RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 FUT9Q9Y231 359 aa14.46□□□□□ -0.09
SS18-218ENST00000581021 TRAV12-2A0A075B6T6 113 aa14.45□□□□□ -0.1
SS18-218ENST00000581021 PRM2P04554 102 aa14.45□□□□□ -0.1
SS18-218ENST00000581021 OR2T35Q8NGX2 323 aa14.45□□□□□ -0.1
SS18-218ENST00000581021 BLNKQ8WV28 456 aa14.45□□□□□ -0.1
SS18-218ENST00000581021 NUPR2A6NF83 97 aa14.44□□□□□ -0.1
SS18-218ENST00000581021 OR10J4P0C629 311 aa14.44□□□□□ -0.1
SS18-218ENST00000581021 KIR3DS1Q14943 382 aa14.44□□□□□ -0.1
SS18-218ENST00000581021 EXOC3-AS1Q8N2X6 119 aa14.44□□□□□ -0.1
SS18-218ENST00000581021 GOLT1BQ9Y3E0 138 aa14.44□□□□□ -0.1
SS18-218ENST00000581021 HYDINQ4G0P3 5121 aa14.43□□□□□ -0.1
SS18-218ENST00000581021 RHOBP62745 196 aa14.43□□□□□ -0.1
SS18-218ENST00000581021 ZNF767PQ75MW2 155 aa14.43□□□□□ -0.1
SS18-218ENST00000581021 OR51M1Q9H341 326 aa14.43□□□□□ -0.1
SS18-218ENST00000581021 TNFSF18Q9UNG2 199 aa14.43□□□□□ -0.1
SS18-218ENST00000581021 FXYD6-FXYD2A0A087WZ82 144 aa14.42□□□□□ -0.1
SS18-218ENST00000581021 INSP01308 110 aa14.42□□□□□ -0.1
SS18-218ENST00000581021 RAB2AP61019 212 aa14.42□□□□□ -0.1
SS18-218ENST00000581021 PDE6HQ13956 83 aa14.42□□□□□ -0.1
SS18-218ENST00000581021 PHYHIPLQ96FC7 376 aa14.42□□□□□ -0.1
SS18-218ENST00000581021 PAXXQ9BUH6 204 aa14.42□□□□□ -0.1
SS18-218ENST00000581021 SMIM9A6NGZ8 99 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 NPIPB6E9PJ23 425 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 SMLR1H3BR10 107 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 AMBPP02760 352 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 CT45A10P0DMU9 189 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 EMP1P54849 157 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 C12orf74Q32Q52 190 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 Q6ZTC4 211 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 HSD17B11Q8NBQ5 300 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 TIMM9Q9Y5J7 89 aa14.41□□□□□ -0.1
SS18-218ENST00000581021 OR7C2O60412 319 aa14.4□□□□□ -0.1
SS18-218ENST00000581021 NBEAP1P0C6P0 100 aa14.4□□□□□ -0.1
SS18-218ENST00000581021 RPP25LQ8N5L8 163 aaKnown RBP14.4□□□□□ -0.1
SS18-218ENST00000581021 OR10J6PQ8NGY7 276 aa14.4□□□□□ -0.1
SS18-218ENST00000581021 RNF141Q8WVD5 230 aa14.4□□□□□ -0.1
SS18-218ENST00000581021 MRPL53Q96EL3 112 aaKnown RBP14.4□□□□□ -0.1
SS18-218ENST00000581021 SH3BGRL3Q9H299 93 aa14.4□□□□□ -0.1
SS18-218ENST00000581021 LOC102723971A0A1B0GUV8 181 aa14.39□□□□□ -0.11
SS18-218ENST00000581021 ZNF705GA8MUZ8 300 aaPredicted RBP14.39□□□□□ -0.11
SS18-218ENST00000581021 ATP6V0CP27449 155 aa14.39□□□□□ -0.11
SS18-218ENST00000581021 ERCC8Q13216 396 aa14.39□□□□□ -0.11
SS18-218ENST00000581021 ICAM4Q14773 271 aa14.39□□□□□ -0.11
SS18-218ENST00000581021 HBE1P02100 147 aa14.38□□□□□ -0.11
SS18-218ENST00000581021 M6PRP20645 277 aa14.38□□□□□ -0.11
SS18-218ENST00000581021 CDKN1BP46527 198 aa14.38□□□□□ -0.11
SS18-218ENST00000581021 UBE2L3P68036 154 aaKnown RBP14.38□□□□□ -0.11
SS18-218ENST00000581021 ZNF266Q14584 549 aa14.38□□□□□ -0.11
SS18-218ENST00000581021 GFI1BQ5VTD9 330 aa14.38□□□□□ -0.11
SS18-218ENST00000581021 RPL7L1Q6DKI1 246 aaKnown RBP14.38□□□□□ -0.11
SS18-218ENST00000581021 OR2G3Q8NGZ4 309 aa14.38□□□□□ -0.11
SS18-218ENST00000581021 TMEM208Q9BTX3 173 aa14.38□□□□□ -0.11
SS18-218ENST00000581021 PPP1R14DQ9NXH3 145 aa14.38□□□□□ -0.11
SS18-218ENST00000581021 IGKV2-40A0A087WW87 121 aaPredicted RBP14.37□□□□□ -0.11
SS18-218ENST00000581021 IGKV2D-40P01614 121 aaPredicted RBP14.37□□□□□ -0.11
SS18-218ENST00000581021 AZU1P20160 251 aa14.37□□□□□ -0.11
SS18-218ENST00000581021 RRN3P1Q2M238 152 aa14.37□□□□□ -0.11
SS18-218ENST00000581021 ACOT6Q3I5F7 207 aaPredicted RBP14.37□□□□□ -0.11
SS18-218ENST00000581021 KHDC3LQ587J8 217 aa14.37□□□□□ -0.11
SS18-218ENST00000581021 FAM122CQ6P4D5 195 aa14.37□□□□□ -0.11
SS18-218ENST00000581021 INO80EQ8NBZ0 244 aaPredicted RBP14.37□□□□□ -0.11
SS18-218ENST00000581021 PLA2G2EQ9NZK7 142 aa14.37□□□□□ -0.11
SS18-218ENST00000581021 DKK2Q9UBU2 259 aa14.37□□□□□ -0.11
SS18-218ENST00000581021 YTHDF2Q9Y5A9 579 aaKnown RBP14.37□□□□□ -0.11
SS18-218ENST00000581021 PLAC8L1A1L4L8 177 aa14.36□□□□□ -0.11
SS18-218ENST00000581021 HMGB3O15347 200 aaKnown RBP14.36□□□□□ -0.11
SS18-218ENST00000581021 JTBO76095 146 aa14.36□□□□□ -0.11
SS18-218ENST00000581021 FAM222AQ5U5X8 452 aa14.36□□□□□ -0.11
SS18-218ENST00000581021 LINC00476Q8WZB0 136 aa14.36□□□□□ -0.11
SS18-218ENST00000581021 PSMG3Q9BT73 122 aaPredicted RBP14.36□□□□□ -0.11
SS18-218ENST00000581021 AGPAT4-IT1Q9H0P7 198 aa14.36□□□□□ -0.11
SS18-218ENST00000581021 PRELID1Q9Y255 219 aa14.36□□□□□ -0.11
SS18-218ENST00000581021 KLK5Q9Y337 293 aaPredicted RBP14.36□□□□□ -0.11
SS18-218ENST00000581021 TMEM189A5PLL7 270 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 ARPC5O15511 151 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 OR10G4Q8NGN3 311 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 OR10G9Q8NGN4 311 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 OR10G7Q8NGN6 311 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 FAM19A4Q96LR4 140 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 ODF3Q96PU9 254 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 VGLL1Q99990 258 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 AAMDCQ9H7C9 122 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 VPS13DQ5THJ4 4388 aa14.35□□□□□ -0.11
SS18-218ENST00000581021 J3KRW8 73 aa14.34□□□□□ -0.11
SS18-218ENST00000581021 RANP62826 216 aaKnown RBP14.34□□□□□ -0.11
SS18-218ENST00000581021 Q9H3A6 140 aa14.34□□□□□ -0.11
SS18-218ENST00000581021 SPART-AS1P0CW21 52 aa14.33□□□□□ -0.12
SS18-218ENST00000581021 TAS2R45P59539 299 aa14.33□□□□□ -0.12
SS18-218ENST00000581021 C9orf47Q6ZRZ4 202 aa14.33□□□□□ -0.12
SS18-218ENST00000581021 SSX7Q7RTT5 188 aa14.33□□□□□ -0.12
SS18-218ENST00000581021 OR11H4Q8NGC9 324 aa14.33□□□□□ -0.12
SS18-218ENST00000581021 C2CD4CQ8TF44 421 aa14.33□□□□□ -0.12
SS18-218ENST00000581021 LINC01587Q99440 93 aa14.33□□□□□ -0.12
SS18-218ENST00000581021 CYTL1Q9NRR1 136 aa14.33□□□□□ -0.12
SS18-218ENST00000581021 TRAV10A0A0B4J240 114 aa14.32□□□□□ -0.12
SS18-218ENST00000581021 C11orf94C9JXX5 98 aa14.32□□□□□ -0.12
SS18-218ENST00000581021 TSPOP30536 169 aa14.32□□□□□ -0.12
SS18-218ENST00000581021 LEPP41159 167 aa14.32□□□□□ -0.12
SS18-218ENST00000581021 TAS2R60P59551 318 aa14.32□□□□□ -0.12
SS18-218ENST00000581021 PRR9Q5T870 116 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms