RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 TICRRQ7Z2Z1 1910 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 TRPM2O94759 1503 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 EHBP1L1Q8N3D4 1523 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 CHD5Q8TDI0 1954 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 OTOFQ9HC10 1997 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 GLI3P10071 1580 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 NRKQ7Z2Y5 1582 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 DOCK6Q96HP0 2047 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 MAST1Q9Y2H9 1570 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 PREX2Q70Z35 1606 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 CEP350Q5VT06 3117 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 SPHKAPQ2M3C7 1700 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 UBR1Q8IWV7 1749 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 IGKV2-28A0A075B6P5 120 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 IGHV3OR16-8A0A075B7F1 116 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 TRAV3A0A0B4J244 114 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 IGHV1-18A0A0C4DH31 117 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 FAM236AA0A1B0GUQ0 79 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 FAM236BA0A1B0GV22 79 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 PVALEFA0A1B0GWK0 134 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 hDV103S1A0JD37 113 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 IFITM5A6NNB3 132 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 ZNF727A8MUV8 499 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 SNCGO76070 127 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 IGKV2D-28P01615 120 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 CTSDP07339 412 aaPredicted RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 BAALC-AS2P0C853 105 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 CCL5P13501 91 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 ZNF14P17017 642 aaPredicted RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 ZNF22P17026 224 aaPredicted RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 DSCR10P59022 87 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 CDK6Q00534 326 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 ZNF90Q03938 601 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 LY6EQ16553 131 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 Q5XG85 94 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 TEX261Q6UWH6 196 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 C2orf82Q6UX34 121 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 TMEM91Q6ZNR0 172 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 C3orf62Q6ZUJ4 267 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 TEN1Q86WV5 123 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 RPS19BP1Q86WX3 136 aaKnown RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 OR8B3Q8NGG8 313 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 CLEC2BQ92478 149 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 MUCL1Q96DR8 90 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 RETNLBQ9BQ08 111 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 METTL1Q9UBP6 276 aaKnown RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 ZFP30Q9Y2G7 519 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 NOP16Q9Y3C1 178 aaKnown RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 AP4S1Q9Y587 144 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 FAM215AQ9Y5M1 114 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 HSPE1-MOB4S4R3N1 261 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 XIRP1Q702N8 1843 aaKnown RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 RALGAPA2Q2PPJ7 1873 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 KDM6AO15550 1401 aaPredicted RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 RRBP1Q9P2E9 1410 aaKnown RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 MBD5Q9P267 1494 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 NUP214P35658 2090 aaPredicted RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 DSCAML1Q8TD84 2053 aa1.3□□□□□ -2.2
RTF1-207ENST00000561076 INO80Q9ULG1 1556 aaPredicted RBP1.3□□□□□ -2.2
RTF1-207ENST00000561076 RGPD1P0DJD0 1748 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 TAF1LQ8IZX4 1826 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 MYH10P35580 1976 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 ANKRD12Q6UB98 2062 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 DOCK8Q8NF50 2099 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 IGLV2-18A0A075B6J9 118 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 TRBV20-1A0A075B6N2 111 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 TRAV30A0A087WSZ9 112 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 IGHV1-24A0A0C4DH33 117 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 LOC107984156A0A0G2JMH3 177 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 C3orf85A0A1B0GTC6 90 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 A0A1B0GU33 70 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 A6NIN4 97 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 C16orf90A8MZG2 172 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 FNDC10F2Z333 226 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 G3V3Q6 166 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 K7EM74 188 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 APOC4-APOC2K7ER74 178 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 M0R129 80 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 HYPMO75409 117 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 CPSF4O95639 269 aaKnown RBP1.29□□□□□ -2.2
RTF1-207ENST00000561076 APOC2P02655 101 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 CD2P06729 351 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 ASAH2BP0C7U1 165 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 PIPP12273 146 aaPredicted RBP1.29□□□□□ -2.2
RTF1-207ENST00000561076 DEFA4P12838 97 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 RPL26P61254 145 aaKnown RBP1.29□□□□□ -2.2
RTF1-207ENST00000561076 DIAPH2-AS1Q14236 149 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 ZNF846Q147U1 533 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 SS18Q15532 418 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 DEFB134Q4QY38 66 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 COL5A1-AS1Q5SY13 56 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 RPL7L1Q6DKI1 246 aaKnown RBP1.29□□□□□ -2.2
RTF1-207ENST00000561076 MRPL54Q6P161 138 aaKnown RBP1.29□□□□□ -2.2
RTF1-207ENST00000561076 LYPD6Q86Y78 171 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 ARL17AQ8IVW1 177 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 OR5AS1Q8N127 324 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 Q8NAQ8 132 aa1.29□□□□□ -2.2
RTF1-207ENST00000561076 POP5Q969H6 163 aaKnown RBP1.29□□□□□ -2.2
RTF1-207ENST00000561076 DIRC1Q969H9 104 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms