RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 MEOX2P50222 304 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 FXYD7P58549 80 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 C10orf113Q5VZT2 155 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 AKAP14Q86UN6 197 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 OR8I2Q8N0Y5 310 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 KCNRGQ8N5I3 272 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 OR11H4Q8NGC9 324 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 TMEM37Q8WXS4 190 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 CLUHP3Q96NS8 147 aa9.62□□□□□ -0.87
SS18-222ENST00000582792 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
SS18-222ENST00000582792 BORCS7-ASMTA0A0B4J1R7 106 aa9.61□□□□□ -0.87
SS18-222ENST00000582792 CDK2AP2O75956 126 aa9.61□□□□□ -0.87
SS18-222ENST00000582792 C1QBP02746 253 aa9.61□□□□□ -0.87
SS18-222ENST00000582792 HTN3P15516 51 aa9.61□□□□□ -0.87
SS18-222ENST00000582792 RPL7P18124 248 aaKnown RBP9.61□□□□□ -0.87
SS18-222ENST00000582792 DEFB1P60022 68 aa9.61□□□□□ -0.87
SS18-222ENST00000582792 LINC00305Q7Z4B0 112 aa9.61□□□□□ -0.87
SS18-222ENST00000582792 OR2G3Q8NGZ4 309 aa9.61□□□□□ -0.87
SS18-222ENST00000582792 PSMG3Q9BT73 122 aaPredicted RBP9.61□□□□□ -0.87
SS18-222ENST00000582792 SAV1Q9H4B6 383 aaPredicted RBP9.61□□□□□ -0.87
SS18-222ENST00000582792 DOK5Q9P104 306 aa9.61□□□□□ -0.87
SS18-222ENST00000582792 hCG_2014768A0A024R1R8 64 aa9.6□□□□□ -0.87
SS18-222ENST00000582792 A0A087X0K7 114 aa9.6□□□□□ -0.87
SS18-222ENST00000582792 FAM3BP58499 235 aaPredicted RBP9.6□□□□□ -0.87
SS18-222ENST00000582792 SERF2P84101 59 aa9.6□□□□□ -0.87
SS18-222ENST00000582792 TMEM88Q6PEY1 159 aa9.6□□□□□ -0.87
SS18-222ENST00000582792 FOXI2Q6ZQN5 318 aa9.6□□□□□ -0.87
SS18-222ENST00000582792 GNPNAT1Q96EK6 184 aaPredicted RBP9.6□□□□□ -0.87
SS18-222ENST00000582792 MRPL32Q9BYC8 188 aaKnown RBP9.6□□□□□ -0.87
SS18-222ENST00000582792 SLC25A32Q9H2D1 315 aa9.6□□□□□ -0.87
SS18-222ENST00000582792 LOC102723971A0A1B0GUV8 181 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 C16orf90A8MZG2 172 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 MRPS12O15235 138 aaKnown RBP9.59□□□□□ -0.87
SS18-222ENST00000582792 HBE1P02100 147 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 CXCL2P19875 107 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 ID1P41134 155 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 PSMB3P49720 205 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 TNP2Q05952 138 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 BPIFA4PQ86YQ2 179 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 HYLS1Q96M11 299 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 LINC00052Q96N35 136 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 UHRF2Q96PU4 802 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 ARPC5LQ9BPX5 153 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 RSG1Q9BU20 258 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 SLC35B3Q9H1N7 401 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 SLC25A22Q9H936 323 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 CYTL1Q9NRR1 136 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 GOLT1BQ9Y3E0 138 aa9.59□□□□□ -0.87
SS18-222ENST00000582792 YTHDF2Q9Y5A9 579 aaKnown RBP9.59□□□□□ -0.87
SS18-222ENST00000582792 A0A1B0GVG6 124 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 SOCS3O14543 225 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 MBP02144 154 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 M6PRP20645 277 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 ATP6V0CP27449 155 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 ACOT6Q3I5F7 207 aaPredicted RBP9.58□□□□□ -0.88
SS18-222ENST00000582792 FFAR4Q5NUL3 377 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 SPATA31B1PQ5VZV4 182 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 RPL7L1Q6DKI1 246 aaKnown RBP9.58□□□□□ -0.88
SS18-222ENST00000582792 C1orf158Q8N1D5 194 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 MAPKAPK5-AS1Q8N8E1 139 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 C15orf53Q8NAA6 179 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 OR4B1Q8NGF8 309 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 TMEM14CQ9P0S9 112 aa9.58□□□□□ -0.88
SS18-222ENST00000582792 ISLRO14498 428 aa9.57□□□□□ -0.88
SS18-222ENST00000582792 BCL2L11O43521 198 aa9.57□□□□□ -0.88
SS18-222ENST00000582792 DAD1P61803 113 aa9.57□□□□□ -0.88
SS18-222ENST00000582792 EIF5AP63241 154 aaKnown RBP9.57□□□□□ -0.88
SS18-222ENST00000582792 PSG9Q00887 426 aa9.57□□□□□ -0.88
SS18-222ENST00000582792 RRN3P1Q2M238 152 aa9.57□□□□□ -0.88
SS18-222ENST00000582792 FAM78BQ5VT40 261 aa9.57□□□□□ -0.88
SS18-222ENST00000582792 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.57□□□□□ -0.88
SS18-222ENST00000582792 C17orf77Q96MU5 243 aa9.57□□□□□ -0.88
SS18-222ENST00000582792 FUT9Q9Y231 359 aa9.57□□□□□ -0.88
SS18-222ENST00000582792 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
SS18-222ENST00000582792 KANTRA0A1W2PQU2 76 aa9.56□□□□□ -0.88
SS18-222ENST00000582792 RHOBP62745 196 aa9.56□□□□□ -0.88
SS18-222ENST00000582792 GUK1Q16774 197 aa9.56□□□□□ -0.88
SS18-222ENST00000582792 GCSAMLQ5JQS6 135 aa9.56□□□□□ -0.88
SS18-222ENST00000582792 MORN5Q5VZ52 161 aa9.56□□□□□ -0.88
SS18-222ENST00000582792 TMUB2Q71RG4 321 aa9.56□□□□□ -0.88
SS18-222ENST00000582792 HSD17B11Q8NBQ5 300 aa9.56□□□□□ -0.88
SS18-222ENST00000582792 A0A0J9YX75 114 aa9.55□□□□□ -0.88
SS18-222ENST00000582792 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
SS18-222ENST00000582792 F6UB75 175 aa9.55□□□□□ -0.88
SS18-222ENST00000582792 ZNF253O75346 499 aa9.55□□□□□ -0.88
SS18-222ENST00000582792 TAS2R45P59539 299 aa9.55□□□□□ -0.88
SS18-222ENST00000582792 EBLN2Q6P2I7 272 aa9.55□□□□□ -0.88
SS18-222ENST00000582792 LCN15Q6UWW0 184 aa9.55□□□□□ -0.88
SS18-222ENST00000582792 FAM167A-AS1Q96KT0 104 aa9.55□□□□□ -0.88
SS18-222ENST00000582792 ATG101Q9BSB4 218 aa9.55□□□□□ -0.88
SS18-222ENST00000582792 TRAV5A0A0B4J249 113 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 IGLC2P0DOY2 106 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 HIST1H1EP10412 219 aaKnown RBP9.54□□□□□ -0.88
SS18-222ENST00000582792 PDE6HQ13956 83 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 LGALSLQ3ZCW2 172 aaPredicted RBP9.54□□□□□ -0.88
SS18-222ENST00000582792 MIR17HGQ75NE6 70 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 C6orf223Q8N319 242 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 OR10G4Q8NGN3 311 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 OR10G9Q8NGN4 311 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 OR10G7Q8NGN6 311 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms