RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TRGV2A0A075B6R0 118 aa12.4□□□□□ -0.42
MKS1-209ENST00000580127 IAH1Q2TAA2 248 aaPredicted RBP12.4□□□□□ -0.42
MKS1-209ENST00000580127 C12orf45Q8N5I9 185 aaPredicted RBP12.4□□□□□ -0.42
MKS1-209ENST00000580127 ZBTB8BQ8NAP8 495 aaPredicted RBP12.4□□□□□ -0.42
MKS1-209ENST00000580127 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
MKS1-209ENST00000580127 V9GYH0 126 aa12.4□□□□□ -0.42
MKS1-209ENST00000580127 TRAV12-3A0A0B4J271 114 aa12.39□□□□□ -0.43
MKS1-209ENST00000580127 L7N2F9 121 aa12.39□□□□□ -0.43
MKS1-209ENST00000580127 NDUFB6O95139 128 aa12.39□□□□□ -0.43
MKS1-209ENST00000580127 OR4E1P0C645 316 aa12.39□□□□□ -0.43
MKS1-209ENST00000580127 HOXA5P20719 270 aa12.39□□□□□ -0.43
MKS1-209ENST00000580127 VAMP2P63027 116 aa12.39□□□□□ -0.43
MKS1-209ENST00000580127 ZNF680Q8NEM1 530 aa12.39□□□□□ -0.43
MKS1-209ENST00000580127 ZNF586Q9NXT0 402 aa12.39□□□□□ -0.43
MKS1-209ENST00000580127 J3KRW8 73 aa12.38□□□□□ -0.43
MKS1-209ENST00000580127 CCNKO75909 580 aa12.38□□□□□ -0.43
MKS1-209ENST00000580127 SNRPCP09234 159 aaKnown RBP12.38□□□□□ -0.43
MKS1-209ENST00000580127 ZNF846Q147U1 533 aa12.38□□□□□ -0.43
MKS1-209ENST00000580127 CNPY1Q3B7I2 92 aa12.38□□□□□ -0.43
MKS1-209ENST00000580127 TRIQKQ629K1 86 aa12.38□□□□□ -0.43
MKS1-209ENST00000580127 OR1L4Q8NGR5 311 aa12.38□□□□□ -0.43
MKS1-209ENST00000580127 PFDN5Q99471 154 aa12.38□□□□□ -0.43
MKS1-209ENST00000580127 CCDC160A6NGH7 325 aa12.37□□□□□ -0.43
MKS1-209ENST00000580127 SLC25A5P05141 298 aaKnown RBP12.37□□□□□ -0.43
MKS1-209ENST00000580127 CT45A10P0DMU9 189 aa12.37□□□□□ -0.43
MKS1-209ENST00000580127 PRB4P10163 310 aaPredicted RBP12.37□□□□□ -0.43
MKS1-209ENST00000580127 CAMLGP49069 296 aa12.37□□□□□ -0.43
MKS1-209ENST00000580127 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
MKS1-209ENST00000580127 TMEM37Q8WXS4 190 aa12.37□□□□□ -0.43
MKS1-209ENST00000580127 PRAC2D3DTV9 90 aa12.36□□□□□ -0.43
MKS1-209ENST00000580127 SIVA1O15304 175 aa12.36□□□□□ -0.43
MKS1-209ENST00000580127 IGLC2P0DOY2 106 aa12.36□□□□□ -0.43
MKS1-209ENST00000580127 OPCMLQ14982 345 aa12.36□□□□□ -0.43
MKS1-209ENST00000580127 ZNF431Q8TF32 576 aaPredicted RBP12.36□□□□□ -0.43
MKS1-209ENST00000580127 SAT2Q96F10 170 aaPredicted RBP12.36□□□□□ -0.43
MKS1-209ENST00000580127 PARD6GQ9BYG4 376 aaPredicted RBP12.36□□□□□ -0.43
MKS1-209ENST00000580127 C20orf85Q9H1P6 137 aa12.36□□□□□ -0.43
MKS1-209ENST00000580127 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
MKS1-209ENST00000580127 TRAV9-2A0A087WT02 112 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 NPIPB6E9PJ23 425 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 H3BTX0 84 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 ZNF253O75346 499 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 BCAP31P51572 246 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 KRTAP10-2P60368 255 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 SLAQ13239 276 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 Q6ZTI0 123 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 LINC00477Q96M19 166 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 C18orf15Q96N68 181 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 KRTAP1-5Q9BYS1 174 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 PRELID1Q9Y255 219 aa12.35□□□□□ -0.43
MKS1-209ENST00000580127 C7orf66A4D0T2 115 aa12.34□□□□□ -0.43
MKS1-209ENST00000580127 C7orf71A4D174 169 aa12.34□□□□□ -0.43
MKS1-209ENST00000580127 EPM2AB3EWF7 344 aa12.34□□□□□ -0.43
MKS1-209ENST00000580127 H3BQ15 152 aa12.34□□□□□ -0.43
MKS1-209ENST00000580127 SLC17A3O00476 420 aa12.34□□□□□ -0.43
MKS1-209ENST00000580127 NFE4Q86UQ8 179 aa12.34□□□□□ -0.43
MKS1-209ENST00000580127 MGST2Q99735 147 aa12.34□□□□□ -0.43
MKS1-209ENST00000580127 FLVCR2Q9UPI3 526 aa12.34□□□□□ -0.43
MKS1-209ENST00000580127 FUT9Q9Y231 359 aa12.34□□□□□ -0.43
MKS1-209ENST00000580127 TRGV1A0A0A0MS02 117 aa12.33□□□□□ -0.44
MKS1-209ENST00000580127 PVALBP20472 110 aaPredicted RBP12.33□□□□□ -0.44
MKS1-209ENST00000580127 NRARPQ7Z6K4 114 aa12.33□□□□□ -0.44
MKS1-209ENST00000580127 EIF4E3Q8N5X7 224 aaKnown RBP12.33□□□□□ -0.44
MKS1-209ENST00000580127 MITD1Q8WV92 249 aa12.33□□□□□ -0.44
MKS1-209ENST00000580127 MRPL53Q96EL3 112 aaKnown RBP12.33□□□□□ -0.44
MKS1-209ENST00000580127 LINC00467Q9BRT7 94 aa12.33□□□□□ -0.44
MKS1-209ENST00000580127 GSN-AS1Q9NRJ2 163 aa12.33□□□□□ -0.44
MKS1-209ENST00000580127 TIMM9Q9Y5J7 89 aa12.33□□□□□ -0.44
MKS1-209ENST00000580127 ICOSQ9Y6W8 199 aa12.33□□□□□ -0.44
MKS1-209ENST00000580127 A0A096LPF7 62 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 PAX4O43316 350 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 MPDU1O75352 247 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 IFNA5P01569 189 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 MBPP02686 304 aaPredicted RBP12.32□□□□□ -0.44
MKS1-209ENST00000580127 GPX1P07203 203 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 LINC00315P59091 139 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 ERVFC1-1P60608 527 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 ARL16Q0P5N6 197 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 ANXA2RQ3ZCQ2 193 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 VSIG2Q96IQ7 327 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 UQCC1Q9NVA1 299 aa12.32□□□□□ -0.44
MKS1-209ENST00000580127 RCL1Q9Y2P8 373 aaKnown RBP12.32□□□□□ -0.44
MKS1-209ENST00000580127 LINC00854A0A1B0GVQ3 168 aa12.31□□□□□ -0.44
MKS1-209ENST00000580127 ZNF324O75467 553 aaPredicted RBP12.31□□□□□ -0.44
MKS1-209ENST00000580127 NMBP08949 121 aa12.31□□□□□ -0.44
MKS1-209ENST00000580127 HIST1H1EP10412 219 aaKnown RBP12.31□□□□□ -0.44
MKS1-209ENST00000580127 RNASE4P34096 147 aaKnown RBP12.31□□□□□ -0.44
MKS1-209ENST00000580127 CAV2P51636 162 aa12.31□□□□□ -0.44
MKS1-209ENST00000580127 SRRQ9GZT4 340 aa12.31□□□□□ -0.44
MKS1-209ENST00000580127 AAMDCQ9H7C9 122 aa12.31□□□□□ -0.44
MKS1-209ENST00000580127 HSPG2P98160 4391 aa12.31□□□□□ -0.44
MKS1-209ENST00000580127 TRAV5A0A0B4J249 113 aa12.3□□□□□ -0.44
MKS1-209ENST00000580127 RGS13O14921 159 aa12.3□□□□□ -0.44
MKS1-209ENST00000580127 S100A11P31949 105 aa12.3□□□□□ -0.44
MKS1-209ENST00000580127 RPL29P47914 159 aaKnown RBP12.3□□□□□ -0.44
MKS1-209ENST00000580127 PDE6HQ13956 83 aa12.3□□□□□ -0.44
MKS1-209ENST00000580127 MORN5Q5VZ52 161 aa12.3□□□□□ -0.44
MKS1-209ENST00000580127 MIC13Q5XKP0 118 aa12.3□□□□□ -0.44
MKS1-209ENST00000580127 SLC39A9Q9NUM3 307 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms