RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
VTI1B-204ENST00000554659 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
VTI1B-204ENST00000554659 LRRK1Q38SD2 2015 aa11.27□□□□□ -0.61
VTI1B-204ENST00000554659 ERCC8Q13216 396 aa11.27□□□□□ -0.61
VTI1B-204ENST00000554659 LY6G5BQ8NDX9 201 aa11.27□□□□□ -0.61
VTI1B-204ENST00000554659 ABCA4P78363 2273 aa11.26□□□□□ -0.61
VTI1B-204ENST00000554659 A0A1B0GUS0 222 aa11.26□□□□□ -0.61
VTI1B-204ENST00000554659 A0A087WWL8 130 aa11.26□□□□□ -0.61
VTI1B-204ENST00000554659 CYYR1Q96J86 154 aa11.26□□□□□ -0.61
VTI1B-204ENST00000554659 PRSS46E5RG02 174 aa11.26□□□□□ -0.61
VTI1B-204ENST00000554659 V9GYV3 84 aa11.26□□□□□ -0.61
VTI1B-204ENST00000554659 CREBBPQ92793 2442 aa11.25□□□□□ -0.61
VTI1B-204ENST00000554659 GATA4P43694 442 aa11.25□□□□□ -0.61
VTI1B-204ENST00000554659 Q6ZS92 163 aa11.25□□□□□ -0.61
VTI1B-204ENST00000554659 MED12Q93074 2177 aa11.25□□□□□ -0.61
VTI1B-204ENST00000554659 Q8TCH9 128 aa11.25□□□□□ -0.61
VTI1B-204ENST00000554659 TSSC4Q9Y5U2 329 aaPredicted RBP11.25□□□□□ -0.61
VTI1B-204ENST00000554659 TRPM7Q96QT4 1865 aa11.25□□□□□ -0.61
VTI1B-204ENST00000554659 NDUFB8O95169 186 aa11.25□□□□□ -0.61
VTI1B-204ENST00000554659 FAM104BQ5XKR9 115 aa11.25□□□□□ -0.61
VTI1B-204ENST00000554659 THSD7BQ9C0I4 1608 aa11.25□□□□□ -0.61
VTI1B-204ENST00000554659 IGLC2P0DOY2 106 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 IGLC3P0DOY3 106 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 ZNF833PQ6ZTB9 187 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 SPTAN1Q13813 2472 aaKnown RBP11.24□□□□□ -0.61
VTI1B-204ENST00000554659 H3BMM0 161 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 ETDBQ3ZM63 59 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 UBE2WQ96B02 151 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 SMIM27A0A1W2PRY6 76 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 H3BUX3 64 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 Q6ZWC4 215 aa11.24□□□□□ -0.61
VTI1B-204ENST00000554659 IL15RAQ13261 267 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 PTPRDP23468 1912 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 COL8A2P25067 703 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 SSC4DQ8WTU2 575 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 SAP30O75446 220 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 WISP1O95388 367 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 SPANXA1Q9NS26 97 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 TMEM213A2RRL7 107 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 DTX1Q86Y01 620 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 C11orf52Q96A22 123 aa11.23□□□□□ -0.61
VTI1B-204ENST00000554659 MMP23AO75900 390 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 IGLV3-1P01715 115 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 RPL32P62910 135 aaKnown RBP11.22□□□□□ -0.61
VTI1B-204ENST00000554659 SLAQ13239 276 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 PROK2Q9HC23 129 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 B4DSR2 109 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 CFHR2P36980 270 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 TCF15Q12870 199 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 ZNF524Q96C55 264 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 SOCS3O14543 225 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 NPSP0C0P6 89 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 TCF20Q9UGU0 1960 aaKnown RBP11.22□□□□□ -0.61
VTI1B-204ENST00000554659 WDR86Q86TI4 376 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 DAZ1Q9NQZ3 744 aaKnown RBP11.22□□□□□ -0.61
VTI1B-204ENST00000554659 NEGR1Q7Z3B1 354 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 Q8N8P6 123 aa11.22□□□□□ -0.61
VTI1B-204ENST00000554659 TSC2P49815 1807 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 LYPD6BQ8NI32 183 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
VTI1B-204ENST00000554659 INAFM2P0DMQ5 153 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 C17orf58Q2M2W7 97 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 RSPO1Q2MKA7 263 aaPredicted RBP11.21□□□□□ -0.61
VTI1B-204ENST00000554659 Q6ZR03 302 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 HAPLN4Q86UW8 402 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 UBE2E2Q96LR5 201 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 TMEM14CQ9P0S9 112 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 MYLKQ15746 1914 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 THADAQ6YHU6 1953 aa11.21□□□□□ -0.61
VTI1B-204ENST00000554659 PLXNA4Q9HCM2 1894 aa11.21□□□□□ -0.62
VTI1B-204ENST00000554659 WIPF3A6NGB9 483 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 C9orf118A6NHY6 69 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 SLC25A16P16260 332 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 RPL35AP18077 110 aaKnown RBP11.2□□□□□ -0.62
VTI1B-204ENST00000554659 BRD3OSQ6XYD6 125 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 TRPT1Q86TN4 253 aaKnown RBP11.2□□□□□ -0.62
VTI1B-204ENST00000554659 PPDPFLQ8WWR9 84 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 TRBV20-1A0A075B6N2 111 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 E7EQL1 145 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 C8orf49Q96NF6 230 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 MORN5Q5VZ52 161 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 LINC00311Q8N616 119 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 FNDC1Q4ZHG4 1894 aaPredicted RBP11.2□□□□□ -0.62
VTI1B-204ENST00000554659 ZNF114Q8NC26 417 aa11.2□□□□□ -0.62
VTI1B-204ENST00000554659 IGHV1-24A0A0C4DH33 117 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 C15orf65H3BRN8 121 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 SAA4P35542 130 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 SUMO4Q6EEV6 95 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 TMEM141Q96I45 108 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 TP53TG1Q9Y2A0 90 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 PRSS57Q6UWY2 283 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 KIAA2026Q5HYC2 2103 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 LGALS9BQ3B8N2 356 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 LGALS9CQ6DKI2 356 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 IL17RELQ6ZVW7 336 aa11.19□□□□□ -0.62
VTI1B-204ENST00000554659 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms