RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 TREM1Q9NP99 234 aa2.93□□□□□ -1.94
TRAV15-201ENST00000556680 NDUFA4L2Q9NRX3 87 aa2.93□□□□□ -1.94
TRAV15-201ENST00000556680 KCNIP2Q9NS61 270 aa2.93□□□□□ -1.94
TRAV15-201ENST00000556680 PITPNC1Q9UKF7 332 aa2.93□□□□□ -1.94
TRAV15-201ENST00000556680 ZNF256Q9Y2P7 627 aaPredicted RBP2.93□□□□□ -1.94
TRAV15-201ENST00000556680 SOX21Q9Y651 276 aaPredicted RBP2.93□□□□□ -1.94
TRAV15-201ENST00000556680 CELSR2Q9HCU4 2923 aa2.93□□□□□ -1.94
TRAV15-201ENST00000556680 MED13LQ71F56 2210 aa2.93□□□□□ -1.94
TRAV15-201ENST00000556680 A0A1W2PPV4 95 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 XKRY2A2RUG3 117 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 LINC00862A6NCI5 91 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 FAM231BA6NCW3 169 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 E7EUB6 86 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 CORTO00230 105 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 HMGB3O15347 200 aaKnown RBP2.92□□□□□ -1.94
TRAV15-201ENST00000556680 IFNA1P01562 189 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 CRYGBP07316 175 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 NMBP08949 121 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 TAGLN2P37802 199 aaKnown RBP2.92□□□□□ -1.94
TRAV15-201ENST00000556680 CDC34P49427 236 aaPredicted RBP2.92□□□□□ -1.94
TRAV15-201ENST00000556680 RAB5CP51148 216 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 CEBPGP53567 150 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 FGF8P55075 233 aaPredicted RBP2.92□□□□□ -1.94
TRAV15-201ENST00000556680 WT1-ASQ06250 92 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 OR5I1Q13606 314 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 C2orf83Q53S99 150 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 Q56UQ5 140 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 MIC13Q5XKP0 118 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 UQCC3Q6UW78 93 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 STPG2Q8N412 459 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 Q8N9W7 124 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 LFNGQ8NES3 379 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 NPBQ8NG41 125 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 OR10G4Q8NGN3 311 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 OR10G9Q8NGN4 311 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 RNASEH2CQ8TDP1 164 aaKnown RBP2.92□□□□□ -1.94
TRAV15-201ENST00000556680 P2RX4Q99571 388 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 HSPB9Q9BQS6 159 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 PSMG3Q9BT73 122 aaPredicted RBP2.92□□□□□ -1.94
TRAV15-201ENST00000556680 NPCDR1Q9BY65 106 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 ACTR3CQ9C0K3 210 aaPredicted RBP2.92□□□□□ -1.94
TRAV15-201ENST00000556680 EIF5A2Q9GZV4 153 aaKnown RBP2.92□□□□□ -1.94
TRAV15-201ENST00000556680 VSIRQ9H7M9 311 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 NPVFQ9HCQ7 196 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 SLC39A9Q9NUM3 307 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 LINC00527Q9UJ94 153 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 TIMM9Q9Y5J7 89 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 S4R3C0 116 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 NOTCH3Q9UM47 2321 aa2.92□□□□□ -1.94
TRAV15-201ENST00000556680 VPS13CQ709C8 3753 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 GCN1Q92616 2671 aaKnown RBP2.91□□□□□ -1.94
TRAV15-201ENST00000556680 A0A096LNT2 108 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 CTXND1A0A1B0GTU2 59 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 A0A1B0GW64 132 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 IGLC7A0M8Q6 106 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 MAP1LC3B2A6NCE7 125 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 UMAD1C9J7I0 102 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 FGF16O43320 207 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 GNG7O60262 68 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 COX7A2P2O60397 106 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 MPDU1O75352 247 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 EIF3GO75821 320 aaKnown RBP eCLIP2.91□□□□□ -1.94
TRAV15-201ENST00000556680 OR2J3O76001 311 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 MT-CO2P00403 227 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 HLA-DRB1P01911 266 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 HBE1P02100 147 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 MBP02144 154 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 OR5G3P0C626 314 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 S100A1P23297 94 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 OR10J1P30954 320 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 GPX4P36969 197 aaPredicted RBP2.91□□□□□ -1.94
TRAV15-201ENST00000556680 RND2P52198 227 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 B2MP61769 119 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 SERF2P84101 59 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 AKIRIN2Q53H80 203 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 C6orf226Q5I0X4 101 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 LCN15Q6UWW0 184 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 DPPA3Q6W0C5 159 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 CYP2G1PQ6ZSU1 146 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 SLC35E3Q7Z769 313 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 TEX29Q8N6K0 151 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 Q8N6K4 173 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 C5orf56Q8N8D9 126 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 BPIFCQ8NFQ6 507 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 OR1L6Q8NGR2 347 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 SFT2D1Q8WV19 159 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 MGST2Q99735 147 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 FOXC2Q99958 501 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 PBDC1Q9BVG4 233 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 GGACTQ9BVM4 153 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 GGTLC1Q9BX51 225 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 PARD6GQ9BYG4 376 aaPredicted RBP2.91□□□□□ -1.94
TRAV15-201ENST00000556680 MAP1LC3BQ9GZQ8 125 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 ARV1Q9H2C2 271 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 DOK5Q9P104 306 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 GNG13Q9P2W3 67 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 F11RQ9Y624 299 aaKnown RBP2.91□□□□□ -1.94
TRAV15-201ENST00000556680 PXMP4Q9Y6I8 212 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 ABCA1O95477 2261 aa2.91□□□□□ -1.94
TRAV15-201ENST00000556680 APCP25054 2843 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms