RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 LOC102723971A0A1B0GUV8 181 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 M0R3E3 92 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 MPDU1O75352 247 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 EIF3GO75821 320 aaKnown RBP eCLIP5.78□□□□□ -1.48
VTI1B-206ENST00000556461 NDUFB4O95168 129 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 HBE1P02100 147 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 AZU1P20160 251 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 RHOBP62745 196 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 FCN2Q15485 313 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 FAM222AQ5U5X8 452 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 SLC25A2Q9BXI2 301 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 SMIM3Q9BZL3 60 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 WDR61Q9GZS3 305 aaKnown RBP5.78□□□□□ -1.48
VTI1B-206ENST00000556461 DKK2Q9UBU2 259 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 RNF24Q9Y225 148 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 HSPB11Q9Y547 144 aa5.78□□□□□ -1.48
VTI1B-206ENST00000556461 TRBV19A0A075B6N1 114 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 IGHV4-4A0A075B6R2 117 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 PLAC8L1A1L4L8 177 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 C11orf94C9JXX5 98 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 PTTG1O95997 202 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 INSP01308 110 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 AMBPP02760 352 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 SPART-AS1P0CW21 52 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 CT45A10P0DMU9 189 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 HIST1H1EP10412 219 aaKnown RBP5.77□□□□□ -1.49
VTI1B-206ENST00000556461 RPL12P30050 165 aaKnown RBP5.77□□□□□ -1.49
VTI1B-206ENST00000556461 RRN3P1Q2M238 152 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 LGALS9CQ6DKI2 356 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 EXOC3-AS1Q8N2X6 119 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 BLNKQ8WV28 456 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 ATP5SQ99766 215 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 TMEM208Q9BTX3 173 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 TMEM14CQ9P0S9 112 aa5.77□□□□□ -1.49
VTI1B-206ENST00000556461 YTHDF2Q9Y5A9 579 aaKnown RBP5.77□□□□□ -1.49
VTI1B-206ENST00000556461 TMEM189A5PLL7 270 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 J3KRW8 73 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 ERCC8Q13216 396 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 GUK1Q16774 197 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 Q5BKY6 102 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 GFI1BQ5VTD9 330 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 FXYD5Q96DB9 178 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 ZNF503Q96F45 646 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 LINC01587Q99440 93 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 NIPSNAP3BQ9BS92 247 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 PPP1R14DQ9NXH3 145 aa5.76□□□□□ -1.49
VTI1B-206ENST00000556461 NPIPB6E9PJ23 425 aa5.75□□□□□ -1.49
VTI1B-206ENST00000556461 ZNF253O75346 499 aa5.75□□□□□ -1.49
VTI1B-206ENST00000556461 OR10J4P0C629 311 aa5.75□□□□□ -1.49
VTI1B-206ENST00000556461 HTN1P15515 57 aa5.75□□□□□ -1.49
VTI1B-206ENST00000556461 HTN3P15516 51 aa5.75□□□□□ -1.49
VTI1B-206ENST00000556461 CDKN1BP46527 198 aa5.75□□□□□ -1.49
VTI1B-206ENST00000556461 FFAR4Q5NUL3 377 aa5.75□□□□□ -1.49
VTI1B-206ENST00000556461 OR10J6PQ8NGY7 276 aa5.75□□□□□ -1.49
VTI1B-206ENST00000556461 FUT9Q9Y231 359 aa5.75□□□□□ -1.49
VTI1B-206ENST00000556461 IGKV2-40A0A087WW87 121 aaPredicted RBP5.74□□□□□ -1.49
VTI1B-206ENST00000556461 IGKV2D-40P01614 121 aaPredicted RBP5.74□□□□□ -1.49
VTI1B-206ENST00000556461 NBEAP1P0C6P0 100 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 PET100P0DJ07 73 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 TCTAP57738 103 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 TAS2R60P59551 318 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 ICAM4Q14773 271 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 FAM122CQ6P4D5 195 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 Q6ZQT7 251 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 RNF141Q8WVD5 230 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 MRPL53Q96EL3 112 aaKnown RBP5.74□□□□□ -1.49
VTI1B-206ENST00000556461 PHYHIPLQ96FC7 376 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 PAXXQ9BUH6 204 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 MRPL32Q9BYC8 188 aaKnown RBP5.74□□□□□ -1.49
VTI1B-206ENST00000556461 AGPAT4-IT1Q9H0P7 198 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 MED28Q9H204 178 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 OR51M1Q9H341 326 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 TIMM9Q9Y5J7 89 aa5.74□□□□□ -1.49
VTI1B-206ENST00000556461 DYNC1H1Q14204 4646 aaKnown RBP5.73□□□□□ -1.49
VTI1B-206ENST00000556461 TRAV12-3A0A0B4J271 114 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 C17orf112F2Z3M2 114 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 IFNA5P01569 189 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 TSPOP30536 169 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 RAB2AP61019 212 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 DAD1P61803 113 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 CD300CQ08708 224 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 PDE6HQ13956 83 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 OXA1LQ15070 435 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 PRR9Q5T870 116 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 TMEM256Q8N2U0 113 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 SCGB1C1Q8TD33 95 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 RNASE8Q8TDE3 154 aaKnown RBP5.73□□□□□ -1.49
VTI1B-206ENST00000556461 FAM19A4Q96LR4 140 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 ODF3Q96PU9 254 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 VGLL1Q99990 258 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 KCNIP2Q9NS61 270 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 PRELID1Q9Y255 219 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 DNAH11Q96DT5 4516 aa5.73□□□□□ -1.49
VTI1B-206ENST00000556461 PKHD1P08F94 4074 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 PKD1P98161 4303 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 TEX48A0A1B0GUV7 120 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 LYRM9A8MSI8 78 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 G3V3Q6 166 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 H7BYZ3 331 aa5.72□□□□□ -1.49
VTI1B-206ENST00000556461 OR7C2O60412 319 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms