RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 VGLL1Q99990 258 aa12.77□□□□□ -0.36
RBFOX1-212ENST00000550418 VCYO14598 125 aa12.77□□□□□ -0.37
RBFOX1-212ENST00000550418 SPAG8Q99932 426 aaPredicted RBP12.77□□□□□ -0.37
RBFOX1-212ENST00000550418 PRSS46E5RG02 174 aa12.77□□□□□ -0.37
RBFOX1-212ENST00000550418 H3BMG7 143 aa12.77□□□□□ -0.37
RBFOX1-212ENST00000550418 SIGLEC15Q6ZMC9 328 aa12.77□□□□□ -0.37
RBFOX1-212ENST00000550418 C14orf178Q8N769 122 aaPredicted RBP12.77□□□□□ -0.37
RBFOX1-212ENST00000550418 TMEM75Q8N9X5 138 aa12.77□□□□□ -0.37
RBFOX1-212ENST00000550418 GAFA1Q96PS6 74 aa12.77□□□□□ -0.37
RBFOX1-212ENST00000550418 PLSCR4Q9NRQ2 329 aa12.77□□□□□ -0.37
RBFOX1-212ENST00000550418 NTN3O00634 580 aaPredicted RBP12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 SIVA1O15304 175 aa12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 IGFL4Q6B9Z1 124 aa12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 RNASE6Q93091 150 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 CSTL1Q9H114 145 aa12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 C15orf32Q32M92 178 aa12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 NEU4Q8WWR8 484 aaPredicted RBP12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 SIGLEC8Q9NYZ4 499 aa12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 LYNX1G3V0Z9 82 aa12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 LYNX1P0DP58 116 aa12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 Q0VFX4 171 aa12.76□□□□□ -0.37
RBFOX1-212ENST00000550418 MORN3Q6PF18 240 aaPredicted RBP12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 WIPF2Q8TF74 440 aaPredicted RBP12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 DEFB104AQ8WTQ1 72 aa12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 NDUFA4L2Q9NRX3 87 aa12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 PRR20EP86478 221 aa12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 PRR20CP86479 221 aa12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 PRR20DP86480 221 aa12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 PRR20BP86481 221 aa12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 PRR20AP86496 221 aa12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 PAX8Q06710 450 aa12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 KLF5Q13887 457 aaPredicted RBP12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 MRPL51Q4U2R6 128 aaKnown RBP12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 NPC2P61916 151 aa12.75□□□□□ -0.37
RBFOX1-212ENST00000550418 ASPHD1Q5U4P2 390 aa12.74□□□□□ -0.37
RBFOX1-212ENST00000550418 NPFFR1Q9GZQ6 430 aa12.74□□□□□ -0.37
RBFOX1-212ENST00000550418 FAM168AQ92567 244 aa12.74□□□□□ -0.37
RBFOX1-212ENST00000550418 ZNF48Q96MX3 618 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-212ENST00000550418 ZNF876PQ49A33 203 aa12.74□□□□□ -0.37
RBFOX1-212ENST00000550418 ZNF474Q6S9Z5 364 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-212ENST00000550418 AMTNQ6UX39 209 aa12.74□□□□□ -0.37
RBFOX1-212ENST00000550418 ZNF747Q9BV97 191 aa12.74□□□□□ -0.37
RBFOX1-212ENST00000550418 ATP5J2P56134 94 aa12.73□□□□□ -0.37
RBFOX1-212ENST00000550418 Q8N8P6 123 aa12.73□□□□□ -0.37
RBFOX1-212ENST00000550418 LINC01587Q99440 93 aa12.73□□□□□ -0.37
RBFOX1-212ENST00000550418 K7ERJ3 54 aa12.73□□□□□ -0.37
RBFOX1-212ENST00000550418 TRAV8-3A0A0A6YYJ7 113 aa12.73□□□□□ -0.37
RBFOX1-212ENST00000550418 TMEM178BH3BS89 294 aa12.73□□□□□ -0.37
RBFOX1-212ENST00000550418 C9orf139Q6ZV77 190 aa12.73□□□□□ -0.37
RBFOX1-212ENST00000550418 Q8NFD4 153 aa12.73□□□□□ -0.37
RBFOX1-212ENST00000550418 PIMREGQ9BSJ6 248 aa12.73□□□□□ -0.37
RBFOX1-212ENST00000550418 YLPM1P49750 1951 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 TRBV19A0A075B6N1 114 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 CEND1Q8N111 149 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 SLC25A16P16260 332 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 TAL2Q16559 108 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 MSRB2Q9Y3D2 182 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 USF3Q68DE3 2245 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 MYMXA0A1B0GTQ4 84 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 DUSP14O95147 198 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 C5orf64Q2M2E5 130 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 SSC4DQ8WTU2 575 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 LINC00477Q96M19 166 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 EDA2RQ9HAV5 297 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 MRPL35Q9NZE8 188 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 ZNRD1Q9P1U0 126 aa12.72□□□□□ -0.37
RBFOX1-212ENST00000550418 SAP30O75446 220 aa12.71□□□□□ -0.37
RBFOX1-212ENST00000550418 WDR86Q86TI4 376 aa12.71□□□□□ -0.37
RBFOX1-212ENST00000550418 FAM208BQ5VWN6 2430 aa12.71□□□□□ -0.37
RBFOX1-212ENST00000550418 SRRM4A7MD48 611 aaKnown RBP12.71□□□□□ -0.37
RBFOX1-212ENST00000550418 C2orf66Q6UXQ4 117 aa12.71□□□□□ -0.37
RBFOX1-212ENST00000550418 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
RBFOX1-212ENST00000550418 TRGV11A0A075B6L2 103 aa12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 TEX48A0A1B0GUV7 120 aa12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 ITLN2Q8WWU7 325 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 FXYD5Q96DB9 178 aa12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 DENND4CQ5VZ89 1909 aa12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 NPYP01303 97 aa12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 LGALS1P09382 135 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 WFDC12Q8WWY7 111 aa12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 C9orf153Q5TBE3 101 aa12.7□□□□□ -0.38
RBFOX1-212ENST00000550418 H3BMM0 161 aa12.69□□□□□ -0.38
RBFOX1-212ENST00000550418 ERCC8Q13216 396 aa12.69□□□□□ -0.38
RBFOX1-212ENST00000550418 UBE2WQ96B02 151 aa12.69□□□□□ -0.38
RBFOX1-212ENST00000550418 DKK2Q9UBU2 259 aa12.69□□□□□ -0.38
RBFOX1-212ENST00000550418 BUB1B-PAK6H3BSN5 160 aa12.69□□□□□ -0.38
RBFOX1-212ENST00000550418 NDUFS7O75251 213 aa12.69□□□□□ -0.38
RBFOX1-212ENST00000550418 SRSF8Q9BRL6 282 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-212ENST00000550418 ARFGEF3Q5TH69 2177 aa12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 HIST1H4AP62805 103 aaKnown RBP12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 WT1-ASQ06250 92 aa12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 C12orf74Q32Q52 190 aa12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 DENND4AQ7Z401 1863 aa12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 TIMM21Q9BVV7 248 aa12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 CACNA1AO00555 2505 aa12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 C15orf65H3BRN8 121 aa12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 PCP2Q8IVA1 136 aa12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 ZC2HC1AQ96GY0 325 aa12.68□□□□□ -0.38
RBFOX1-212ENST00000550418 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms