RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 ZNF345Q14585 488 aa13.16□□□□□ -0.3
TOP2A-205ENST00000581055 FXYD5Q96DB9 178 aa13.16□□□□□ -0.3
TOP2A-205ENST00000581055 GOLT1BQ9Y3E0 138 aa13.16□□□□□ -0.3
TOP2A-205ENST00000581055 BOLA2-SMG1P6H3BVE0 249 aa13.15□□□□□ -0.3
TOP2A-205ENST00000581055 FAM122CQ6P4D5 195 aa13.15□□□□□ -0.3
TOP2A-205ENST00000581055 PQLC2Q6ZP29 291 aa13.15□□□□□ -0.3
TOP2A-205ENST00000581055 SMIM9A6NGZ8 99 aa13.14□□□□□ -0.31
TOP2A-205ENST00000581055 CASC10Q5T4H9 136 aa13.14□□□□□ -0.31
TOP2A-205ENST00000581055 ZNF705AQ6ZN79 300 aaPredicted RBP13.14□□□□□ -0.31
TOP2A-205ENST00000581055 LYPD1Q8N2G4 141 aa13.14□□□□□ -0.31
TOP2A-205ENST00000581055 KCNRGQ8N5I3 272 aa13.14□□□□□ -0.31
TOP2A-205ENST00000581055 IGF2BP2-AS1Q96M15 143 aa13.14□□□□□ -0.31
TOP2A-205ENST00000581055 SH3BGRL3Q9H299 93 aa13.14□□□□□ -0.31
TOP2A-205ENST00000581055 X6R8D5 127 aa13.14□□□□□ -0.31
TOP2A-205ENST00000581055 IGHV4-28A0A0C4DH34 117 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 A0A0D9SG52 128 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 PRAC2D3DTV9 90 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 INSP01308 110 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 TSPOP30536 169 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 CDC34P49427 236 aaPredicted RBP13.13□□□□□ -0.31
TOP2A-205ENST00000581055 ICAM4Q14773 271 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 SPINK13Q1W4C9 94 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 ZFAND6Q6FIF0 208 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 Q8NAQ8 132 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 ZNF503Q96F45 646 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 NEU1Q99519 415 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 ARPC5LQ9BPX5 153 aa13.13□□□□□ -0.31
TOP2A-205ENST00000581055 IGHV3OR16-12A0A075B7B8 117 aa13.12□□□□□ -0.31
TOP2A-205ENST00000581055 M0R2Z0 102 aa13.12□□□□□ -0.31
TOP2A-205ENST00000581055 M0R3E3 92 aa13.12□□□□□ -0.31
TOP2A-205ENST00000581055 RPP25LQ8N5L8 163 aaKnown RBP13.12□□□□□ -0.31
TOP2A-205ENST00000581055 OR11H4Q8NGC9 324 aa13.12□□□□□ -0.31
TOP2A-205ENST00000581055 TMEM208Q9BTX3 173 aa13.12□□□□□ -0.31
TOP2A-205ENST00000581055 ACTR3CQ9C0K3 210 aaPredicted RBP13.12□□□□□ -0.31
TOP2A-205ENST00000581055 NPIPB6E9PJ23 425 aa13.11□□□□□ -0.31
TOP2A-205ENST00000581055 DEFB4AO15263 64 aa13.11□□□□□ -0.31
TOP2A-205ENST00000581055 CDKN1BP46527 198 aa13.11□□□□□ -0.31
TOP2A-205ENST00000581055 CSN1S1P47710 185 aa13.11□□□□□ -0.31
TOP2A-205ENST00000581055 RANP62826 216 aaKnown RBP13.11□□□□□ -0.31
TOP2A-205ENST00000581055 C11orf45Q8TAV5 145 aa13.11□□□□□ -0.31
TOP2A-205ENST00000581055 RAB24Q969Q5 203 aa13.11□□□□□ -0.31
TOP2A-205ENST00000581055 PHYHIPLQ96FC7 376 aa13.11□□□□□ -0.31
TOP2A-205ENST00000581055 CYTL1Q9NRR1 136 aa13.11□□□□□ -0.31
TOP2A-205ENST00000581055 AGRNO00468 2067 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 KANTRA0A1W2PQU2 76 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 CXorf65A6NEN9 183 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 RBMY1A1P0DJD3 496 aaKnown RBP13.1□□□□□ -0.31
TOP2A-205ENST00000581055 RBMY1CP0DJD4 496 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 PRB4P10163 310 aaPredicted RBP13.1□□□□□ -0.31
TOP2A-205ENST00000581055 RBMY1FQ15415 496 aaKnown RBP13.1□□□□□ -0.31
TOP2A-205ENST00000581055 FAM74A1Q5RGS3 127 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 AKR1C8PQ5T2L2 129 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 TCTE3Q8IZS6 198 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 C1orf158Q8N1D5 194 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 ST6GAL2Q96JF0 529 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 LINC00477Q96M19 166 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 ODF3Q96PU9 254 aa13.1□□□□□ -0.31
TOP2A-205ENST00000581055 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
TOP2A-205ENST00000581055 HMGB3O15347 200 aaKnown RBP13.09□□□□□ -0.31
TOP2A-205ENST00000581055 CRXO43186 299 aaPredicted RBP13.09□□□□□ -0.31
TOP2A-205ENST00000581055 EIF3GO75821 320 aaKnown RBP eCLIP13.09□□□□□ -0.312e-6■□□□□ 8.2
TOP2A-205ENST00000581055 HBE1P02100 147 aa13.09□□□□□ -0.31
TOP2A-205ENST00000581055 STAG3L2P0CL84 134 aa13.09□□□□□ -0.31
TOP2A-205ENST00000581055 STAG3L3P0CL85 134 aa13.09□□□□□ -0.31
TOP2A-205ENST00000581055 LEPP41159 167 aa13.09□□□□□ -0.31
TOP2A-205ENST00000581055 BAP18Q8IXM2 172 aa13.09□□□□□ -0.31
TOP2A-205ENST00000581055 RXFP4Q8TDU9 374 aa13.09□□□□□ -0.31
TOP2A-205ENST00000581055 Q9H3A6 140 aa13.09□□□□□ -0.31
TOP2A-205ENST00000581055 TRAV12-2A0A075B6T6 113 aa13.08□□□□□ -0.32
TOP2A-205ENST00000581055 BCL2L11O43521 198 aa13.08□□□□□ -0.32
TOP2A-205ENST00000581055 PFDN1O60925 122 aa13.08□□□□□ -0.32
TOP2A-205ENST00000581055 CXorf1O96002 111 aa13.08□□□□□ -0.32
TOP2A-205ENST00000581055 ARL14EPLP0DKL9 152 aa13.08□□□□□ -0.32
TOP2A-205ENST00000581055 EIF5AP63241 154 aaKnown RBP13.08□□□□□ -0.32
TOP2A-205ENST00000581055 TMEM256Q8N2U0 113 aa13.08□□□□□ -0.32
TOP2A-205ENST00000581055 OTORQ9NRC9 128 aa13.08□□□□□ -0.32
TOP2A-205ENST00000581055 CT45A10P0DMU9 189 aa13.07□□□□□ -0.32
TOP2A-205ENST00000581055 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
TOP2A-205ENST00000581055 RRN3P1Q2M238 152 aa13.07□□□□□ -0.32
TOP2A-205ENST00000581055 TMEM78Q5T7P6 136 aa13.07□□□□□ -0.32
TOP2A-205ENST00000581055 CMTM2Q8TAZ6 248 aa13.07□□□□□ -0.32
TOP2A-205ENST00000581055 C20orf144Q9BQM9 153 aa13.07□□□□□ -0.32
TOP2A-205ENST00000581055 hCG_2014768A0A024R1R8 64 aa13.06□□□□□ -0.32
TOP2A-205ENST00000581055 GCHFRP30047 84 aa13.06□□□□□ -0.32
TOP2A-205ENST00000581055 ERCC8Q13216 396 aa13.06□□□□□ -0.32
TOP2A-205ENST00000581055 C9orf47Q6ZRZ4 202 aa13.06□□□□□ -0.32
TOP2A-205ENST00000581055 AKAP14Q86UN6 197 aa13.06□□□□□ -0.32
TOP2A-205ENST00000581055 LINC01587Q99440 93 aa13.06□□□□□ -0.32
TOP2A-205ENST00000581055 ZNF471Q9BX82 626 aaPredicted RBP13.06□□□□□ -0.32
TOP2A-205ENST00000581055 AGPAT4-IT1Q9H0P7 198 aa13.06□□□□□ -0.32
TOP2A-205ENST00000581055 TMEM167BQ9NRX6 74 aa13.06□□□□□ -0.32
TOP2A-205ENST00000581055 IGKV2-40A0A087WW87 121 aaPredicted RBP13.05□□□□□ -0.32
TOP2A-205ENST00000581055 CTXND1A0A1B0GTU2 59 aa13.05□□□□□ -0.32
TOP2A-205ENST00000581055 RBAKDNA6NC62 111 aa13.05□□□□□ -0.32
TOP2A-205ENST00000581055 PGPA6NDG6 321 aa13.05□□□□□ -0.32
TOP2A-205ENST00000581055 NUPR2A6NF83 97 aa13.05□□□□□ -0.32
TOP2A-205ENST00000581055 IGKV2D-40P01614 121 aaPredicted RBP13.05□□□□□ -0.32
TOP2A-205ENST00000581055 NANOS2P60321 138 aaKnown RBP13.05□□□□□ -0.32
TOP2A-205ENST00000581055 TMUB2Q71RG4 321 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms