RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 NHLH2Q02577 135 aa9.78□□□□□ -0.84
GTF3C1-211ENST00000569653 FGL1Q08830 312 aa9.78□□□□□ -0.84
GTF3C1-211ENST00000569653 OPCMLQ14982 345 aa9.78□□□□□ -0.84
GTF3C1-211ENST00000569653 MIC13Q5XKP0 118 aa9.78□□□□□ -0.84
GTF3C1-211ENST00000569653 Q6ZR54 194 aa9.78□□□□□ -0.84
GTF3C1-211ENST00000569653 BPIFA4PQ86YQ2 179 aa9.78□□□□□ -0.84
GTF3C1-211ENST00000569653 MBD2Q9UBB5 411 aa9.78□□□□□ -0.84
GTF3C1-211ENST00000569653 MUC4Q99102 2169 aa9.78□□□□□ -0.84
GTF3C1-211ENST00000569653 IGLV2-18A0A075B6J9 118 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 GIPP09681 153 aaPredicted RBP9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 CXCL2P19875 107 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 RRN3P1Q2M238 152 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 MORN5Q5VZ52 161 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 TMEM88Q6PEY1 159 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 Q6ZNX1 250 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 LINC00336Q6ZUF6 198 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 LRRC20Q8TCA0 184 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 TMEM37Q8WXS4 190 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 NPCDR1Q9BY65 106 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 DNAJC4Q9NNZ3 241 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 KCNIP2Q9NS61 270 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 SLC39A9Q9NUM3 307 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 PXMP4Q9Y6I8 212 aa9.77□□□□□ -0.85
GTF3C1-211ENST00000569653 SNRPCP09234 159 aaKnown RBP9.76□□□□□ -0.85
GTF3C1-211ENST00000569653 CLINT1Q14677 625 aa9.76□□□□□ -0.85
GTF3C1-211ENST00000569653 LCN15Q6UWW0 184 aa9.76□□□□□ -0.85
GTF3C1-211ENST00000569653 THAP6Q8TBB0 222 aa9.76□□□□□ -0.85
GTF3C1-211ENST00000569653 ABCA13Q86UQ4 5058 aa9.76□□□□□ -0.85
GTF3C1-211ENST00000569653 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
GTF3C1-211ENST00000569653 LGALS9BQ3B8N2 356 aa9.75□□□□□ -0.85
GTF3C1-211ENST00000569653 ZNF738Q8NE65 137 aa9.75□□□□□ -0.85
GTF3C1-211ENST00000569653 ATP5SQ99766 215 aa9.75□□□□□ -0.85
GTF3C1-211ENST00000569653 SLC50A1Q9BRV3 221 aa9.75□□□□□ -0.85
GTF3C1-211ENST00000569653 HSPB11Q9Y547 144 aa9.75□□□□□ -0.85
GTF3C1-211ENST00000569653 PRSS29PA6NIE9 313 aa9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 BOLA2-SMG1P6H3BVE0 249 aa9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 DUSP14O95147 198 aaKnown RBP9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 INSP01308 110 aa9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 RPL12P30050 165 aaKnown RBP9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 DAD1P61803 113 aa9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 HIST1H1AQ02539 215 aaPredicted RBP9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 OR8A1Q8NGG7 326 aa9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 ASB13Q8WXK3 278 aa9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 FAM210BQ96KR6 192 aa9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 TMEM208Q9BTX3 173 aa9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 PARD6GQ9BYG4 376 aaPredicted RBP9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 WDR61Q9GZS3 305 aaKnown RBP9.74□□□□□ -0.85
GTF3C1-211ENST00000569653 TEX48A0A1B0GUV7 120 aa9.73□□□□□ -0.85
GTF3C1-211ENST00000569653 PRAC2D3DTV9 90 aa9.73□□□□□ -0.85
GTF3C1-211ENST00000569653 C17orf112F2Z3M2 114 aa9.73□□□□□ -0.85
GTF3C1-211ENST00000569653 H3BTX0 84 aa9.73□□□□□ -0.85
GTF3C1-211ENST00000569653 SLC17A3O00476 420 aa9.73□□□□□ -0.85
GTF3C1-211ENST00000569653 PSG3Q16557 428 aa9.73□□□□□ -0.85
GTF3C1-211ENST00000569653 GUK1Q16774 197 aa9.73□□□□□ -0.85
GTF3C1-211ENST00000569653 HSPG2P98160 4391 aa9.72□□□□□ -0.85
GTF3C1-211ENST00000569653 SMLR1H3BR10 107 aa9.72□□□□□ -0.85
GTF3C1-211ENST00000569653 IGLC2P0DOY2 106 aa9.72□□□□□ -0.85
GTF3C1-211ENST00000569653 TSPOP30536 169 aa9.72□□□□□ -0.85
GTF3C1-211ENST00000569653 UBE2DNLQ8IWF7 75 aa9.72□□□□□ -0.85
GTF3C1-211ENST00000569653 OR2T35Q8NGX2 323 aa9.72□□□□□ -0.85
GTF3C1-211ENST00000569653 WFDC1Q9HC57 220 aa9.72□□□□□ -0.85
GTF3C1-211ENST00000569653 ZNF331Q9NQX6 463 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-211ENST00000569653 LRP1BQ9NZR2 4599 aa9.72□□□□□ -0.85
GTF3C1-211ENST00000569653 TRAV5A0A0B4J249 113 aa9.71□□□□□ -0.86
GTF3C1-211ENST00000569653 H3BQ15 152 aa9.71□□□□□ -0.86
GTF3C1-211ENST00000569653 IFNA5P01569 189 aa9.71□□□□□ -0.86
GTF3C1-211ENST00000569653 DEFB130BP0DP73 79 aa9.71□□□□□ -0.86
GTF3C1-211ENST00000569653 DEFB130AP0DP74 79 aa9.71□□□□□ -0.86
GTF3C1-211ENST00000569653 RPUSD4Q96CM3 377 aaKnown RBP9.71□□□□□ -0.86
GTF3C1-211ENST00000569653 TMEM14CQ9P0S9 112 aa9.71□□□□□ -0.86
GTF3C1-211ENST00000569653 A0A1B0GVG6 124 aa9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 RNF222A6NCQ9 220 aa9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 LYRM9A8MSI8 78 aa9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 ZNF253O75346 499 aa9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 RNF212Q495C1 297 aa9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 GCSAMLQ5JQS6 135 aa9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 SCGB1C1Q8TD33 95 aa9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 AQP10Q96PS8 301 aa9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 MRPL32Q9BYC8 188 aaKnown RBP9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 SMIM3Q9BZL3 60 aa9.7□□□□□ -0.86
GTF3C1-211ENST00000569653 RHOBP62745 196 aa9.69□□□□□ -0.86
GTF3C1-211ENST00000569653 ZNF575Q86XF7 245 aa9.69□□□□□ -0.86
GTF3C1-211ENST00000569653 OR11H4Q8NGC9 324 aa9.69□□□□□ -0.86
GTF3C1-211ENST00000569653 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
GTF3C1-211ENST00000569653 SAT2Q96F10 170 aaPredicted RBP9.69□□□□□ -0.86
GTF3C1-211ENST00000569653 ST6GAL2Q96JF0 529 aa9.69□□□□□ -0.86
GTF3C1-211ENST00000569653 LINC01587Q99440 93 aa9.69□□□□□ -0.86
GTF3C1-211ENST00000569653 PPP1R14DQ9NXH3 145 aa9.69□□□□□ -0.86
GTF3C1-211ENST00000569653 TNFSF18Q9UNG2 199 aa9.69□□□□□ -0.86
GTF3C1-211ENST00000569653 TRBV19A0A075B6N1 114 aa9.68□□□□□ -0.86
GTF3C1-211ENST00000569653 HIST1H1EP10412 219 aaKnown RBP9.68□□□□□ -0.86
GTF3C1-211ENST00000569653 PDE6HQ13956 83 aa9.68□□□□□ -0.86
GTF3C1-211ENST00000569653 GFI1BQ5VTD9 330 aa9.68□□□□□ -0.86
GTF3C1-211ENST00000569653 OR10J6PQ8NGY7 276 aa9.68□□□□□ -0.86
GTF3C1-211ENST00000569653 SLC25A2Q9BXI2 301 aa9.68□□□□□ -0.86
GTF3C1-211ENST00000569653 ZNF586Q9NXT0 402 aa9.68□□□□□ -0.86
GTF3C1-211ENST00000569653 hCG_2014768A0A024R1R8 64 aa9.67□□□□□ -0.86
GTF3C1-211ENST00000569653 FXYD6-FXYD2A0A087WZ82 144 aa9.67□□□□□ -0.86
GTF3C1-211ENST00000569653 F5H768 121 aa9.67□□□□□ -0.86
GTF3C1-211ENST00000569653 PYYP10082 97 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms