RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 ARV1Q9H2C2 271 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 MS4A6AQ9H2W1 248 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 ZMAT4Q9H898 229 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 DNAJC4Q9NNZ3 241 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 TIMM9Q9Y5J7 89 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 PXMP4Q9Y6I8 212 aa7.38□□□□□ -1.23
GGA3-209ENST00000580646 STAB2Q8WWQ8 2551 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 IGHV3-66A0A0C4DH42 116 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 ZNF705EA8MWA4 302 aaPredicted RBP7.37□□□□□ -1.23
GGA3-209ENST00000580646 K7EQG2 157 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 COX7A2P2O60397 106 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 OR5G3P0C626 314 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 SFTA3P0C7M3 94 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 RPL7P18124 248 aaKnown RBP7.37□□□□□ -1.23
GGA3-209ENST00000580646 CEBPGP53567 150 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 MIC13Q5XKP0 118 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 LINC00305Q7Z4B0 112 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 OR8I2Q8N0Y5 310 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 DCANP1Q8TF63 244 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 PSMG3Q9BT73 122 aaPredicted RBP7.37□□□□□ -1.23
GGA3-209ENST00000580646 SMIM3Q9BZL3 60 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 ACTR3CQ9C0K3 210 aaPredicted RBP7.37□□□□□ -1.23
GGA3-209ENST00000580646 WFDC1Q9HC57 220 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 NRN1Q9NPD7 142 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 RPS10P5Q9NQ39 176 aa7.37□□□□□ -1.23
GGA3-209ENST00000580646 A0A087X0K7 114 aa7.36□□□□□ -1.23
GGA3-209ENST00000580646 JTBO76095 146 aa7.36□□□□□ -1.23
GGA3-209ENST00000580646 GCGP01275 180 aa7.36□□□□□ -1.23
GGA3-209ENST00000580646 CD7P09564 240 aa7.36□□□□□ -1.23
GGA3-209ENST00000580646 GALR1P47211 349 aa7.36□□□□□ -1.23
GGA3-209ENST00000580646 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
GGA3-209ENST00000580646 JOSD1Q15040 202 aaPredicted RBP7.36□□□□□ -1.23
GGA3-209ENST00000580646 C10orf113Q5VZT2 155 aa7.36□□□□□ -1.23
GGA3-209ENST00000580646 OR2G3Q8NGZ4 309 aa7.36□□□□□ -1.23
GGA3-209ENST00000580646 TM2D3Q9BRN9 247 aa7.36□□□□□ -1.23
GGA3-209ENST00000580646 MRPL32Q9BYC8 188 aaKnown RBP7.36□□□□□ -1.23
GGA3-209ENST00000580646 DOK5Q9P104 306 aa7.36□□□□□ -1.23
GGA3-209ENST00000580646 BORCS7-ASMTA0A0B4J1R7 106 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 PPBPP02775 128 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 SERF2P84101 59 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 ODF3L2Q3SX64 289 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 LEMD1Q68G75 181 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 BPIFA4PQ86YQ2 179 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 STXBP6Q8NFX7 210 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 UHRF2Q96PU4 802 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 RSG1Q9BU20 258 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 SCRT1Q9BWW7 348 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 SLC25A22Q9H936 323 aa7.35□□□□□ -1.23
GGA3-209ENST00000580646 OR11H12B2RN74 326 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 C3orf84H3BNL1 204 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 K7EP13 123 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 SOCS3O14543 225 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 MRPS12O15235 138 aaKnown RBP7.34□□□□□ -1.23
GGA3-209ENST00000580646 PSMB3P49720 205 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 NDUFA6P56556 154 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 SNRPD3P62318 126 aaKnown RBP7.34□□□□□ -1.23
GGA3-209ENST00000580646 SSX7Q7RTT5 188 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 HIST3H2BBQ8N257 126 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 GBGT1Q8N5D6 347 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 NUDT10Q8NFP7 164 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 OR2D3Q8NGH3 330 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 GNPNAT1Q96EK6 184 aaPredicted RBP7.34□□□□□ -1.23
GGA3-209ENST00000580646 FAM210BQ96KR6 192 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 PRO1933Q9H354 126 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 SMDT1Q9H4I9 107 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 MAP6D1Q9H9H5 199 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 TMEM14CQ9P0S9 112 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 SELENOKQ9Y6D0 94 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 DNAH7Q8WXX0 4024 aa7.34□□□□□ -1.23
GGA3-209ENST00000580646 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 C7orf77A4D0Y5 90 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 ISLRO14498 428 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 EREGO14944 169 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 ZNF253O75346 499 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 ATP6V0CP27449 155 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 ID1P41134 155 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 RBX1P62877 108 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 GUK1Q16774 197 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 ACOT6Q3I5F7 207 aaPredicted RBP7.33□□□□□ -1.24
GGA3-209ENST00000580646 FFAR4Q5NUL3 377 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 FAM78BQ5VT40 261 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 RPL7L1Q6DKI1 246 aaKnown RBP7.33□□□□□ -1.24
GGA3-209ENST00000580646 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 LINC00322Q6ZN03 302 aaPredicted RBP7.33□□□□□ -1.24
GGA3-209ENST00000580646 BAP18Q8IXM2 172 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 DEFB125Q8N687 156 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 MUC7Q8TAX7 377 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 PACRGQ96M98 296 aaPredicted RBP7.33□□□□□ -1.24
GGA3-209ENST00000580646 C17orf77Q96MU5 243 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 SPATA25Q9BR10 227 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 HRH4Q9H3N8 390 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 CYTL1Q9NRR1 136 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 FUT9Q9Y231 359 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 DNAH1Q9P2D7 4330 aa7.33□□□□□ -1.24
GGA3-209ENST00000580646 AGRNO00468 2067 aa7.32□□□□□ -1.24
GGA3-209ENST00000580646 M0R036 132 aa7.32□□□□□ -1.24
GGA3-209ENST00000580646 IGLC2P0DOY2 106 aa7.32□□□□□ -1.24
GGA3-209ENST00000580646 TFPI2P48307 235 aa7.32□□□□□ -1.24
GGA3-209ENST00000580646 ERVFC1-1P60608 527 aa7.32□□□□□ -1.24
GGA3-209ENST00000580646 RHOBP62745 196 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms