337	293 aa	Predicted RBP	11.65	□□□□□ -0.54
ERBB2-222	ENST00000584908	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908		A0A1W2PPV4	95 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	TAAR5	O14804	337 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	MB	P02144	154 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	RRN3P1	Q2M238	152 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	C9orf47	Q6ZRZ4	202 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	FAM19A4	Q96LR4	140 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	LINC00477	Q96M19	166 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	TMEM208	Q9BTX3	173 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	RYR2	Q92736	4967 aa		11.64	□□□□□ -0.55
ERBB2-222	ENST00000584908	TEX48	A0A1B0GUV7	120 aa		11.63	□□□□□ -0.55
ERBB2-222	ENST00000584908	LOC102723971	A0A1B0GUV8	181 aa		11.63	□□□□□ -0.55
ERBB2-222	ENST00000584908	ARPC5	O15511	151 aa		11.63	□□□□□ -0.55
ERBB2-222	ENST00000584908	ZNF345	Q14585	488 aa		11.63	□□□□□ -0.55
ERBB2-222	ENST00000584908	C12orf74	Q32Q52	190 aa		11.63	□□□□□ -0.55
ERBB2-222	ENST00000584908	FAM122C	Q6P4D5	195 aa		11.63	□□□□□ -0.55
ERBB2-222	ENST00000584908	AGPAT4-IT1	Q9H0P7	198 aa		11.63	□□□□□ -0.55
ERBB2-222	ENST00000584908	SH3BGRL3	Q9H299	93 aa		11.63	□□□□□ -0.55
ERBB2-222	ENST00000584908	DNAH1	Q9P2D7	4330 aa		11.63	□□□□□ -0.55
ERBB2-222	ENST00000584908	HMSD	A8MTL9	139 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	SMLR1	H3BR10	107 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	JTB	O76095	146 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	STAG3L2	P0CL84	134 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	STAG3L3	P0CL85	134 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	SPART-AS1	P0CW21	52 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	LEP	P41159	167 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	CDC34	P49427	236 aa	Predicted RBP	11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	TAS2R60	P59551	318 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	RAN	P62826	216 aa	Known RBP	11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	KIR3DS1	Q14943	382 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908		Q6ZTC4	211 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	SUN5	Q8TC36	379 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908		Q9H3A6	140 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	CYTL1	Q9NRR1	136 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	DKK2	Q9UBU2	259 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	ALMS1	Q8TCU4	4167 aa		11.62	□□□□□ -0.55
ERBB2-222	ENST00000584908	RBAKDN	A6NC62	111 aa		11.61	□□□□□ -0.55
ERBB2-222	ENST00000584908		H7BYZ3	331 aa		11.61	□□□□□ -0.55
ERBB2-222	ENST00000584908	SLC25A5	P05141	298 aa	Known RBP	11.61	□□□□□ -0.55
ERBB2-222	ENST00000584908	NMB	P08949	121 aa		11.61	□□□□□ -0.55
ERBB2-222	ENST00000584908	CRISP2	P16562	243 aa		11.61	□□□□□ -0.55
ERBB2-222	ENST00000584908	ERCC8	Q13216	396 aa		11.61	□□□□□ -0.55
ERBB2-222	ENST00000584908	GFI1B	Q5VTD9	330 aa		11.61	□□□□□ -0.55
ERBB2-222	ENST00000584908	ARL6IP6	Q8N6S5	226 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms