RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 GFI1BQ5VTD9 330 aa11.69□□□□□ -0.54
CCNF-203ENST00000564236 OR1L4Q8NGR5 311 aa11.69□□□□□ -0.54
CCNF-203ENST00000564236 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
CCNF-203ENST00000564236 ZNF503Q96F45 646 aa11.69□□□□□ -0.54
CCNF-203ENST00000564236 PFDN5Q99471 154 aa11.69□□□□□ -0.54
CCNF-203ENST00000564236 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
CCNF-203ENST00000564236 CCDC32Q9BV29 185 aa11.69□□□□□ -0.54
CCNF-203ENST00000564236 LYRM2Q9NU23 88 aaPredicted RBP11.69□□□□□ -0.54
CCNF-203ENST00000564236 NDUFA13Q9P0J0 144 aa11.69□□□□□ -0.54
CCNF-203ENST00000564236 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
CCNF-203ENST00000564236 S100A11P31949 105 aa11.68□□□□□ -0.54
CCNF-203ENST00000564236 CAV2P51636 162 aa11.68□□□□□ -0.54
CCNF-203ENST00000564236 MIC13Q5XKP0 118 aa11.68□□□□□ -0.54
CCNF-203ENST00000564236 C12orf45Q8N5I9 185 aaPredicted RBP11.68□□□□□ -0.54
CCNF-203ENST00000564236 RNF141Q8WVD5 230 aa11.68□□□□□ -0.54
CCNF-203ENST00000564236 NOP10Q9NPE3 64 aaKnown RBP11.68□□□□□ -0.54
CCNF-203ENST00000564236 NUDT15Q9NV35 164 aa11.68□□□□□ -0.54
CCNF-203ENST00000564236 LSM5Q9Y4Y9 91 aaKnown RBP11.68□□□□□ -0.54
CCNF-203ENST00000564236 FAM24AA6NFZ4 105 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 CST7O76096 145 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 HTN1P15515 57 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 PVALBP20472 110 aaPredicted RBP11.67□□□□□ -0.54
CCNF-203ENST00000564236 SULT1A1P50225 295 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 BCAP31P51572 246 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 CCL18P55774 89 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 LINC00299Q6ZSB3 139 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 SEC22CQ9BRL7 303 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 SLC39A9Q9NUM3 307 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 TMEM14CQ9P0S9 112 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 LINC00588Q9Y4M8 146 aa11.67□□□□□ -0.54
CCNF-203ENST00000564236 TRAV6A0A075B6T7 132 aa11.66□□□□□ -0.54
CCNF-203ENST00000564236 C5orf51A6NDU8 294 aa11.66□□□□□ -0.54
CCNF-203ENST00000564236 H3BNG1 76 aa11.66□□□□□ -0.54
CCNF-203ENST00000564236 NUDT3O95989 172 aa11.66□□□□□ -0.54
CCNF-203ENST00000564236 SNRPCP09234 159 aaKnown RBP11.66□□□□□ -0.54
CCNF-203ENST00000564236 CT45A10P0DMU9 189 aa11.66□□□□□ -0.54
CCNF-203ENST00000564236 PRB4P10163 310 aaPredicted RBP11.66□□□□□ -0.54
CCNF-203ENST00000564236 TMEM252Q8N6L7 170 aa11.66□□□□□ -0.54
CCNF-203ENST00000564236 ZNF586Q9NXT0 402 aa11.66□□□□□ -0.54
CCNF-203ENST00000564236 TRBV19A0A075B6N1 114 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 TRAV5A0A0B4J249 113 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 IGSF23A1L1A6 192 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 FAM25EA8MYX2 175 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 H3BTX0 84 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 LEPP41159 167 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 DAZ2Q13117 558 aaKnown RBP11.65□□□□□ -0.54
CCNF-203ENST00000564236 PDE6HQ13956 83 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 ATP6V1FQ16864 119 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 CCDC28AQ8IWP9 274 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 FAM19A4Q96LR4 140 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 C18orf15Q96N68 181 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 PYGO2Q9BRQ0 406 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 LINC00467Q9BRT7 94 aa11.65□□□□□ -0.54
CCNF-203ENST00000564236 PARD6GQ9BYG4 376 aaPredicted RBP11.65□□□□□ -0.54
CCNF-203ENST00000564236 RYR1P21817 5038 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 MPDU1O75352 247 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 H2AFB2P0C5Z0 115 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 M6PRP20645 277 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 HBG1P69891 147 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 HBG2P69892 147 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 RAB32Q13637 225 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 STX12Q86Y82 276 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 RXFP4Q8TDU9 374 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 UPK3BQ9BT76 320 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 PRELID1Q9Y255 219 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 LRP1BQ9NZR2 4599 aa11.64□□□□□ -0.55
CCNF-203ENST00000564236 HSPG2P98160 4391 aa11.63□□□□□ -0.55
CCNF-203ENST00000564236 UBE2L5PA0A1B0GUS4 154 aa11.63□□□□□ -0.55
CCNF-203ENST00000564236 KLLNB2CW77 178 aa11.63□□□□□ -0.55
CCNF-203ENST00000564236 NDUFB4O95168 129 aa11.63□□□□□ -0.55
CCNF-203ENST00000564236 SLC25A5P05141 298 aaKnown RBP11.63□□□□□ -0.55
CCNF-203ENST00000564236 HIST1H1EP10412 219 aaKnown RBP11.63□□□□□ -0.55
CCNF-203ENST00000564236 SSX7Q7RTT5 188 aa11.63□□□□□ -0.55
CCNF-203ENST00000564236 ZNF575Q86XF7 245 aa11.63□□□□□ -0.55
CCNF-203ENST00000564236 ZNF324O75467 553 aaPredicted RBP11.62□□□□□ -0.55
CCNF-203ENST00000564236 RLN2P04090 185 aa11.62□□□□□ -0.55
CCNF-203ENST00000564236 HOXA5P20719 270 aa11.62□□□□□ -0.55
CCNF-203ENST00000564236 TNP2Q05952 138 aa11.62□□□□□ -0.55
CCNF-203ENST00000564236 BAXQ07812 192 aa11.62□□□□□ -0.55
CCNF-203ENST00000564236 GNPNAT1Q96EK6 184 aaPredicted RBP11.62□□□□□ -0.55
CCNF-203ENST00000564236 LINC00477Q96M19 166 aa11.62□□□□□ -0.55
CCNF-203ENST00000564236 TRAV26-1A0A087WT03 109 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 TRAV12-3A0A0B4J271 114 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 SNURFLB1AK76 121 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 M0R3E3 92 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 NMBP08949 121 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 CRISP2P16562 243 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 BTF3P20290 206 aaKnown RBP11.61□□□□□ -0.55
CCNF-203ENST00000564236 S100A10P60903 97 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 CLINT1Q14677 625 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 C11orf72Q8NBR9 251 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 ZNF680Q8NEM1 530 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 NPCDR1Q9BY65 106 aa11.61□□□□□ -0.55
CCNF-203ENST00000564236 FAM240BA0A1B0GVZ2 78 aa11.6□□□□□ -0.55
CCNF-203ENST00000564236 C7orf71A4D174 169 aa11.6□□□□□ -0.55
CCNF-203ENST00000564236 FGF7P21781 194 aa11.6□□□□□ -0.55
CCNF-203ENST00000564236 ASAH1Q13510 395 aa11.6□□□□□ -0.55
CCNF-203ENST00000564236 ANXA2RQ3ZCQ2 193 aa11.6□□□□□ -0.55
CCNF-203ENST00000564236 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms