RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ZNF493Q6ZR52 646 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 C20orf196Q8IYI0 205 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 MAPKAPK5-AS1Q8N8E1 139 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 SUMF2Q8NBJ7 301 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 FAM19A4Q96LR4 140 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 AMELYQ99218 206 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 TUBA4BQ9H853 241 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 FUT9Q9Y231 359 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF257Q9Y2Q1 563 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 AMMECR1Q9Y4X0 333 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 PRR14LQ5THK1 2151 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 STAB1Q9NY15 2570 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 TRAV8-2A0A0B4J237 113 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 TRAV5A0A0B4J249 113 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 IGKV1D-13A0A0B4J2D9 117 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 UNC119BA6NIH7 251 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 SDCBPO00560 298 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BKO60814 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 SRSF10O75494 262 aaKnown RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 DEDDO75618 318 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BJP06899 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 IGKV1-13P0DP09 117 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 IFITM1P13164 125 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 PPIBP23284 216 aaKnown RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BOP23527 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BBP33778 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 RBMXP38159 391 aaKnown RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HMGA2P52926 109 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BDP58876 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BCP62807 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST2H2BEQ16778 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM183BQ1AE95 376 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 Q499Y3 187 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 PIK3CD-AS1Q5SR53 167 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 C10orf91Q5T1B1 145 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 MRPL54Q6P161 138 aaKnown RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 Q6ZVQ6 151 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 TCF23Q7RTU1 214 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 ODF3L1Q8IXM7 274 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 OR1J1Q8NGS3 322 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 OR52N5Q8NH56 324 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 CLDND2Q8NHS1 167 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 OSR1Q8TAX0 266 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 PHLDA1Q8WV24 401 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 PPP1R1CQ8WVI7 109 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BHQ93079 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BNQ99877 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H2BMQ99879 126 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 SSBP3Q9BWW4 388 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM133Q9H2Q1 129 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 BCL2L10Q9HD36 194 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 RPS10P5Q9NQ39 176 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 OR5V1Q9UGF6 321 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 WASHC3Q9Y3C0 194 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 IGLV1-36A0A0B4J1U3 117 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 IGHV3-15A0A0B4J1V0 119 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 IGHV3-64DA0A0J9YX35 117 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 TAX1BP3O14907 124 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 UBL3O95164 117 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 MT-ND6P03923 174 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 CRYBB3P26998 211 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 MYCNOSP40205 109 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 KLF9Q13886 244 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 VMA21Q3ZAQ7 101 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM155Q4W5P6 130 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 UFSP1Q6NVU6 142 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 Q6ZUT4 128 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 AAED1Q7RTV5 226 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 FAM19A3Q7Z5A8 133 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 C10orf126Q8N4M7 172 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 KCNRGQ8N5I3 272 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF491Q8N8L2 437 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 RFESDQ8TAC1 157 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 RITA1Q96K30 269 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 SPIN2AQ99865 258 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 SPIN2BQ9BPZ2 258 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 SEC11CQ9BY50 192 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 C11orf68Q9H3H3 251 aaKnown RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 ANAPC10Q9UM13 185 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 VSIG4Q9Y279 399 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 SIGLEC7Q9Y286 467 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 V9GY05 133 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 TRGV11A0A075B6L2 103 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 A0A1B0GWA3 101 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 C7orf66A4D0T2 115 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 GRIFINA4D1Z8 144 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF503-AS2A6NEH8 195 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 OOSP1A8MZH6 123 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 C9JQL5 133 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 LINC01619G3V211 115 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 LY6LH3BQJ8 138 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 BCL2P10415 239 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 PIPP12273 146 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 LMO1P25800 156 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 INSL3P51460 131 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 TAS2R46P59540 309 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 ENDOGQ14249 297 aaKnown RBP2.1□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF718Q3SXZ3 478 aa2.1□□□□□ -2.07
PRPF39-206ENST00000554429 GAGE13Q4V321 117 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms