RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-210ENST00000559092 SSNA1O43805 119 aa12.53□□□□□ -0.4
SMAD3-210ENST00000559092 TAS2R60P59551 318 aa12.53□□□□□ -0.4
SMAD3-210ENST00000559092 PPP1R1CQ8WVI7 109 aa12.53□□□□□ -0.4
SMAD3-210ENST00000559092 LINC01587Q99440 93 aa12.53□□□□□ -0.4
SMAD3-210ENST00000559092 C20orf144Q9BQM9 153 aa12.53□□□□□ -0.4
SMAD3-210ENST00000559092 KCNIP2Q9NS61 270 aa12.53□□□□□ -0.4
SMAD3-210ENST00000559092 ZNF586Q9NXT0 402 aa12.53□□□□□ -0.4
SMAD3-210ENST00000559092 TRBV19A0A075B6N1 114 aa12.52□□□□□ -0.41
SMAD3-210ENST00000559092 LYRM9A8MSI8 78 aa12.52□□□□□ -0.41
SMAD3-210ENST00000559092 H3BTX0 84 aa12.52□□□□□ -0.41
SMAD3-210ENST00000559092 PET100P0DJ07 73 aa12.52□□□□□ -0.41
SMAD3-210ENST00000559092 P0DMU3 169 aa12.52□□□□□ -0.41
SMAD3-210ENST00000559092 FAM231AP0DMU4 169 aa12.52□□□□□ -0.41
SMAD3-210ENST00000559092 FAM231CP0DMU5 169 aa12.52□□□□□ -0.41
SMAD3-210ENST00000559092 HIST1H1EP10412 219 aaKnown RBP12.52□□□□□ -0.41
SMAD3-210ENST00000559092 PDE6HQ13956 83 aa12.52□□□□□ -0.41
SMAD3-210ENST00000559092 THAP6Q8TBB0 222 aa12.52□□□□□ -0.41
SMAD3-210ENST00000559092 MRPL53Q96EL3 112 aaKnown RBP12.52□□□□□ -0.41
SMAD3-210ENST00000559092 PRAC2D3DTV9 90 aa12.51□□□□□ -0.41
SMAD3-210ENST00000559092 DAD1P61803 113 aa12.51□□□□□ -0.41
SMAD3-210ENST00000559092 ODF3Q96PU9 254 aa12.51□□□□□ -0.41
SMAD3-210ENST00000559092 PLA2G2EQ9NZK7 142 aa12.51□□□□□ -0.41
SMAD3-210ENST00000559092 PRELID1Q9Y255 219 aa12.51□□□□□ -0.41
SMAD3-210ENST00000559092 MPC2O95563 127 aa12.5□□□□□ -0.41
SMAD3-210ENST00000559092 CLINT1Q14677 625 aa12.5□□□□□ -0.41
SMAD3-210ENST00000559092 ZNF493Q6ZR52 646 aa12.5□□□□□ -0.41
SMAD3-210ENST00000559092 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
SMAD3-210ENST00000559092 DNAH6Q9C0G6 4158 aa12.5□□□□□ -0.41
SMAD3-210ENST00000559092 C17orf112F2Z3M2 114 aa12.49□□□□□ -0.41
SMAD3-210ENST00000559092 H7BYZ3 331 aa12.49□□□□□ -0.41
SMAD3-210ENST00000559092 PRM2P04554 102 aa12.49□□□□□ -0.41
SMAD3-210ENST00000559092 AZU1P20160 251 aa12.49□□□□□ -0.41
SMAD3-210ENST00000559092 GCSAMLQ5JQS6 135 aa12.49□□□□□ -0.41
SMAD3-210ENST00000559092 TIMM9Q9Y5J7 89 aa12.49□□□□□ -0.41
SMAD3-210ENST00000559092 FRAS1Q86XX4 4008 aa12.49□□□□□ -0.41
SMAD3-210ENST00000559092 PLAC8L1A1L4L8 177 aa12.48□□□□□ -0.41
SMAD3-210ENST00000559092 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
SMAD3-210ENST00000559092 NDUFB4O95168 129 aa12.48□□□□□ -0.41
SMAD3-210ENST00000559092 PRB4P10163 310 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-210ENST00000559092 POM121L12Q8N7R1 296 aa12.48□□□□□ -0.41
SMAD3-210ENST00000559092 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
SMAD3-210ENST00000559092 ATP5SQ99766 215 aa12.48□□□□□ -0.41
SMAD3-210ENST00000559092 MRPL32Q9BYC8 188 aaKnown RBP12.48□□□□□ -0.41
SMAD3-210ENST00000559092 CT45A10P0DMU9 189 aa12.47□□□□□ -0.41
SMAD3-210ENST00000559092 LEPP41159 167 aa12.47□□□□□ -0.41
SMAD3-210ENST00000559092 FAM167A-AS1Q96KT0 104 aa12.47□□□□□ -0.41
SMAD3-210ENST00000559092 LINC00477Q96M19 166 aa12.47□□□□□ -0.41
SMAD3-210ENST00000559092 SLC25A2Q9BXI2 301 aa12.47□□□□□ -0.41
SMAD3-210ENST00000559092 HSPB11Q9Y547 144 aa12.47□□□□□ -0.41
SMAD3-210ENST00000559092 TIMM8BQ9Y5J9 83 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-210ENST00000559092 PYYP10082 97 aa12.46□□□□□ -0.41
SMAD3-210ENST00000559092 HTN1P15515 57 aa12.46□□□□□ -0.41
SMAD3-210ENST00000559092 HTN3P15516 51 aa12.46□□□□□ -0.41
SMAD3-210ENST00000559092 RPL12P30050 165 aaKnown RBP12.46□□□□□ -0.41
SMAD3-210ENST00000559092 GFI1BQ5VTD9 330 aa12.46□□□□□ -0.41
SMAD3-210ENST00000559092 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.41
SMAD3-210ENST00000559092 OR51M1Q9H341 326 aa12.46□□□□□ -0.41
SMAD3-210ENST00000559092 AAMDCQ9H7C9 122 aa12.46□□□□□ -0.41
SMAD3-210ENST00000559092 IFNA5P01569 189 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 NBEAP1P0C6P0 100 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 DEFB130BP0DP73 79 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 DEFB130AP0DP74 79 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 MIR17HGQ75NE6 70 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 CCDC28AQ8IWP9 274 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 SCGB1C1Q8TD33 95 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
SMAD3-210ENST00000559092 BLNKQ8WV28 456 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 FUT9Q9Y231 359 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 DNAH10Q8IVF4 4471 aa12.45□□□□□ -0.42
SMAD3-210ENST00000559092 CBY3A6NI87 242 aa12.44□□□□□ -0.42
SMAD3-210ENST00000559092 M0R3E3 92 aa12.44□□□□□ -0.42
SMAD3-210ENST00000559092 PTTG1O95997 202 aa12.44□□□□□ -0.42
SMAD3-210ENST00000559092 KIR3DS1Q14943 382 aa12.44□□□□□ -0.42
SMAD3-210ENST00000559092 PARD6GQ9BYG4 376 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-210ENST00000559092 MBD2Q9UBB5 411 aa12.44□□□□□ -0.42
SMAD3-210ENST00000559092 SLC25A5P05141 298 aaKnown RBP12.43□□□□□ -0.42
SMAD3-210ENST00000559092 FCN2Q15485 313 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 RNF212Q495C1 297 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 TMEM88Q6PEY1 159 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 C9orf47Q6ZRZ4 202 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 EXOC3-AS1Q8N2X6 119 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 C15orf53Q8NAA6 179 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 RNF141Q8WVD5 230 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 PYGO2Q9BRQ0 406 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 PAXXQ9BUH6 204 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 ALG5Q9Y673 324 aa12.43□□□□□ -0.42
SMAD3-210ENST00000559092 ATP5G1P05496 136 aa12.42□□□□□ -0.42
SMAD3-210ENST00000559092 NMBP08949 121 aa12.42□□□□□ -0.42
SMAD3-210ENST00000559092 ATP5G3P48201 142 aa12.42□□□□□ -0.42
SMAD3-210ENST00000559092 ICAM4Q14773 271 aa12.42□□□□□ -0.42
SMAD3-210ENST00000559092 FXYD5Q96DB9 178 aa12.42□□□□□ -0.42
SMAD3-210ENST00000559092 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
SMAD3-210ENST00000559092 AGPAT4-IT1Q9H0P7 198 aa12.42□□□□□ -0.42
SMAD3-210ENST00000559092 NOP10Q9NPE3 64 aaKnown RBP12.42□□□□□ -0.42
SMAD3-210ENST00000559092 TRAV12-3A0A0B4J271 114 aa12.41□□□□□ -0.42
SMAD3-210ENST00000559092 KLLNB2CW77 178 aa12.41□□□□□ -0.42
SMAD3-210ENST00000559092 ERCC8Q13216 396 aa12.41□□□□□ -0.42
SMAD3-210ENST00000559092 FFAR4Q5NUL3 377 aa12.41□□□□□ -0.42
SMAD3-210ENST00000559092 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms