RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 OXA1LQ15070 435 aa15.24■□□□□ 0.03
PPP4R1-228ENST00000584074 GUK1Q16774 197 aa15.24■□□□□ 0.03
PPP4R1-228ENST00000584074 GCSAMLQ5JQS6 135 aa15.24■□□□□ 0.03
PPP4R1-228ENST00000584074 LINC01587Q99440 93 aa15.24■□□□□ 0.03
PPP4R1-228ENST00000584074 SLC25A31Q9H0C2 315 aa15.24■□□□□ 0.03
PPP4R1-228ENST00000584074 DEFA1P59665 94 aa15.23■□□□□ 0.03
PPP4R1-228ENST00000584074 DEFA3P59666 94 aa15.23■□□□□ 0.03
PPP4R1-228ENST00000584074 DAD1P61803 113 aa15.23■□□□□ 0.03
PPP4R1-228ENST00000584074 CYCSP99999 105 aaKnown RBP15.23■□□□□ 0.03
PPP4R1-228ENST00000584074 OR10J6PQ8NGY7 276 aa15.23■□□□□ 0.03
PPP4R1-228ENST00000584074 PARD6GQ9BYG4 376 aaPredicted RBP15.23■□□□□ 0.03
PPP4R1-228ENST00000584074 TSPOP30536 169 aa15.22■□□□□ 0.03
PPP4R1-228ENST00000584074 CDKN1BP46527 198 aa15.22■□□□□ 0.03
PPP4R1-228ENST00000584074 CLINT1Q14677 625 aa15.22■□□□□ 0.03
PPP4R1-228ENST00000584074 KIR3DS1Q14943 382 aa15.22■□□□□ 0.03
PPP4R1-228ENST00000584074 SSNA1O43805 119 aa15.21■□□□□ 0.03
PPP4R1-228ENST00000584074 HTN1P15515 57 aa15.21■□□□□ 0.03
PPP4R1-228ENST00000584074 TMEM256Q8N2U0 113 aa15.21■□□□□ 0.03
PPP4R1-228ENST00000584074 PPP1R1CQ8WVI7 109 aa15.21■□□□□ 0.03
PPP4R1-228ENST00000584074 BATF3Q9NR55 127 aa15.21■□□□□ 0.03
PPP4R1-228ENST00000584074 TMEM14CQ9P0S9 112 aa15.21■□□□□ 0.03
PPP4R1-228ENST00000584074 TRBV19A0A075B6N1 114 aa15.2■□□□□ 0.02
PPP4R1-228ENST00000584074 PLAC8L1A1L4L8 177 aa15.2■□□□□ 0.02
PPP4R1-228ENST00000584074 P0DMU3 169 aa15.2■□□□□ 0.02
PPP4R1-228ENST00000584074 FAM231AP0DMU4 169 aa15.2■□□□□ 0.02
PPP4R1-228ENST00000584074 FAM231CP0DMU5 169 aa15.2■□□□□ 0.02
PPP4R1-228ENST00000584074 PYYP10082 97 aa15.2■□□□□ 0.02
PPP4R1-228ENST00000584074 TAS2R60P59551 318 aa15.2■□□□□ 0.02
PPP4R1-228ENST00000584074 FCN2Q15485 313 aa15.2■□□□□ 0.02
PPP4R1-228ENST00000584074 FAM210BQ96KR6 192 aa15.2■□□□□ 0.02
PPP4R1-228ENST00000584074 LYRM9A8MSI8 78 aa15.19■□□□□ 0.02
PPP4R1-228ENST00000584074 ZNF253O75346 499 aa15.19■□□□□ 0.02
PPP4R1-228ENST00000584074 M0R3E3 92 aa15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 NDUFB4O95168 129 aa15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 CT45A10P0DMU9 189 aa15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 DEFB130BP0DP73 79 aa15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 DEFB130AP0DP74 79 aa15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 HIST1H1EP10412 219 aaKnown RBP15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 GFI1BQ5VTD9 330 aa15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 POM121L12Q8N7R1 296 aa15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 SLC25A2Q9BXI2 301 aa15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 WDR61Q9GZS3 305 aaKnown RBP15.18■□□□□ 0.02
PPP4R1-228ENST00000584074 NPIPB6E9PJ23 425 aa15.17■□□□□ 0.02
PPP4R1-228ENST00000584074 MPC2O95563 127 aa15.17■□□□□ 0.02
PPP4R1-228ENST00000584074 TMEM88Q6PEY1 159 aa15.17■□□□□ 0.02
PPP4R1-228ENST00000584074 MIR17HGQ75NE6 70 aa15.17■□□□□ 0.02
PPP4R1-228ENST00000584074 BLNKQ8WV28 456 aa15.17■□□□□ 0.02
PPP4R1-228ENST00000584074 FAM167A-AS1Q96KT0 104 aa15.17■□□□□ 0.02
PPP4R1-228ENST00000584074 TIMM9Q9Y5J7 89 aa15.17■□□□□ 0.02
PPP4R1-228ENST00000584074 H7BYZ3 331 aa15.16■□□□□ 0.02
PPP4R1-228ENST00000584074 J3KRW8 73 aa15.16■□□□□ 0.02
PPP4R1-228ENST00000584074 MRPL53Q96EL3 112 aaKnown RBP15.16■□□□□ 0.02
PPP4R1-228ENST00000584074 C16orf74Q96GX8 76 aa15.16■□□□□ 0.02
PPP4R1-228ENST00000584074 EXOC3-AS1Q8N2X6 119 aa15.15■□□□□ 0.02
PPP4R1-228ENST00000584074 C20orf144Q9BQM9 153 aa15.15■□□□□ 0.02
PPP4R1-228ENST00000584074 ERCC8Q13216 396 aa15.14■□□□□ 0.01
PPP4R1-228ENST00000584074 PDE6HQ13956 83 aa15.14■□□□□ 0.01
PPP4R1-228ENST00000584074 RNASE8Q8TDE3 154 aaKnown RBP15.14■□□□□ 0.01
PPP4R1-228ENST00000584074 ODF3Q96PU9 254 aa15.14■□□□□ 0.01
PPP4R1-228ENST00000584074 ATP5SQ99766 215 aa15.14■□□□□ 0.01
PPP4R1-228ENST00000584074 KCNIP2Q9NS61 270 aa15.14■□□□□ 0.01
PPP4R1-228ENST00000584074 HSPB11Q9Y547 144 aa15.14■□□□□ 0.01
PPP4R1-228ENST00000584074 TIMM8BQ9Y5J9 83 aaPredicted RBP15.14■□□□□ 0.01
PPP4R1-228ENST00000584074 DNAH2Q9P225 4427 aa15.14■□□□□ 0.01
PPP4R1-228ENST00000584074 HECTD4Q9Y4D8 3996 aa15.13■□□□□ 0.01
PPP4R1-228ENST00000584074 TRAV12-3A0A0B4J271 114 aa15.13■□□□□ 0.01
PPP4R1-228ENST00000584074 PET100P0DJ07 73 aa15.13■□□□□ 0.01
PPP4R1-228ENST00000584074 LEPP41159 167 aa15.13■□□□□ 0.01
PPP4R1-228ENST00000584074 ZNF493Q6ZR52 646 aa15.13■□□□□ 0.01
PPP4R1-228ENST00000584074 TMEM263Q8WUH6 116 aaKnown RBP15.13■□□□□ 0.01
PPP4R1-228ENST00000584074 SMIM3Q9BZL3 60 aa15.13■□□□□ 0.01
PPP4R1-228ENST00000584074 NOP10Q9NPE3 64 aaKnown RBP15.13■□□□□ 0.01
PPP4R1-228ENST00000584074 PRELID1Q9Y255 219 aa15.13■□□□□ 0.01
PPP4R1-228ENST00000584074 RPL12P30050 165 aaKnown RBP15.12■□□□□ 0.01
PPP4R1-228ENST00000584074 ICAM4Q14773 271 aa15.12■□□□□ 0.01
PPP4R1-228ENST00000584074 OR51M1Q9H341 326 aa15.12■□□□□ 0.01
PPP4R1-228ENST00000584074 MBD2Q9UBB5 411 aa15.12■□□□□ 0.01
PPP4R1-228ENST00000584074 C17orf112F2Z3M2 114 aa15.11■□□□□ 0.01
PPP4R1-228ENST00000584074 NBEAP1P0C6P0 100 aa15.11■□□□□ 0.01
PPP4R1-228ENST00000584074 UBE2DNLQ8IWF7 75 aa15.11■□□□□ 0.01
PPP4R1-228ENST00000584074 FXYD5Q96DB9 178 aa15.11■□□□□ 0.01
PPP4R1-228ENST00000584074 MRPL32Q9BYC8 188 aaKnown RBP15.11■□□□□ 0.01
PPP4R1-228ENST00000584074 AGPAT4-IT1Q9H0P7 198 aa15.11■□□□□ 0.01
PPP4R1-228ENST00000584074 AAMDCQ9H7C9 122 aa15.11■□□□□ 0.01
PPP4R1-228ENST00000584074 FUT9Q9Y231 359 aa15.11■□□□□ 0.01
PPP4R1-228ENST00000584074 ALG5Q9Y673 324 aa15.11■□□□□ 0.01
PPP4R1-228ENST00000584074 CBY3A6NI87 242 aa15.1■□□□□ 0.01
PPP4R1-228ENST00000584074 F5H768 121 aa15.1■□□□□ 0.01
PPP4R1-228ENST00000584074 M0R2N4 97 aa15.1■□□□□ 0.01
PPP4R1-228ENST00000584074 OR10J4P0C629 311 aa15.1■□□□□ 0.01
PPP4R1-228ENST00000584074 FAM122CQ6P4D5 195 aa15.1■□□□□ 0.01
PPP4R1-228ENST00000584074 CCDC28AQ8IWP9 274 aa15.1■□□□□ 0.01
PPP4R1-228ENST00000584074 PAXXQ9BUH6 204 aa15.1■□□□□ 0.01
PPP4R1-228ENST00000584074 IGKV2-40A0A087WW87 121 aaPredicted RBP15.09■□□□□ 0.01
PPP4R1-228ENST00000584074 IFNA5P01569 189 aa15.09■□□□□ 0.01
PPP4R1-228ENST00000584074 IGKV2D-40P01614 121 aaPredicted RBP15.09■□□□□ 0.01
PPP4R1-228ENST00000584074 ATP5G1P05496 136 aa15.09■□□□□ 0.01
PPP4R1-228ENST00000584074 ATP5G3P48201 142 aa15.09■□□□□ 0.01
PPP4R1-228ENST00000584074 FFAR4Q5NUL3 377 aa15.09■□□□□ 0.01
PPP4R1-228ENST00000584074 SCGB1C1Q8TD33 95 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms