RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 FOXF1Q12946 379 aa4.05□□□□□ -1.76
VPS29-210ENST00000552130 CIRBPQ14011 172 aaKnown RBP4.05□□□□□ -1.76
VPS29-210ENST00000552130 KRTAP24-1Q3LI83 254 aa4.05□□□□□ -1.76
VPS29-210ENST00000552130 MIC13Q5XKP0 118 aa4.05□□□□□ -1.76
VPS29-210ENST00000552130 ABCA7Q8IZY2 2146 aa4.05□□□□□ -1.76
VPS29-210ENST00000552130 CCL4L1Q8NHW4 92 aa4.05□□□□□ -1.76
VPS29-210ENST00000552130 LSM10Q969L4 123 aaKnown RBP4.05□□□□□ -1.76
VPS29-210ENST00000552130 AQP10Q96PS8 301 aa4.05□□□□□ -1.76
VPS29-210ENST00000552130 TAS2R4Q9NYW5 299 aa4.05□□□□□ -1.76
VPS29-210ENST00000552130 TANC2Q9HCD6 1990 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 ALPK3Q96L96 1907 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 OOSP1A8MZH6 123 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 ZNF736B4DX44 427 aaPredicted RBP4.04□□□□□ -1.76
VPS29-210ENST00000552130 TMEM262E9PQX1 116 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 M0R2P5 195 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 LYRM1O43325 122 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 HYPMO75409 117 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 IGHV3-53P01767 116 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 COX6A1P12074 109 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 FUT5Q11128 374 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 Q6P435 159 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 CLEC2BQ92478 149 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 VAMP8Q9BV40 100 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 ASF1BQ9NVP2 202 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 NHP2Q9NX24 153 aaKnown RBP4.04□□□□□ -1.76
VPS29-210ENST00000552130 BAZ1AQ9NRL2 1556 aaPredicted RBP4.04□□□□□ -1.76
VPS29-210ENST00000552130 SCN1AP35498 2009 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 ANKRD26Q9UPS8 1709 aa4.04□□□□□ -1.76
VPS29-210ENST00000552130 FRMPD1Q5SYB0 1578 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 H3BPC8 53 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 IGLV7-43P04211 117 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 DNAH10OSP0CZ25 163 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 PEBP1P30086 187 aaKnown RBP4.03□□□□□ -1.76
VPS29-210ENST00000552130 OR5AK2Q8NH90 309 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 RETNLBQ9BQ08 111 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 NABP2Q9BQ15 211 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 LINC00467Q9BRT7 94 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 TPRKBQ9Y3C4 175 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 AP4S1Q9Y587 144 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 TIMM9Q9Y5J7 89 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 NISCHQ9Y2I1 1504 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 HEATR5AQ86XA9 2040 aa4.03□□□□□ -1.76
VPS29-210ENST00000552130 KDM5AP29375 1690 aaKnown RBP4.03□□□□□ -1.76
VPS29-210ENST00000552130 CCDC88AQ3V6T2 1871 aa4.03□□□□□ -1.77
VPS29-210ENST00000552130 ADGRB1O14514 1584 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 TMEM235A6NFC5 223 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 SHBGP04278 402 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 LINC00032P0C843 101 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 CKS2P33552 79 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 FXYD2P54710 66 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 OR2T2Q6IF00 324 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 Q6ZS92 163 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 RIC1Q4ADV7 1423 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 ANKRD36BQ8N2N9 1353 aa4.02□□□□□ -1.77
VPS29-210ENST00000552130 KIF26AQ9ULI4 1882 aaPredicted RBP4.01□□□□□ -1.77
VPS29-210ENST00000552130 CGAP01215 116 aa4.01□□□□□ -1.77
VPS29-210ENST00000552130 IGLC1P0CG04 106 aa4.01□□□□□ -1.77
VPS29-210ENST00000552130 LGALSLQ3ZCW2 172 aaPredicted RBP4.01□□□□□ -1.77
VPS29-210ENST00000552130 TNFRSF19Q9NS68 423 aa4.01□□□□□ -1.77
VPS29-210ENST00000552130 AGRNO00468 2067 aa4.01□□□□□ -1.77
VPS29-210ENST00000552130 DOCK9Q9BZ29 2069 aa4.01□□□□□ -1.77
VPS29-210ENST00000552130 MYO5AQ9Y4I1 1855 aaKnown RBP4.01□□□□□ -1.77
VPS29-210ENST00000552130 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
VPS29-210ENST00000552130 ZNF646O15015 1829 aaPredicted RBP4□□□□□ -1.77
VPS29-210ENST00000552130 TEX14Q8IWB6 1497 aa4□□□□□ -1.77
VPS29-210ENST00000552130 MUC21A0A0G2JKD1 596 aa4□□□□□ -1.77
VPS29-210ENST00000552130 TRBV10-2A0A0K0K1G8 114 aa4□□□□□ -1.77
VPS29-210ENST00000552130 PANO1I0J062 215 aa4□□□□□ -1.77
VPS29-210ENST00000552130 DEFA4P12838 97 aa4□□□□□ -1.77
VPS29-210ENST00000552130 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
VPS29-210ENST00000552130 LYZL1Q6UWQ5 148 aa4□□□□□ -1.77
VPS29-210ENST00000552130 ATP11AUNQ6ZP68 121 aa4□□□□□ -1.77
VPS29-210ENST00000552130 PSMF1Q92530 271 aa4□□□□□ -1.77
VPS29-210ENST00000552130 HYLS1Q96M11 299 aa4□□□□□ -1.77
VPS29-210ENST00000552130 FAM215AQ9Y5M1 114 aa4□□□□□ -1.77
VPS29-210ENST00000552130 FAM24AA6NFZ4 105 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 A6NN06 94 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 H7C2G1 150 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 GNRH2O43555 120 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 ZNF861PO60384 105 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 EDF1O60869 148 aaKnown RBP3.99□□□□□ -1.77
VPS29-210ENST00000552130 CPSF4O95639 269 aaKnown RBP3.99□□□□□ -1.77
VPS29-210ENST00000552130 GYPBP06028 91 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 ZNF22P17026 224 aaPredicted RBP3.99□□□□□ -1.77
VPS29-210ENST00000552130 ETV6P41212 452 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 NPC2P61916 151 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 ESRGQ1W209 222 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 C6orf52Q5T4I8 152 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 FAM27BQ5VT28 67 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 Q8IYB0 196 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 POP5Q969H6 163 aaKnown RBP3.99□□□□□ -1.77
VPS29-210ENST00000552130 ATG5Q9H1Y0 275 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 LINC00312Q9Y6C7 94 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 ARHGAP21Q5T5U3 1957 aa3.99□□□□□ -1.77
VPS29-210ENST00000552130 GLI3P10071 1580 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 RRBP1Q9P2E9 1410 aaKnown RBP3.98□□□□□ -1.77
VPS29-210ENST00000552130 IL7P13232 177 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 COL8A2P25067 703 aa3.98□□□□□ -1.77
VPS29-210ENST00000552130 ZNF816Q0VGE8 651 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms