RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 OR7C2O60412 319 aa11.94□□□□□ -0.5
RNF43-206ENST00000582293 FXYD7P58549 80 aa11.94□□□□□ -0.5
RNF43-206ENST00000582293 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
RNF43-206ENST00000582293 TMUB2Q71RG4 321 aa11.94□□□□□ -0.5
RNF43-206ENST00000582293 EXOC3-AS1Q8N2X6 119 aa11.94□□□□□ -0.5
RNF43-206ENST00000582293 DNAH7Q8WXX0 4024 aa11.94□□□□□ -0.5
RNF43-206ENST00000582293 STAG3L2P0CL84 134 aa11.93□□□□□ -0.5
RNF43-206ENST00000582293 STAG3L3P0CL85 134 aa11.93□□□□□ -0.5
RNF43-206ENST00000582293 CDC34P49427 236 aaPredicted RBP11.93□□□□□ -0.5
RNF43-206ENST00000582293 UBE2L3P68036 154 aaKnown RBP11.93□□□□□ -0.5
RNF43-206ENST00000582293 TMEM41BQ5BJD5 291 aa11.93□□□□□ -0.5
RNF43-206ENST00000582293 RAB24Q969Q5 203 aa11.93□□□□□ -0.5
RNF43-206ENST00000582293 XCL2Q9UBD3 114 aa11.93□□□□□ -0.5
RNF43-206ENST00000582293 A0A1W2PPV4 95 aa11.92□□□□□ -0.5
RNF43-206ENST00000582293 MBP02144 154 aa11.92□□□□□ -0.5
RNF43-206ENST00000582293 TAS2R45P59539 299 aa11.92□□□□□ -0.5
RNF43-206ENST00000582293 PSG9Q00887 426 aa11.92□□□□□ -0.5
RNF43-206ENST00000582293 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
RNF43-206ENST00000582293 WWC2-AS2Q96NR7 200 aa11.92□□□□□ -0.5
RNF43-206ENST00000582293 CRXO43186 299 aaPredicted RBP11.91□□□□□ -0.5
RNF43-206ENST00000582293 DUSP14O95147 198 aaKnown RBP11.91□□□□□ -0.5
RNF43-206ENST00000582293 ARL14EPLP0DKL9 152 aa11.91□□□□□ -0.5
RNF43-206ENST00000582293 HIST1H1AQ02539 215 aaPredicted RBP11.91□□□□□ -0.5
RNF43-206ENST00000582293 ICAM4Q14773 271 aa11.91□□□□□ -0.5
RNF43-206ENST00000582293 PQLC2Q6ZP29 291 aa11.91□□□□□ -0.5
RNF43-206ENST00000582293 SUN5Q8TC36 379 aa11.91□□□□□ -0.5
RNF43-206ENST00000582293 ZNF471Q9BX82 626 aaPredicted RBP11.91□□□□□ -0.5
RNF43-206ENST00000582293 X6R8D5 127 aa11.91□□□□□ -0.5
RNF43-206ENST00000582293 KANTRA0A1W2PQU2 76 aa11.9□□□□□ -0.5
RNF43-206ENST00000582293 ZNF705EA8MWA4 302 aaPredicted RBP11.9□□□□□ -0.5
RNF43-206ENST00000582293 OR11H2Q8NH07 326 aa11.9□□□□□ -0.5
RNF43-206ENST00000582293 RARRES2Q99969 163 aa11.9□□□□□ -0.5
RNF43-206ENST00000582293 NPIPB6E9PJ23 425 aa11.89□□□□□ -0.51
RNF43-206ENST00000582293 M0R2Z0 102 aa11.89□□□□□ -0.51
RNF43-206ENST00000582293 NUTF2P61970 127 aaKnown RBP11.89□□□□□ -0.51
RNF43-206ENST00000582293 RANP62826 216 aaKnown RBP11.89□□□□□ -0.51
RNF43-206ENST00000582293 SPINK13Q1W4C9 94 aa11.89□□□□□ -0.51
RNF43-206ENST00000582293 C1orf158Q8N1D5 194 aa11.89□□□□□ -0.51
RNF43-206ENST00000582293 C9orf62Q8N4C0 152 aa11.89□□□□□ -0.51
RNF43-206ENST00000582293 HYLS1Q96M11 299 aa11.89□□□□□ -0.51
RNF43-206ENST00000582293 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
RNF43-206ENST00000582293 Q9H3A6 140 aa11.89□□□□□ -0.51
RNF43-206ENST00000582293 PRELID1Q9Y255 219 aa11.89□□□□□ -0.51
RNF43-206ENST00000582293 A0A0J9YWU9 116 aa11.88□□□□□ -0.51
RNF43-206ENST00000582293 SEC11BP0C7V7 166 aa11.88□□□□□ -0.51
RNF43-206ENST00000582293 GCHFRP30047 84 aa11.88□□□□□ -0.51
RNF43-206ENST00000582293 ERCC8Q13216 396 aa11.88□□□□□ -0.51
RNF43-206ENST00000582293 KIR3DS1Q14943 382 aa11.88□□□□□ -0.51
RNF43-206ENST00000582293 ZNF705AQ6ZN79 300 aaPredicted RBP11.88□□□□□ -0.51
RNF43-206ENST00000582293 LYPD1Q8N2G4 141 aa11.88□□□□□ -0.51
RNF43-206ENST00000582293 Q8NAQ8 132 aa11.88□□□□□ -0.51
RNF43-206ENST00000582293 STOML3Q8TAV4 291 aa11.88□□□□□ -0.51
RNF43-206ENST00000582293 C1QTNF4Q9BXJ3 329 aa11.88□□□□□ -0.51
RNF43-206ENST00000582293 CTXND1A0A1B0GTU2 59 aa11.87□□□□□ -0.51
RNF43-206ENST00000582293 BOLA2-SMG1P6H3BVE0 249 aa11.87□□□□□ -0.51
RNF43-206ENST00000582293 PFDN1O60925 122 aa11.87□□□□□ -0.51
RNF43-206ENST00000582293 RBMY1A1P0DJD3 496 aaKnown RBP11.87□□□□□ -0.51
RNF43-206ENST00000582293 RBMY1CP0DJD4 496 aa11.87□□□□□ -0.51
RNF43-206ENST00000582293 CT45A10P0DMU9 189 aa11.87□□□□□ -0.51
RNF43-206ENST00000582293 FHITP49789 147 aa11.87□□□□□ -0.51
RNF43-206ENST00000582293 RBMY1FQ15415 496 aaKnown RBP11.87□□□□□ -0.51
RNF43-206ENST00000582293 AKR1C8PQ5T2L2 129 aa11.87□□□□□ -0.51
RNF43-206ENST00000582293 BAP18Q8IXM2 172 aa11.87□□□□□ -0.51
RNF43-206ENST00000582293 AAMDCQ9H7C9 122 aa11.87□□□□□ -0.51
RNF43-206ENST00000582293 TRAV12-2A0A075B6T6 113 aa11.86□□□□□ -0.51
RNF43-206ENST00000582293 IGKV2-40A0A087WW87 121 aaPredicted RBP11.86□□□□□ -0.51
RNF43-206ENST00000582293 IGKV2D-40P01614 121 aaPredicted RBP11.86□□□□□ -0.51
RNF43-206ENST00000582293 OR10J6PQ8NGY7 276 aa11.86□□□□□ -0.51
RNF43-206ENST00000582293 FAM19A4Q96LR4 140 aa11.86□□□□□ -0.51
RNF43-206ENST00000582293 VGLL1Q99990 258 aa11.86□□□□□ -0.51
RNF43-206ENST00000582293 AGPAT4-IT1Q9H0P7 198 aa11.86□□□□□ -0.51
RNF43-206ENST00000582293 TMPRSS5Q9H3S3 457 aa11.86□□□□□ -0.51
RNF43-206ENST00000582293 STARD9Q9P2P6 4700 aa11.85□□□□□ -0.51
RNF43-206ENST00000582293 IGHV4-28A0A0C4DH34 117 aa11.85□□□□□ -0.51
RNF43-206ENST00000582293 DEFB4AO15263 64 aa11.85□□□□□ -0.51
RNF43-206ENST00000582293 CXorf1O96002 111 aa11.85□□□□□ -0.51
RNF43-206ENST00000582293 FGF8P55075 233 aaPredicted RBP11.85□□□□□ -0.51
RNF43-206ENST00000582293 TMED6Q8WW62 240 aa11.85□□□□□ -0.51
RNF43-206ENST00000582293 IGF2BP2-AS1Q96M15 143 aa11.85□□□□□ -0.51
RNF43-206ENST00000582293 OTORQ9NRC9 128 aa11.85□□□□□ -0.51
RNF43-206ENST00000582293 PGPA6NDG6 321 aa11.84□□□□□ -0.51
RNF43-206ENST00000582293 TPT1P13693 172 aaKnown RBP11.84□□□□□ -0.51
RNF43-206ENST00000582293 NKX2-5P52952 324 aaPredicted RBP11.84□□□□□ -0.51
RNF43-206ENST00000582293 ZFP69Q49AA0 526 aa11.84□□□□□ -0.51
RNF43-206ENST00000582293 C9orf47Q6ZRZ4 202 aa11.84□□□□□ -0.51
RNF43-206ENST00000582293 ODF3Q96PU9 254 aa11.84□□□□□ -0.51
RNF43-206ENST00000582293 C11orf68Q9H3H3 251 aaKnown RBP11.84□□□□□ -0.51
RNF43-206ENST00000582293 CSMD3Q7Z407 3707 aa11.84□□□□□ -0.51
RNF43-206ENST00000582293 GGTLC3B5MD39 225 aa11.83□□□□□ -0.52
RNF43-206ENST00000582293 DIRC3C9JPN6 131 aa11.83□□□□□ -0.52
RNF43-206ENST00000582293 AMBPP02760 352 aa11.83□□□□□ -0.52
RNF43-206ENST00000582293 PRM2P04554 102 aa11.83□□□□□ -0.52
RNF43-206ENST00000582293 CDKN1BP46527 198 aa11.83□□□□□ -0.52
RNF43-206ENST00000582293 MUC7Q8TAX7 377 aa11.83□□□□□ -0.52
RNF43-206ENST00000582293 NEU1Q99519 415 aa11.83□□□□□ -0.52
RNF43-206ENST00000582293 IGHV3OR16-12A0A075B7B8 117 aa11.82□□□□□ -0.52
RNF43-206ENST00000582293 MAP1LC3B2A6NCE7 125 aa11.82□□□□□ -0.52
RNF43-206ENST00000582293 MIFP14174 115 aa11.82□□□□□ -0.52
RNF43-206ENST00000582293 GNG5P63218 68 aa11.82□□□□□ -0.52
RNF43-206ENST00000582293 EIF5AP63241 154 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms