RNA–Protein interactions for RNA: ENST00000568366.5

TSC2-221, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-221ENST00000568366 DKK2Q9UBU2 259 aa12.4□□□□□ -0.42
TSC2-221ENST00000568366 ZNF705GA8MUZ8 300 aaPredicted RBP12.39□□□□□ -0.43
TSC2-221ENST00000568366 PRAC2D3DTV9 90 aa12.39□□□□□ -0.43
TSC2-221ENST00000568366 C17orf112F2Z3M2 114 aa12.39□□□□□ -0.43
TSC2-221ENST00000568366 ZNF253O75346 499 aa12.39□□□□□ -0.43
TSC2-221ENST00000568366 PYYP10082 97 aa12.39□□□□□ -0.43
TSC2-221ENST00000568366 RPL12P30050 165 aaKnown RBP12.39□□□□□ -0.43
TSC2-221ENST00000568366 CDKN1BP46527 198 aa12.39□□□□□ -0.43
TSC2-221ENST00000568366 NIPSNAP3BQ9BS92 247 aa12.39□□□□□ -0.43
TSC2-221ENST00000568366 TRBV19A0A075B6N1 114 aa12.38□□□□□ -0.43
TSC2-221ENST00000568366 HIST1H1EP10412 219 aaKnown RBP12.38□□□□□ -0.43
TSC2-221ENST00000568366 TMEM256Q8N2U0 113 aa12.38□□□□□ -0.43
TSC2-221ENST00000568366 RPP25LQ8N5L8 163 aaKnown RBP12.38□□□□□ -0.43
TSC2-221ENST00000568366 SLC25A2Q9BXI2 301 aa12.38□□□□□ -0.43
TSC2-221ENST00000568366 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
TSC2-221ENST00000568366 TIMM9Q9Y5J7 89 aa12.38□□□□□ -0.43
TSC2-221ENST00000568366 ALMS1Q8TCU4 4167 aa12.38□□□□□ -0.43
TSC2-221ENST00000568366 PRM2P04554 102 aa12.37□□□□□ -0.43
TSC2-221ENST00000568366 MIR17HGQ75NE6 70 aa12.37□□□□□ -0.43
TSC2-221ENST00000568366 BLNKQ8WV28 456 aa12.37□□□□□ -0.43
TSC2-221ENST00000568366 LINC01587Q99440 93 aa12.37□□□□□ -0.43
TSC2-221ENST00000568366 MRPL32Q9BYC8 188 aaKnown RBP12.37□□□□□ -0.43
TSC2-221ENST00000568366 PARD6GQ9BYG4 376 aaPredicted RBP12.37□□□□□ -0.43
TSC2-221ENST00000568366 IFNA5P01569 189 aa12.36□□□□□ -0.43
TSC2-221ENST00000568366 TSPOP30536 169 aa12.36□□□□□ -0.43
TSC2-221ENST00000568366 PDE6HQ13956 83 aa12.36□□□□□ -0.43
TSC2-221ENST00000568366 SCGB1C1Q8TD33 95 aa12.36□□□□□ -0.43
TSC2-221ENST00000568366 MED28Q9H204 178 aa12.36□□□□□ -0.43
TSC2-221ENST00000568366 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
TSC2-221ENST00000568366 PLECQ15149 4684 aaKnown RBP12.36□□□□□ -0.43
TSC2-221ENST00000568366 HYDINQ4G0P3 5121 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 NPIPB6E9PJ23 425 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 M0R3E3 92 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 NDUFB4O95168 129 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 DAD1P61803 113 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 FFAR4Q5NUL3 377 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 MRPL53Q96EL3 112 aaKnown RBP12.35□□□□□ -0.43
TSC2-221ENST00000568366 FAM167A-AS1Q96KT0 104 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 AAMDCQ9H7C9 122 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 FUT9Q9Y231 359 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 PRELID1Q9Y255 219 aa12.35□□□□□ -0.43
TSC2-221ENST00000568366 HTN1P15515 57 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 HTN3P15516 51 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 AZU1P20160 251 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 TAS2R60P59551 318 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 KIR3DS1Q14943 382 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 OXA1LQ15070 435 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 FCN2Q15485 313 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 EXOC3-AS1Q8N2X6 119 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 C20orf144Q9BQM9 153 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 NDUFAF3Q9BU61 184 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 OR51M1Q9H341 326 aa12.34□□□□□ -0.43
TSC2-221ENST00000568366 J3KRW8 73 aa12.33□□□□□ -0.44
TSC2-221ENST00000568366 OR10J4P0C629 311 aa12.33□□□□□ -0.44
TSC2-221ENST00000568366 NBEAP1P0C6P0 100 aa12.33□□□□□ -0.44
TSC2-221ENST00000568366 LEPP41159 167 aa12.33□□□□□ -0.44
TSC2-221ENST00000568366 GFI1BQ5VTD9 330 aa12.33□□□□□ -0.44
TSC2-221ENST00000568366 ODF3Q96PU9 254 aa12.33□□□□□ -0.44
TSC2-221ENST00000568366 PAXXQ9BUH6 204 aa12.33□□□□□ -0.44
TSC2-221ENST00000568366 NACAE9PAV3 2078 aa12.33□□□□□ -0.44
TSC2-221ENST00000568366 LYRM9A8MSI8 78 aa12.32□□□□□ -0.44
TSC2-221ENST00000568366 H7BYZ3 331 aa12.32□□□□□ -0.44
TSC2-221ENST00000568366 OR7C2O60412 319 aa12.32□□□□□ -0.44
TSC2-221ENST00000568366 CT45A10P0DMU9 189 aa12.32□□□□□ -0.44
TSC2-221ENST00000568366 ICAM4Q14773 271 aa12.32□□□□□ -0.44
TSC2-221ENST00000568366 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
TSC2-221ENST00000568366 DNAH1Q9P2D7 4330 aa12.31□□□□□ -0.44
TSC2-221ENST00000568366 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
TSC2-221ENST00000568366 FAM122CQ6P4D5 195 aa12.31□□□□□ -0.44
TSC2-221ENST00000568366 RNF141Q8WVD5 230 aa12.31□□□□□ -0.44
TSC2-221ENST00000568366 FXYD5Q96DB9 178 aa12.31□□□□□ -0.44
TSC2-221ENST00000568366 WFDC1Q9HC57 220 aa12.31□□□□□ -0.44
TSC2-221ENST00000568366 DEFB130BP0DP73 79 aa12.3□□□□□ -0.44
TSC2-221ENST00000568366 DEFB130AP0DP74 79 aa12.3□□□□□ -0.44
TSC2-221ENST00000568366 ERCC8Q13216 396 aa12.3□□□□□ -0.44
TSC2-221ENST00000568366 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
TSC2-221ENST00000568366 PHYHIPLQ96FC7 376 aa12.3□□□□□ -0.44
TSC2-221ENST00000568366 FAM210BQ96KR6 192 aa12.3□□□□□ -0.44
TSC2-221ENST00000568366 TRAV12-3A0A0B4J271 114 aa12.29□□□□□ -0.44
TSC2-221ENST00000568366 TAS2R45P59539 299 aa12.29□□□□□ -0.44
TSC2-221ENST00000568366 UBE2L3P68036 154 aaKnown RBP12.29□□□□□ -0.44
TSC2-221ENST00000568366 KHDC3LQ587J8 217 aa12.29□□□□□ -0.44
TSC2-221ENST00000568366 ZNF493Q6ZR52 646 aa12.29□□□□□ -0.44
TSC2-221ENST00000568366 RNASE8Q8TDE3 154 aaKnown RBP12.29□□□□□ -0.44
TSC2-221ENST00000568366 IGKV2-40A0A087WW87 121 aaPredicted RBP12.28□□□□□ -0.44
TSC2-221ENST00000568366 IGKV2D-40P01614 121 aaPredicted RBP12.28□□□□□ -0.44
TSC2-221ENST00000568366 P0DMU3 169 aa12.28□□□□□ -0.44
TSC2-221ENST00000568366 FAM231AP0DMU4 169 aa12.28□□□□□ -0.44
TSC2-221ENST00000568366 FAM231CP0DMU5 169 aa12.28□□□□□ -0.44
TSC2-221ENST00000568366 ACOT6Q3I5F7 207 aaPredicted RBP12.28□□□□□ -0.44
TSC2-221ENST00000568366 C9orf47Q6ZRZ4 202 aa12.28□□□□□ -0.44
TSC2-221ENST00000568366 CCDC28AQ8IWP9 274 aa12.28□□□□□ -0.44
TSC2-221ENST00000568366 ZNF503Q96F45 646 aa12.28□□□□□ -0.44
TSC2-221ENST00000568366 LINC00477Q96M19 166 aa12.28□□□□□ -0.44
TSC2-221ENST00000568366 AGPAT4-IT1Q9H0P7 198 aa12.28□□□□□ -0.44
TSC2-221ENST00000568366 TIMM8BQ9Y5J9 83 aaPredicted RBP12.28□□□□□ -0.44
TSC2-221ENST00000568366 C7orf71A4D174 169 aa12.27□□□□□ -0.45
TSC2-221ENST00000568366 SLC25A5P05141 298 aaKnown RBP12.27□□□□□ -0.45
TSC2-221ENST00000568366 GIPP09681 153 aaPredicted RBP12.27□□□□□ -0.45
TSC2-221ENST00000568366 RGS21Q2M5E4 152 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms