RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 ZNF503Q96F45 646 aa19.08■□□□□ 0.64
NME3-209ENST00000566600 RARRES2Q99969 163 aa19.08■□□□□ 0.64
NME3-209ENST00000566600 ACTR3CQ9C0K3 210 aaPredicted RBP19.08■□□□□ 0.64
NME3-209ENST00000566600 ZNF705FA8MVS1 300 aaPredicted RBP19.07■□□□□ 0.64
NME3-209ENST00000566600 EIF5AP63241 154 aaKnown RBP19.07■□□□□ 0.64
NME3-209ENST00000566600 OR10J6PQ8NGY7 276 aa19.07■□□□□ 0.64
NME3-209ENST00000566600 XCL2Q9UBD3 114 aa19.07■□□□□ 0.64
NME3-209ENST00000566600 TMUB2Q71RG4 321 aa19.06■□□□□ 0.64
NME3-209ENST00000566600 LYPD1Q8N2G4 141 aa19.06■□□□□ 0.64
NME3-209ENST00000566600 OR11H2Q8NH07 326 aa19.06■□□□□ 0.64
NME3-209ENST00000566600 RAB24Q969Q5 203 aa19.06■□□□□ 0.64
NME3-209ENST00000566600 HYLS1Q96M11 299 aa19.06■□□□□ 0.64
NME3-209ENST00000566600 ZNF471Q9BX82 626 aaPredicted RBP19.06■□□□□ 0.64
NME3-209ENST00000566600 EDA2RQ9HAV5 297 aa19.06■□□□□ 0.64
NME3-209ENST00000566600 AMBPP02760 352 aa19.05■□□□□ 0.64
NME3-209ENST00000566600 ZNF705DP0CH99 300 aaPredicted RBP19.05■□□□□ 0.64
NME3-209ENST00000566600 ZNF705BP0CI00 300 aaPredicted RBP19.05■□□□□ 0.64
NME3-209ENST00000566600 STAG3L2P0CL84 134 aa19.05■□□□□ 0.64
NME3-209ENST00000566600 STAG3L3P0CL85 134 aa19.05■□□□□ 0.64
NME3-209ENST00000566600 AKR1C8PQ5T2L2 129 aa19.05■□□□□ 0.64
NME3-209ENST00000566600 AMTNQ6UX39 209 aa19.05■□□□□ 0.64
NME3-209ENST00000566600 CSNK1G2-AS1Q8NCQ2 148 aa19.05■□□□□ 0.64
NME3-209ENST00000566600 SLC35B3Q9H1N7 401 aa19.05■□□□□ 0.64
NME3-209ENST00000566600 PPP1R14DQ9NXH3 145 aa19.05■□□□□ 0.64
NME3-209ENST00000566600 ICAM4Q14773 271 aa19.04■□□□□ 0.64
NME3-209ENST00000566600 FXYD7P58549 80 aa19.03■□□□□ 0.64
NME3-209ENST00000566600 EXOC3-AS1Q8N2X6 119 aa19.03■□□□□ 0.64
NME3-209ENST00000566600 PHYHIPLQ96FC7 376 aa19.03■□□□□ 0.64
NME3-209ENST00000566600 PRAC2D3DTV9 90 aa19.02■□□□□ 0.64
NME3-209ENST00000566600 HMGB3O15347 200 aaKnown RBP19.02■□□□□ 0.64
NME3-209ENST00000566600 EIF3GO75821 320 aaKnown RBP eCLIP19.02■□□□□ 0.64
NME3-209ENST00000566600 ARL14EPLP0DKL9 152 aa19.02■□□□□ 0.64
NME3-209ENST00000566600 RANP62826 216 aaKnown RBP19.02■□□□□ 0.64
NME3-209ENST00000566600 BOLA2-SMG1P6H3BVE0 249 aa19.01■□□□□ 0.63
NME3-209ENST00000566600 M0R3E3 92 aa19.01■□□□□ 0.63
NME3-209ENST00000566600 SEC11BP0C7V7 166 aa19.01■□□□□ 0.63
NME3-209ENST00000566600 CTXND1A0A1B0GTU2 59 aa19■□□□□ 0.63
NME3-209ENST00000566600 A0A1B0GVG6 124 aa19■□□□□ 0.63
NME3-209ENST00000566600 ZNF705EA8MWA4 302 aaPredicted RBP19■□□□□ 0.63
NME3-209ENST00000566600 CXorf1O96002 111 aa19■□□□□ 0.63
NME3-209ENST00000566600 TPT1P13693 172 aaKnown RBP19■□□□□ 0.63
NME3-209ENST00000566600 CSN1S1P47710 185 aa19■□□□□ 0.63
NME3-209ENST00000566600 LGALSLQ3ZCW2 172 aaPredicted RBP19■□□□□ 0.63
NME3-209ENST00000566600 Q9H3A6 140 aa19■□□□□ 0.63
NME3-209ENST00000566600 NPIPB6E9PJ23 425 aa18.99■□□□□ 0.63
NME3-209ENST00000566600 FAM74A1Q5RGS3 127 aa18.99■□□□□ 0.63
NME3-209ENST00000566600 BAP18Q8IXM2 172 aa18.99■□□□□ 0.63
NME3-209ENST00000566600 IGF2BP2-AS1Q96M15 143 aa18.99■□□□□ 0.63
NME3-209ENST00000566600 TMEM167BQ9NRX6 74 aa18.99■□□□□ 0.63
NME3-209ENST00000566600 GOLT1BQ9Y3E0 138 aa18.99■□□□□ 0.63
NME3-209ENST00000566600 PRB4P10163 310 aaPredicted RBP18.98■□□□□ 0.63
NME3-209ENST00000566600 MIFP14174 115 aa18.98■□□□□ 0.63
NME3-209ENST00000566600 GCHFRP30047 84 aa18.98■□□□□ 0.63
NME3-209ENST00000566600 TSPOP30536 169 aa18.98■□□□□ 0.63
NME3-209ENST00000566600 SPINK13Q1W4C9 94 aa18.98■□□□□ 0.63
NME3-209ENST00000566600 OTORQ9NRC9 128 aa18.98■□□□□ 0.63
NME3-209ENST00000566600 A0A0J9YWU9 116 aa18.97■□□□□ 0.63
NME3-209ENST00000566600 UMAD1C9J7I0 102 aa18.97■□□□□ 0.63
NME3-209ENST00000566600 M0R2Z0 102 aa18.97■□□□□ 0.63
NME3-209ENST00000566600 INSP01308 110 aa18.97■□□□□ 0.63
NME3-209ENST00000566600 ZFP69Q49AA0 526 aa18.97■□□□□ 0.63
NME3-209ENST00000566600 ZNF705AQ6ZN79 300 aaPredicted RBP18.97■□□□□ 0.63
NME3-209ENST00000566600 IL17DQ8TAD2 202 aa18.97■□□□□ 0.63
NME3-209ENST00000566600 STOML3Q8TAV4 291 aa18.97■□□□□ 0.63
NME3-209ENST00000566600 RXFP4Q8TDU9 374 aa18.97■□□□□ 0.63
NME3-209ENST00000566600 ODF3Q96PU9 254 aa18.97■□□□□ 0.63
NME3-209ENST00000566600 C11orf68Q9H3H3 251 aaKnown RBP18.97■□□□□ 0.63
NME3-209ENST00000566600 MUC7Q8TAX7 377 aa18.96■□□□□ 0.63
NME3-209ENST00000566600 SUN5Q8TC36 379 aa18.96■□□□□ 0.63
NME3-209ENST00000566600 LINC00477Q96M19 166 aa18.96■□□□□ 0.63
NME3-209ENST00000566600 X6R8D5 127 aa18.96■□□□□ 0.63
NME3-209ENST00000566600 CDKN1BP46527 198 aa18.95■□□□□ 0.62
NME3-209ENST00000566600 ZNF726P1Q15940 193 aa18.95■□□□□ 0.62
NME3-209ENST00000566600 SSX7Q7RTT5 188 aa18.95■□□□□ 0.62
NME3-209ENST00000566600 NEU1Q99519 415 aa18.95■□□□□ 0.62
NME3-209ENST00000566600 SMIM9A6NGZ8 99 aa18.94■□□□□ 0.62
NME3-209ENST00000566600 EIF5AL1Q6IS14 154 aaKnown RBP18.94■□□□□ 0.62
NME3-209ENST00000566600 C9orf47Q6ZRZ4 202 aa18.94■□□□□ 0.62
NME3-209ENST00000566600 ARL6IP6Q8N6S5 226 aa18.94■□□□□ 0.62
NME3-209ENST00000566600 CMTM2Q8TAZ6 248 aa18.94■□□□□ 0.62
NME3-209ENST00000566600 PGPA6NDG6 321 aa18.93■□□□□ 0.62
NME3-209ENST00000566600 CRXO43186 299 aaPredicted RBP18.93■□□□□ 0.62
NME3-209ENST00000566600 CT45A10P0DMU9 189 aa18.93■□□□□ 0.62
NME3-209ENST00000566600 LEPP41159 167 aa18.93■□□□□ 0.62
NME3-209ENST00000566600 CD300CQ08708 224 aa18.93■□□□□ 0.62
NME3-209ENST00000566600 TMEM78Q5T7P6 136 aa18.93■□□□□ 0.62
NME3-209ENST00000566600 IQCF2Q8IXL9 164 aa18.93■□□□□ 0.62
NME3-209ENST00000566600 Q8NAQ8 132 aa18.93■□□□□ 0.62
NME3-209ENST00000566600 TMEM208Q9BTX3 173 aa18.93■□□□□ 0.62
NME3-209ENST00000566600 IGHV3OR16-12A0A075B7B8 117 aa18.92■□□□□ 0.62
NME3-209ENST00000566600 RBAKDNA6NC62 111 aa18.92■□□□□ 0.62
NME3-209ENST00000566600 C3orf84H3BNL1 204 aa18.92■□□□□ 0.62
NME3-209ENST00000566600 SLC25A5P05141 298 aaKnown RBP18.92■□□□□ 0.62
NME3-209ENST00000566600 DPPA3Q6W0C5 159 aa18.92■□□□□ 0.62
NME3-209ENST00000566600 C1orf158Q8N1D5 194 aa18.92■□□□□ 0.62
NME3-209ENST00000566600 IGKV2-40A0A087WW87 121 aaPredicted RBP18.91■□□□□ 0.62
NME3-209ENST00000566600 IGHV4-28A0A0C4DH34 117 aa18.91■□□□□ 0.62
NME3-209ENST00000566600 MAP1LC3B2A6NCE7 125 aa18.91■□□□□ 0.62
NME3-209ENST00000566600 IGKV2D-40P01614 121 aaPredicted RBP18.91■□□□□ 0.62
NME3-209ENST00000566600 ERCC8Q13216 396 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 264.8 ms