RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ZFAND3Q9H8U3 227 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 S4R3C0 116 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 DCHS2Q6V1P9 2916 aa6.3□□□□□ -1.4
SMAD3-212ENST00000559937 ABCA12Q86UK0 2595 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 IGHV1-69DA0A0B4J2H0 117 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 RBAKDNA6NC62 111 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 OR2T8A6NH00 312 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 SH2D7A6NKC9 451 aaPredicted RBP6.29□□□□□ -1.4
SMAD3-212ENST00000559937 FAM223BA6NKX1 122 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 ZNF785A8K8V0 405 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 H3BUA1 57 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 CHEK1O14757 476 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 HSBP1O75506 76 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 IGHV1-69P01742 117 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 APOHP02749 345 aaPredicted RBP6.29□□□□□ -1.4
SMAD3-212ENST00000559937 RHOGP84095 191 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 ECSCRQ19T08 205 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 C15orf32Q32M92 178 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 C19orf54Q5BKX5 351 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 NIT1Q86X76 327 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 FAM223AQ8IWN6 122 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 PIP4P2Q8N4L2 257 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 BORCS7Q96B45 105 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 MRPL53Q96EL3 112 aaKnown RBP6.29□□□□□ -1.4
SMAD3-212ENST00000559937 CCL19Q99731 98 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 C2orf88Q9BSF0 95 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 VAMP8Q9BV40 100 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 CELSR2Q9HCU4 2923 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 CLEC5AQ9NY25 188 aa6.29□□□□□ -1.4
SMAD3-212ENST00000559937 LOC102724200A0A096LPH7 203 aaPredicted RBP6.28□□□□□ -1.4
SMAD3-212ENST00000559937 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.28□□□□□ -1.4
SMAD3-212ENST00000559937 M0R3E3 92 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 C3orf79P0CE67 100 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 GPR183P32249 361 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 BMI1P35226 326 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 DSCR9P59020 149 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 RELQ04864 619 aaPredicted RBP6.28□□□□□ -1.4
SMAD3-212ENST00000559937 PMCHL1Q16048 86 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 CLEC2AQ6UVW9 174 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 ZNF493Q6ZR52 646 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 Q8N976 141 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 PSMG3-AS1Q96PY0 264 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 PRR25Q96S07 402 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 SPOCK3Q9BQ16 436 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 SSBP4Q9BWG4 385 aaPredicted RBP6.28□□□□□ -1.4
SMAD3-212ENST00000559937 SMAD5-AS1Q9Y6J3 95 aa6.28□□□□□ -1.4
SMAD3-212ENST00000559937 TRAV41A0A0B4J266 112 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 C20orf202A1L168 122 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 TMEM189A5PLL7 270 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 M0QZK8 103 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 BUB3O43684 328 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 IGHV3-23P01764 117 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 OR5AL1P0C617 328 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 CRIP1P50238 77 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 KRTDAPP60985 99 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 ATP5G2Q06055 141 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 BCL6BQ8N143 479 aaPredicted RBP6.27□□□□□ -1.41
SMAD3-212ENST00000559937 CCDC140Q96MF4 163 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 HIF1ANQ9NWT6 349 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 ZNF580Q9UK33 172 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 U3KQE9 123 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 NBPF19A0A087WUL8 3843 aa6.27□□□□□ -1.41
SMAD3-212ENST00000559937 IGHV4-61A0A0C4DH41 118 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 M0R2Z0 102 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 SH2D1AO60880 128 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 IGHG4P01861 327 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 IGF1P05019 195 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 CLEC3BP05452 202 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 ARMS2P0C7Q2 107 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 NTF3P20783 257 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 GATA3P23771 443 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 CTRLP40313 264 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 RNASEKQ6P5S7 137 aaKnown RBP6.26□□□□□ -1.41
SMAD3-212ENST00000559937 PIFOQ8TCI5 191 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 C8orf49Q96NF6 230 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 METTL26Q96S19 204 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 MIEN1Q9BRT3 115 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 PPP1R14DQ9NXH3 145 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
SMAD3-212ENST00000559937 TACC2O95359 2948 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 IGKV2-40A0A087WW87 121 aaPredicted RBP6.25□□□□□ -1.41
SMAD3-212ENST00000559937 TRAV40A0A0B4J280 105 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 CLPSL1A2RUU4 121 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 A6NDX4 124 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 FAM181BA6NEQ2 426 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 G3V318 75 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 M0R143 59 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 IGKV2D-40P01614 121 aaPredicted RBP6.25□□□□□ -1.41
SMAD3-212ENST00000559937 IGHG2P01859 326 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 MSMBP08118 114 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 CD33P20138 364 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 BTF3P20290 206 aaKnown RBP6.25□□□□□ -1.41
SMAD3-212ENST00000559937 ATP5J2P56134 94 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 LCN12Q6JVE5 192 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 CLEC19AQ6UXS0 136 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 KLHDC1Q8N7A1 406 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 URB1-AS1Q96HZ7 61 aa6.25□□□□□ -1.41
SMAD3-212ENST00000559937 USMG5Q96IX5 58 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms