RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SORL1Q92673 2214 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 RBMY1BA6NDE4 496 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 RBMY1EA6NEQ0 496 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 FAM74A7A6NL05 159 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 SLC17A3O00476 420 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 RBMY1DP0C7P1 496 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 RAB14P61106 215 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 SNRPD3P62318 126 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 PSG3Q16557 428 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 C16orf92Q96LL3 132 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 MANBALQ9NQG1 85 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 OTORQ9NRC9 128 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 MED9Q9NWA0 146 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 STARD9Q9P2P6 4700 aa8.28□□□□□ -1.08
CDK5RAP3-204ENST00000577664 RANP62826 216 aaKnown RBP8.27□□□□□ -1.09
CDK5RAP3-204ENST00000577664 Q8N1Y9 231 aa8.27□□□□□ -1.09
CDK5RAP3-204ENST00000577664 GBGT1Q8N5D6 347 aa8.27□□□□□ -1.09
CDK5RAP3-204ENST00000577664 RXFP4Q8TDU9 374 aa8.27□□□□□ -1.09
CDK5RAP3-204ENST00000577664 BLNKQ8WV28 456 aa8.27□□□□□ -1.09
CDK5RAP3-204ENST00000577664 CLUHP3Q96NS8 147 aa8.27□□□□□ -1.09
CDK5RAP3-204ENST00000577664 Q9H3A6 140 aa8.27□□□□□ -1.09
CDK5RAP3-204ENST00000577664 SMDT1Q9H4I9 107 aa8.27□□□□□ -1.09
CDK5RAP3-204ENST00000577664 PPP1R14DQ9NXH3 145 aa8.27□□□□□ -1.09
CDK5RAP3-204ENST00000577664 RBAKDNA6NC62 111 aa8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 PGPA6NDG6 321 aa8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 A8MTW9 85 aa8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 KRTAP10-11P60412 298 aa8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 ODF3L2Q3SX64 289 aa8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 FAM24BQ8N5W8 94 aa8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 C20orf173Q96LM9 149 aa8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 FAM210AQ96ND0 272 aa8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 AAMDCQ9H7C9 122 aa8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 YTHDF2Q9Y5A9 579 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP3-204ENST00000577664 IGKV3-7A0A075B6H7 116 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 SERTM2A0A1B0GWG4 89 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 A8MZ25 164 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 GGTLC3B5MD39 225 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 PAGE4O60829 102 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 IFNA1P01562 189 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 SLC25A5P05141 298 aaKnown RBP8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 SUMO1P63165 101 aaKnown RBP8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 ICAM4Q14773 271 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 GUCA2BQ16661 112 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 EXOC3-AS1Q8N2X6 119 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 C5orf17Q8NAS9 161 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 HIST1H2BAQ96A08 127 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 MAP6D1Q9H9H5 199 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 VAX2Q9UIW0 290 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 EPDR1Q9UM22 224 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 SELENOKQ9Y6D0 94 aa8.25□□□□□ -1.09
CDK5RAP3-204ENST00000577664 HUWE1Q7Z6Z7 4374 aaKnown RBP8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 RAB19A4D1S5 217 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 RBFOX3A6NFN3 312 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 H3BTX0 84 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 SNRPCP09234 159 aaKnown RBP8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 CD7P09564 240 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 BCL2P10415 239 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 TFPI2P48307 235 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 ZNF506Q5JVG8 444 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 FOXI2Q6ZQN5 318 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 SAV1Q9H4B6 383 aaPredicted RBP8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 GNG13Q9P2W3 67 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 KLF12Q9Y4X4 402 aa8.24□□□□□ -1.09
CDK5RAP3-204ENST00000577664 TRBV7-9A0A0J9YWB2 115 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 A0A0J9YX75 114 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 LOC102723971A0A1B0GUV8 181 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 LINC00862A6NCI5 91 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 FBLL1A6NHQ2 334 aaKnown RBP8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 OR11H12B2RN74 326 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 DIRC3C9JPN6 131 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 M0R3E3 92 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 PDE6DO43924 150 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 ZNF688P0C7X2 276 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 HLA-DMBP28068 263 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 CSN1S1P47710 185 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 DEFB131AP59861 70 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 CD81P60033 236 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 MEF2BQ02080 365 aaPredicted RBP8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 IGFL4Q6B9Z1 124 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 C9orf47Q6ZRZ4 202 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 GTSCR1Q86UQ5 136 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 EIF4E3Q8N5X7 224 aaKnown RBP8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 RNF182Q8N6D2 247 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 C11orf52Q96A22 123 aa8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 RPUSD4Q96CM3 377 aaKnown RBP8.23□□□□□ -1.09
CDK5RAP3-204ENST00000577664 TRBV6-1A0A0K0K1D8 114 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 A0A1B0GV50 99 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 ZNF705FA8MVS1 300 aaPredicted RBP8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 C11orf94C9JXX5 98 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 F6UZH7 168 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 TMEM250H0YL14 139 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 H3BMM0 161 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 TCRAP04437 139 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 UBE2G2P60604 165 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 PSMG4Q5JS54 123 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 IQCF2Q8IXL9 164 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 OR8A1Q8NGG7 326 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 CMTM2Q8TAZ6 248 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 PCNPQ8WW12 178 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms