RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 UBE2L3P68036 154 aaKnown RBP17.3■□□□□ 0.36
ERBB2-209ENST00000578709 TMUB2Q71RG4 321 aa17.3■□□□□ 0.36
ERBB2-209ENST00000578709 CSNK1G2-AS1Q8NCQ2 148 aa17.3■□□□□ 0.36
ERBB2-209ENST00000578709 EDA2RQ9HAV5 297 aa17.3■□□□□ 0.36
ERBB2-209ENST00000578709 PRELID1Q9Y255 219 aa17.3■□□□□ 0.36
ERBB2-209ENST00000578709 ZNF705DP0CH99 300 aaPredicted RBP17.29■□□□□ 0.36
ERBB2-209ENST00000578709 ZNF705BP0CI00 300 aaPredicted RBP17.29■□□□□ 0.36
ERBB2-209ENST00000578709 RAB24Q969Q5 203 aa17.29■□□□□ 0.36
ERBB2-209ENST00000578709 PRAC2D3DTV9 90 aa17.28■□□□□ 0.36
ERBB2-209ENST00000578709 STAG3L2P0CL84 134 aa17.28■□□□□ 0.36
ERBB2-209ENST00000578709 STAG3L3P0CL85 134 aa17.28■□□□□ 0.36
ERBB2-209ENST00000578709 HIST1H1AQ02539 215 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-209ENST00000578709 PHYHIPLQ96FC7 376 aa17.28■□□□□ 0.36
ERBB2-209ENST00000578709 HYLS1Q96M11 299 aa17.28■□□□□ 0.36
ERBB2-209ENST00000578709 ACTR3CQ9C0K3 210 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-209ENST00000578709 SLC35B3Q9H1N7 401 aa17.28■□□□□ 0.36
ERBB2-209ENST00000578709 AAMDCQ9H7C9 122 aa17.28■□□□□ 0.36
ERBB2-209ENST00000578709 XCL2Q9UBD3 114 aa17.28■□□□□ 0.36
ERBB2-209ENST00000578709 LGALSLQ3ZCW2 172 aaPredicted RBP17.27■□□□□ 0.36
ERBB2-209ENST00000578709 LYPD1Q8N2G4 141 aa17.27■□□□□ 0.36
ERBB2-209ENST00000578709 EXOC3-AS1Q8N2X6 119 aa17.27■□□□□ 0.36
ERBB2-209ENST00000578709 ZNF471Q9BX82 626 aaPredicted RBP17.27■□□□□ 0.36
ERBB2-209ENST00000578709 M0R3E3 92 aa17.26■□□□□ 0.35
ERBB2-209ENST00000578709 HMGB3O15347 200 aaKnown RBP17.26■□□□□ 0.35
ERBB2-209ENST00000578709 PFDN1O60925 122 aa17.26■□□□□ 0.35
ERBB2-209ENST00000578709 ARL14EPLP0DKL9 152 aa17.26■□□□□ 0.35
ERBB2-209ENST00000578709 PRB4P10163 310 aaPredicted RBP17.26■□□□□ 0.35
ERBB2-209ENST00000578709 CD300CQ08708 224 aa17.26■□□□□ 0.35
ERBB2-209ENST00000578709 ICAM4Q14773 271 aa17.26■□□□□ 0.35
ERBB2-209ENST00000578709 AKR1C8PQ5T2L2 129 aa17.26■□□□□ 0.35
ERBB2-209ENST00000578709 OR11H2Q8NH07 326 aa17.26■□□□□ 0.35
ERBB2-209ENST00000578709 RARRES2Q99969 163 aa17.26■□□□□ 0.35
ERBB2-209ENST00000578709 FXYD7P58549 80 aa17.25■□□□□ 0.35
ERBB2-209ENST00000578709 EIF5AP63241 154 aaKnown RBP17.25■□□□□ 0.35
ERBB2-209ENST00000578709 OR10J6PQ8NGY7 276 aa17.25■□□□□ 0.35
ERBB2-209ENST00000578709 ZNF705EA8MWA4 302 aaPredicted RBP17.24■□□□□ 0.35
ERBB2-209ENST00000578709 SEC11BP0C7V7 166 aa17.24■□□□□ 0.35
ERBB2-209ENST00000578709 RANP62826 216 aaKnown RBP17.24■□□□□ 0.35
ERBB2-209ENST00000578709 ZNF726P1Q15940 193 aa17.24■□□□□ 0.35
ERBB2-209ENST00000578709 SSX7Q7RTT5 188 aa17.24■□□□□ 0.35
ERBB2-209ENST00000578709 STOML3Q8TAV4 291 aa17.24■□□□□ 0.35
ERBB2-209ENST00000578709 SUN5Q8TC36 379 aa17.24■□□□□ 0.35
ERBB2-209ENST00000578709 DNAH7Q8WXX0 4024 aa17.24■□□□□ 0.35
ERBB2-209ENST00000578709 CTXND1A0A1B0GTU2 59 aa17.23■□□□□ 0.35
ERBB2-209ENST00000578709 BOLA2-SMG1P6H3BVE0 249 aa17.23■□□□□ 0.35
ERBB2-209ENST00000578709 AMBPP02760 352 aa17.23■□□□□ 0.35
ERBB2-209ENST00000578709 BAP18Q8IXM2 172 aa17.23■□□□□ 0.35
ERBB2-209ENST00000578709 Q9H3A6 140 aa17.23■□□□□ 0.35
ERBB2-209ENST00000578709 NPIPB6E9PJ23 425 aa17.22■□□□□ 0.35
ERBB2-209ENST00000578709 CXorf1O96002 111 aa17.22■□□□□ 0.35
ERBB2-209ENST00000578709 GCHFRP30047 84 aa17.22■□□□□ 0.35
ERBB2-209ENST00000578709 M0R2Z0 102 aa17.21■□□□□ 0.35
ERBB2-209ENST00000578709 TPT1P13693 172 aaKnown RBP17.21■□□□□ 0.35
ERBB2-209ENST00000578709 SPINK13Q1W4C9 94 aa17.21■□□□□ 0.35
ERBB2-209ENST00000578709 ZNF705AQ6ZN79 300 aaPredicted RBP17.21■□□□□ 0.35
ERBB2-209ENST00000578709 OTORQ9NRC9 128 aa17.21■□□□□ 0.35
ERBB2-209ENST00000578709 PLA2G2EQ9NZK7 142 aa17.21■□□□□ 0.35
ERBB2-209ENST00000578709 X6R8D5 127 aa17.21■□□□□ 0.35
ERBB2-209ENST00000578709 ZFP69Q49AA0 526 aa17.2■□□□□ 0.34
ERBB2-209ENST00000578709 IGF2BP2-AS1Q96M15 143 aa17.2■□□□□ 0.34
ERBB2-209ENST00000578709 ODF3Q96PU9 254 aa17.2■□□□□ 0.34
ERBB2-209ENST00000578709 PPP1R14DQ9NXH3 145 aa17.2■□□□□ 0.34
ERBB2-209ENST00000578709 A0A0J9YWU9 116 aa17.19■□□□□ 0.34
ERBB2-209ENST00000578709 UMAD1C9J7I0 102 aa17.19■□□□□ 0.34
ERBB2-209ENST00000578709 CRXO43186 299 aaPredicted RBP17.19■□□□□ 0.34
ERBB2-209ENST00000578709 C9orf62Q8N4C0 152 aa17.19■□□□□ 0.34
ERBB2-209ENST00000578709 C11orf68Q9H3H3 251 aaKnown RBP17.19■□□□□ 0.34
ERBB2-209ENST00000578709 TMEM167BQ9NRX6 74 aa17.19■□□□□ 0.34
ERBB2-209ENST00000578709 CT45A10P0DMU9 189 aa17.18■□□□□ 0.34
ERBB2-209ENST00000578709 MIFP14174 115 aa17.18■□□□□ 0.34
ERBB2-209ENST00000578709 C9orf47Q6ZRZ4 202 aa17.18■□□□□ 0.34
ERBB2-209ENST00000578709 Q8NAQ8 132 aa17.18■□□□□ 0.34
ERBB2-209ENST00000578709 NEU1Q99519 415 aa17.18■□□□□ 0.34
ERBB2-209ENST00000578709 CDKN1BP46527 198 aa17.17■□□□□ 0.34
ERBB2-209ENST00000578709 CSN1S1P47710 185 aa17.17■□□□□ 0.34
ERBB2-209ENST00000578709 C1orf158Q8N1D5 194 aa17.17■□□□□ 0.34
ERBB2-209ENST00000578709 ARL6IP6Q8N6S5 226 aa17.17■□□□□ 0.34
ERBB2-209ENST00000578709 RXFP4Q8TDU9 374 aa17.17■□□□□ 0.34
ERBB2-209ENST00000578709 TMED6Q8WW62 240 aa17.17■□□□□ 0.34
ERBB2-209ENST00000578709 LINC00477Q96M19 166 aa17.17■□□□□ 0.34
ERBB2-209ENST00000578709 AGPAT4-IT1Q9H0P7 198 aa17.17■□□□□ 0.34
ERBB2-209ENST00000578709 GOLT1BQ9Y3E0 138 aa17.17■□□□□ 0.34
ERBB2-209ENST00000578709 IGKV2-40A0A087WW87 121 aaPredicted RBP17.16■□□□□ 0.34
ERBB2-209ENST00000578709 PGPA6NDG6 321 aa17.16■□□□□ 0.34
ERBB2-209ENST00000578709 INSP01308 110 aa17.16■□□□□ 0.34
ERBB2-209ENST00000578709 IGKV2D-40P01614 121 aaPredicted RBP17.16■□□□□ 0.34
ERBB2-209ENST00000578709 TSPOP30536 169 aa17.16■□□□□ 0.34
ERBB2-209ENST00000578709 FHITP49789 147 aa17.16■□□□□ 0.34
ERBB2-209ENST00000578709 ERCC8Q13216 396 aa17.16■□□□□ 0.34
ERBB2-209ENST00000578709 FAM74A1Q5RGS3 127 aa17.16■□□□□ 0.34
ERBB2-209ENST00000578709 SLC51BQ86UW2 128 aa17.16■□□□□ 0.34
ERBB2-209ENST00000578709 MUC7Q8TAX7 377 aa17.16■□□□□ 0.34
ERBB2-209ENST00000578709 RBAKDNA6NC62 111 aa17.15■□□□□ 0.34
ERBB2-209ENST00000578709 MAP1LC3B2A6NCE7 125 aa17.15■□□□□ 0.34
ERBB2-209ENST00000578709 DPPA3Q6W0C5 159 aa17.15■□□□□ 0.34
ERBB2-209ENST00000578709 VGLL1Q99990 258 aa17.15■□□□□ 0.34
ERBB2-209ENST00000578709 MAP1LC3BQ9GZQ8 125 aa17.15■□□□□ 0.34
ERBB2-209ENST00000578709 TRAV12-2A0A075B6T6 113 aa17.14■□□□□ 0.33
ERBB2-209ENST00000578709 IGHV4-28A0A0C4DH34 117 aa17.14■□□□□ 0.33
ERBB2-209ENST00000578709 SMIM9A6NGZ8 99 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms