RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ACTL10Q5JWF8 245 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 UQCC3Q6UW78 93 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 POM121L12Q8N7R1 296 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 SCGB1C1Q8TD33 95 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 TMEM37Q8WXS4 190 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 ARPC5LQ9BPX5 153 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 KCNIP2Q9NS61 270 aa8.52□□□□□ -1.05
CKAP4-202ENST00000552828 TMA7Q9Y2S6 64 aaKnown RBP8.52□□□□□ -1.05
CKAP4-202ENST00000552828 LOC105371267A0A1B0GV96 52 aa8.51□□□□□ -1.05
CKAP4-202ENST00000552828 C17orf112F2Z3M2 114 aa8.51□□□□□ -1.05
CKAP4-202ENST00000552828 PSMB3P49720 205 aa8.51□□□□□ -1.05
CKAP4-202ENST00000552828 LINC00052Q96N35 136 aa8.51□□□□□ -1.05
CKAP4-202ENST00000552828 AQP10Q96PS8 301 aa8.51□□□□□ -1.05
CKAP4-202ENST00000552828 CLEC5AQ9NY25 188 aa8.51□□□□□ -1.05
CKAP4-202ENST00000552828 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
CKAP4-202ENST00000552828 DEFB131BA0A096LNP1 70 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 RAB19A4D1S5 217 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 TEX46H3BTG2 121 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 ISLRO14498 428 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 RTL8CO15255 209 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 P0DMU3 169 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 FAM231AP0DMU4 169 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 FAM231CP0DMU5 169 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 BPIFA4PQ86YQ2 179 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 ZNF471Q9BX82 626 aaPredicted RBP8.5□□□□□ -1.05
CKAP4-202ENST00000552828 C1QTNF4Q9BXJ3 329 aa8.5□□□□□ -1.05
CKAP4-202ENST00000552828 SOCS3O14543 225 aa8.49□□□□□ -1.05
CKAP4-202ENST00000552828 TPT1P13693 172 aaKnown RBP8.49□□□□□ -1.05
CKAP4-202ENST00000552828 NUTF2P61970 127 aaKnown RBP8.49□□□□□ -1.05
CKAP4-202ENST00000552828 EIF5AP63241 154 aaKnown RBP8.49□□□□□ -1.05
CKAP4-202ENST00000552828 LGALS9BQ3B8N2 356 aa8.49□□□□□ -1.05
CKAP4-202ENST00000552828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.49□□□□□ -1.05
CKAP4-202ENST00000552828 NDUFAF3Q9BU61 184 aa8.49□□□□□ -1.05
CKAP4-202ENST00000552828 PARD6GQ9BYG4 376 aaPredicted RBP8.49□□□□□ -1.05
CKAP4-202ENST00000552828 WFDC1Q9HC57 220 aa8.49□□□□□ -1.05
CKAP4-202ENST00000552828 A0A087X0K7 114 aa8.48□□□□□ -1.05
CKAP4-202ENST00000552828 PRSS29PA6NIE9 313 aa8.48□□□□□ -1.05
CKAP4-202ENST00000552828 H3BMM0 161 aa8.48□□□□□ -1.05
CKAP4-202ENST00000552828 TAAR5O14804 337 aa8.48□□□□□ -1.05
CKAP4-202ENST00000552828 ZNF266Q14584 549 aa8.48□□□□□ -1.05
CKAP4-202ENST00000552828 MORN5Q5VZ52 161 aa8.48□□□□□ -1.05
CKAP4-202ENST00000552828 C17orf77Q96MU5 243 aa8.48□□□□□ -1.05
CKAP4-202ENST00000552828 NEU1Q99519 415 aa8.48□□□□□ -1.05
CKAP4-202ENST00000552828 TRAV5A0A0B4J249 113 aa8.47□□□□□ -1.05
CKAP4-202ENST00000552828 MRPS12O15235 138 aaKnown RBP8.47□□□□□ -1.05
CKAP4-202ENST00000552828 SCO1O75880 301 aa8.47□□□□□ -1.05
CKAP4-202ENST00000552828 GCSAMLQ5JQS6 135 aa8.47□□□□□ -1.05
CKAP4-202ENST00000552828 FFAR4Q5NUL3 377 aa8.47□□□□□ -1.05
CKAP4-202ENST00000552828 FAM78BQ5VT40 261 aa8.47□□□□□ -1.05
CKAP4-202ENST00000552828 ZNF705AQ6ZN79 300 aaPredicted RBP8.47□□□□□ -1.05
CKAP4-202ENST00000552828 BAP18Q8IXM2 172 aa8.47□□□□□ -1.05
CKAP4-202ENST00000552828 CYTL1Q9NRR1 136 aa8.47□□□□□ -1.05
CKAP4-202ENST00000552828 RPRMQ9NS64 109 aa8.47□□□□□ -1.05
CKAP4-202ENST00000552828 XCL2Q9UBD3 114 aa8.47□□□□□ -1.05
CKAP4-202ENST00000552828 ZNF705FA8MVS1 300 aaPredicted RBP8.46□□□□□ -1.06
CKAP4-202ENST00000552828 ZNF705DP0CH99 300 aaPredicted RBP8.46□□□□□ -1.06
CKAP4-202ENST00000552828 ZNF705BP0CI00 300 aaPredicted RBP8.46□□□□□ -1.06
CKAP4-202ENST00000552828 HLA-DRB4P13762 266 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 SPATA31B1PQ5VZV4 182 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 EIF5AL1Q6IS14 154 aaKnown RBP8.46□□□□□ -1.06
CKAP4-202ENST00000552828 EBLN2Q6P2I7 272 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 LCN15Q6UWW0 184 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 FOXI2Q6ZQN5 318 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 Q6ZR54 194 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 RNF141Q8WVD5 230 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 SAT2Q96F10 170 aaPredicted RBP8.46□□□□□ -1.06
CKAP4-202ENST00000552828 FAM210BQ96KR6 192 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 C20orf173Q96LM9 149 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 MRPL32Q9BYC8 188 aaKnown RBP8.46□□□□□ -1.06
CKAP4-202ENST00000552828 SAV1Q9H4B6 383 aaPredicted RBP8.46□□□□□ -1.06
CKAP4-202ENST00000552828 TMEM14CQ9P0S9 112 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 TIMM9Q9Y5J7 89 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 HLA-DRB4X5D2U9 266 aa8.46□□□□□ -1.06
CKAP4-202ENST00000552828 TRAV8-2A0A0B4J237 113 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 TMEM189A5PLL7 270 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 SMIM9A6NGZ8 99 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 SNRPCP09234 159 aaKnown RBP8.45□□□□□ -1.06
CKAP4-202ENST00000552828 SPART-AS1P0CW21 52 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 IGLC2P0DOY2 106 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 GUK1Q16774 197 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 IGFL4Q6B9Z1 124 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 HSD17B11Q8NBQ5 300 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 CLUHP3Q96NS8 147 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 SLC50A1Q9BRV3 221 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 FUT9Q9Y231 359 aa8.45□□□□□ -1.06
CKAP4-202ENST00000552828 BORCS7-ASMTA0A0B4J1R7 106 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 H3BQ15 152 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 M0R2N4 97 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 HIST1H1EP10412 219 aaKnown RBP8.44□□□□□ -1.06
CKAP4-202ENST00000552828 DEFB1P60022 68 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 RHOBP62745 196 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 PSG3Q16557 428 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 ACOT6Q3I5F7 207 aaPredicted RBP8.44□□□□□ -1.06
CKAP4-202ENST00000552828 FAM74A1Q5RGS3 127 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 C10orf91Q5T1B1 145 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 GDF5OSQ5U4N7 250 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 MIR17HGQ75NE6 70 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 RNF182Q8N6D2 247 aa8.44□□□□□ -1.06
CKAP4-202ENST00000552828 ZNF738Q8NE65 137 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms