RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 LEPP41159 167 aa9.01□□□□□ -0.97
SF3B3-202ENST00000562722 ESRGQ1W209 222 aa9.01□□□□□ -0.97
SF3B3-202ENST00000562722 Q8N1X5 172 aa9.01□□□□□ -0.97
SF3B3-202ENST00000562722 KRTAP1-5Q9BYS1 174 aa9.01□□□□□ -0.97
SF3B3-202ENST00000562722 Q9H3A6 140 aa9.01□□□□□ -0.97
SF3B3-202ENST00000562722 PXMP4Q9Y6I8 212 aa9.01□□□□□ -0.97
SF3B3-202ENST00000562722 L7N2F9 121 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 TAS2R30P59541 319 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 VAMP2P63027 116 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 RAB31Q13636 194 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 OPCMLQ14982 345 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 LINC00612Q8N6U2 182 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 ZBTB8BQ8NAP8 495 aaPredicted RBP9□□□□□ -0.97
SF3B3-202ENST00000562722 MGST2Q99735 147 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 GGACTQ9BVM4 153 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 TMPRSS5Q9H3S3 457 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 ZNF586Q9NXT0 402 aa9□□□□□ -0.97
SF3B3-202ENST00000562722 RCL1Q9Y2P8 373 aaKnown RBP9□□□□□ -0.97
SF3B3-202ENST00000562722 MRPS16Q9Y3D3 137 aaKnown RBP9□□□□□ -0.97
SF3B3-202ENST00000562722 TRGV2A0A075B6R0 118 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 A0A1W2PPQ1 181 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 CENPXA8MT69 81 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 IGLC2P0DOY2 106 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 CAMLGP49069 296 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 BCAP31P51572 246 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 ARL16Q0P5N6 197 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 MORN5Q5VZ52 161 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 Q6ZRG5 221 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 Q6ZTI0 123 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 TMEM37Q8WXS4 190 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 UPK3BQ9BT76 320 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 SRRQ9GZT4 340 aa8.99□□□□□ -0.97
SF3B3-202ENST00000562722 C7orf66A4D0T2 115 aa8.98□□□□□ -0.97
SF3B3-202ENST00000562722 H3BNG1 76 aa8.98□□□□□ -0.97
SF3B3-202ENST00000562722 H3BQ15 152 aa8.98□□□□□ -0.97
SF3B3-202ENST00000562722 CT45A10P0DMU9 189 aa8.98□□□□□ -0.97
SF3B3-202ENST00000562722 KRTAP10-2P60368 255 aa8.98□□□□□ -0.97
SF3B3-202ENST00000562722 ZNF846Q147U1 533 aa8.98□□□□□ -0.97
SF3B3-202ENST00000562722 BAK1Q16611 211 aa8.98□□□□□ -0.97
SF3B3-202ENST00000562722 PYGO2Q9BRQ0 406 aa8.98□□□□□ -0.97
SF3B3-202ENST00000562722 DNAJC4Q9NNZ3 241 aa8.98□□□□□ -0.97
SF3B3-202ENST00000562722 LSM5Q9Y4Y9 91 aaKnown RBP8.98□□□□□ -0.97
SF3B3-202ENST00000562722 TRGV1A0A0A0MS02 117 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 TRAV5A0A0B4J249 113 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 FAM25EA8MYX2 175 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 NPIPB6E9PJ23 425 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 MBPP02686 304 aaPredicted RBP8.97□□□□□ -0.97
SF3B3-202ENST00000562722 BTF3P20290 206 aaKnown RBP8.97□□□□□ -0.97
SF3B3-202ENST00000562722 CAV2P51636 162 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 GUK1Q16774 197 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 MIC13Q5XKP0 118 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 NRARPQ7Z6K4 114 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 ZNF680Q8NEM1 530 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 OR1L4Q8NGR5 311 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 ZNF431Q8TF32 576 aaPredicted RBP8.97□□□□□ -0.97
SF3B3-202ENST00000562722 ODF3Q96PU9 254 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 GSN-AS1Q9NRJ2 163 aa8.97□□□□□ -0.97
SF3B3-202ENST00000562722 CCSO14618 274 aa8.96□□□□□ -0.98
SF3B3-202ENST00000562722 CST7O76096 145 aa8.96□□□□□ -0.98
SF3B3-202ENST00000562722 LINC00315P59091 139 aa8.96□□□□□ -0.98
SF3B3-202ENST00000562722 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.98
SF3B3-202ENST00000562722 MITD1Q8WV92 249 aa8.96□□□□□ -0.98
SF3B3-202ENST00000562722 SAT2Q96F10 170 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-202ENST00000562722 C7orf71A4D174 169 aa8.95□□□□□ -0.98
SF3B3-202ENST00000562722 SLC25A5P05141 298 aaKnown RBP8.95□□□□□ -0.98
SF3B3-202ENST00000562722 ERCC8Q13216 396 aa8.95□□□□□ -0.98
SF3B3-202ENST00000562722 PFDN5Q99471 154 aa8.95□□□□□ -0.98
SF3B3-202ENST00000562722 UQCC1Q9NVA1 299 aa8.95□□□□□ -0.98
SF3B3-202ENST00000562722 FUT9Q9Y231 359 aa8.95□□□□□ -0.98
SF3B3-202ENST00000562722 A0A096LPF7 62 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 UBE2L5PA0A1B0GUS4 154 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 C5orf51A6NDU8 294 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 M0R3E3 92 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 EREGO14944 169 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 SIVA1O15304 175 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 RNASE4P34096 147 aaKnown RBP8.94□□□□□ -0.98
SF3B3-202ENST00000562722 BTCP35070 178 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 BAXQ07812 192 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 BTN1A1Q13410 526 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 C12orf45Q8N5I9 185 aaPredicted RBP8.94□□□□□ -0.98
SF3B3-202ENST00000562722 EIF4E3Q8N5X7 224 aaKnown RBP8.94□□□□□ -0.98
SF3B3-202ENST00000562722 VSIG2Q96IQ7 327 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 C20orf85Q9H1P6 137 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 PTTG2Q9NZH5 202 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 TIMM9Q9Y5J7 89 aa8.94□□□□□ -0.98
SF3B3-202ENST00000562722 TRBV19A0A075B6N1 114 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 FAM24AA6NFZ4 105 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 PAX4O43316 350 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 ZNF253O75346 499 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 IGHV3-53P01767 116 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 PVALBP20472 110 aaPredicted RBP8.93□□□□□ -0.98
SF3B3-202ENST00000562722 S100A10P60903 97 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 C11orf72Q8NBR9 251 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 BLNKQ8WV28 456 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 MRPL53Q96EL3 112 aaKnown RBP8.93□□□□□ -0.98
SF3B3-202ENST00000562722 SLC39A9Q9NUM3 307 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 WDR83OSQ9Y284 106 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 ICOSQ9Y6W8 199 aa8.93□□□□□ -0.98
SF3B3-202ENST00000562722 EPM2AB3EWF7 344 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 RGS13O14921 159 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms