RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 NPCDR1Q9BY65 106 aa4.71□□□□□ -1.66
SLIRP-203ENST00000554074 WDR61Q9GZS3 305 aaKnown RBP4.71□□□□□ -1.66
SLIRP-203ENST00000554074 SLC25A22Q9H936 323 aa4.71□□□□□ -1.66
SLIRP-203ENST00000554074 DNAJC4Q9NNZ3 241 aa4.71□□□□□ -1.66
SLIRP-203ENST00000554074 HIGD1AQ9Y241 93 aa4.71□□□□□ -1.66
SLIRP-203ENST00000554074 IGHV3OR16-12A0A075B7B8 117 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 A0A087X0K7 114 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 UBE2L5PA0A1B0GUS4 154 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 LOC102723971A0A1B0GUV8 181 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 G3V3Q6 166 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 MBP02144 154 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 C1QBP02746 253 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 LINC00869P0C866 280 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 ORM2P19652 201 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 GATA2P23769 480 aaPredicted RBP4.7□□□□□ -1.66
SLIRP-203ENST00000554074 EMP1P54849 157 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 SERF2P84101 59 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 CLINT1Q14677 625 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 RNF212Q495C1 297 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 LINC01559Q495D7 138 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 Q5BKY6 102 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 KCNRGQ8N5I3 272 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 GNPNAT1Q96EK6 184 aaPredicted RBP4.7□□□□□ -1.66
SLIRP-203ENST00000554074 PSMG3Q9BT73 122 aaPredicted RBP4.7□□□□□ -1.66
SLIRP-203ENST00000554074 SCRT1Q9BWW7 348 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 SLC25A39Q9BZJ4 359 aaPredicted RBP4.7□□□□□ -1.66
SLIRP-203ENST00000554074 SLC39A9Q9NUM3 307 aa4.7□□□□□ -1.66
SLIRP-203ENST00000554074 YTHDF2Q9Y5A9 579 aaKnown RBP4.7□□□□□ -1.66
SLIRP-203ENST00000554074 TRAV8-2A0A0B4J237 113 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 A0A1B0GVY2 172 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 RNF222A6NCQ9 220 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 LYRM9A8MSI8 78 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 CRXO43186 299 aaPredicted RBP4.69□□□□□ -1.66
SLIRP-203ENST00000554074 COX7A2P2O60397 106 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 INSP01308 110 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 CXCL2P19875 107 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 CNN1P51911 297 aaKnown RBP4.69□□□□□ -1.66
SLIRP-203ENST00000554074 FAM3BP58499 235 aaPredicted RBP4.69□□□□□ -1.66
SLIRP-203ENST00000554074 ACOT6Q3I5F7 207 aaPredicted RBP4.69□□□□□ -1.66
SLIRP-203ENST00000554074 C10orf113Q5VZT2 155 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 TMEM256Q8N2U0 113 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 C15orf53Q8NAA6 179 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 OR2G3Q8NGZ4 309 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 ARPC5LQ9BPX5 153 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 TMEM208Q9BTX3 173 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 MRPL32Q9BYC8 188 aaKnown RBP4.69□□□□□ -1.66
SLIRP-203ENST00000554074 ARL6Q9H0F7 186 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 ARV1Q9H2C2 271 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 PXMP4Q9Y6I8 212 aa4.69□□□□□ -1.66
SLIRP-203ENST00000554074 KANTRA0A1W2PQU2 76 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 BOLA2-SMG1P6H3BVE0 249 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 MRPS12O15235 138 aaKnown RBP4.68□□□□□ -1.66
SLIRP-203ENST00000554074 ARPC5O15511 151 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 OR5G3P0C626 314 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 M6PRP20645 277 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 TAS2R45P59539 299 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 DAD1P61803 113 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 RHOBP62745 196 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 PSG3Q16557 428 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 GUK1Q16774 197 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 SPINK13Q1W4C9 94 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 MIC13Q5XKP0 118 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 EIF5AL1Q6IS14 154 aaKnown RBP4.68□□□□□ -1.66
SLIRP-203ENST00000554074 LCN15Q6UWW0 184 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 Q6ZR54 194 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 LINC00305Q7Z4B0 112 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 BPIFA4PQ86YQ2 179 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 ZNF738Q8NE65 137 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 OR8A1Q8NGG7 326 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 SLC50A1Q9BRV3 221 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 TMEM14CQ9P0S9 112 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 PKHD1P08F94 4074 aa4.68□□□□□ -1.66
SLIRP-203ENST00000554074 PLAC8L1A1L4L8 177 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 M0R2Z0 102 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 RTL8CO15255 209 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 BCL2L11O43521 198 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 ZNF253O75346 499 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 TAS2R60P59551 318 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 PDE6HQ13956 83 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 ZFP69Q49AA0 526 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 FFAR4Q5NUL3 377 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 TMEM88Q6PEY1 159 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 PATE2Q6UY27 113 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 UBE2DNLQ8IWF7 75 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 RNF182Q8N6D2 247 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 OR11H4Q8NGC9 324 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 STOML3Q8TAV4 291 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 TMEM37Q8WXS4 190 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 UHRF2Q96PU4 802 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 C20orf144Q9BQM9 153 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 SMIM3Q9BZL3 60 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 WFDC1Q9HC57 220 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
SLIRP-203ENST00000554074 hCG_2014768A0A024R1R8 64 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 PRSS29PA6NIE9 313 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 ZNF705GA8MUZ8 300 aaPredicted RBP4.66□□□□□ -1.66
SLIRP-203ENST00000554074 UMAD1C9J7I0 102 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 PFDN1O60925 122 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 SEC11BP0C7V7 166 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 TPT1P13693 172 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms