RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 MRPL53Q96EL3 112 aaKnown RBP14.1□□□□□ -0.15
DDX54-207ENST00000550016 SLC35B3Q9H1N7 401 aa14.1□□□□□ -0.15
DDX54-207ENST00000550016 AAMDCQ9H7C9 122 aa14.1□□□□□ -0.15
DDX54-207ENST00000550016 HUWE1Q7Z6Z7 4374 aaKnown RBP14.09□□□□□ -0.15
DDX54-207ENST00000550016 CDC34P49427 236 aaPredicted RBP14.09□□□□□ -0.15
DDX54-207ENST00000550016 UBE2L3P68036 154 aaKnown RBP14.09□□□□□ -0.15
DDX54-207ENST00000550016 PQLC2Q6ZP29 291 aa14.09□□□□□ -0.15
DDX54-207ENST00000550016 OR10J6PQ8NGY7 276 aa14.09□□□□□ -0.15
DDX54-207ENST00000550016 PRAC2D3DTV9 90 aa14.08□□□□□ -0.16
DDX54-207ENST00000550016 EIF3GO75821 320 aaKnown RBP eCLIP14.08□□□□□ -0.16
DDX54-207ENST00000550016 PRB4P10163 310 aaPredicted RBP14.08□□□□□ -0.16
DDX54-207ENST00000550016 AKAP14Q86UN6 197 aa14.08□□□□□ -0.16
DDX54-207ENST00000550016 EXOC3-AS1Q8N2X6 119 aa14.08□□□□□ -0.16
DDX54-207ENST00000550016 RAB24Q969Q5 203 aa14.08□□□□□ -0.16
DDX54-207ENST00000550016 KANTRA0A1W2PQU2 76 aa14.07□□□□□ -0.16
DDX54-207ENST00000550016 BCL2L11O43521 198 aa14.07□□□□□ -0.16
DDX54-207ENST00000550016 AMBPP02760 352 aa14.07□□□□□ -0.16
DDX54-207ENST00000550016 ICAM4Q14773 271 aa14.07□□□□□ -0.16
DDX54-207ENST00000550016 TMUB2Q71RG4 321 aa14.07□□□□□ -0.16
DDX54-207ENST00000550016 LYPD1Q8N2G4 141 aa14.07□□□□□ -0.16
DDX54-207ENST00000550016 PHYHIPLQ96FC7 376 aa14.07□□□□□ -0.16
DDX54-207ENST00000550016 ACTR3CQ9C0K3 210 aaPredicted RBP14.07□□□□□ -0.16
DDX54-207ENST00000550016 PPP1R14DQ9NXH3 145 aa14.07□□□□□ -0.16
DDX54-207ENST00000550016 A0A0J9YWU9 116 aa14.06□□□□□ -0.16
DDX54-207ENST00000550016 ZNF705EA8MWA4 302 aaPredicted RBP14.06□□□□□ -0.16
DDX54-207ENST00000550016 M0R3E3 92 aa14.06□□□□□ -0.16
DDX54-207ENST00000550016 HMGB3O15347 200 aaKnown RBP14.06□□□□□ -0.16
DDX54-207ENST00000550016 C1QBP02746 253 aa14.06□□□□□ -0.16
DDX54-207ENST00000550016 BOLA2-SMG1P6H3BVE0 249 aa14.05□□□□□ -0.16
DDX54-207ENST00000550016 PFDN1O60925 122 aa14.05□□□□□ -0.16
DDX54-207ENST00000550016 STAG3L2P0CL84 134 aa14.05□□□□□ -0.16
DDX54-207ENST00000550016 STAG3L3P0CL85 134 aa14.05□□□□□ -0.16
DDX54-207ENST00000550016 ARL14EPLP0DKL9 152 aa14.05□□□□□ -0.16
DDX54-207ENST00000550016 RANP62826 216 aaKnown RBP14.05□□□□□ -0.16
DDX54-207ENST00000550016 AKR1C8PQ5T2L2 129 aa14.05□□□□□ -0.16
DDX54-207ENST00000550016 MUC7Q8TAX7 377 aa14.05□□□□□ -0.16
DDX54-207ENST00000550016 ZNF471Q9BX82 626 aaPredicted RBP14.05□□□□□ -0.16
DDX54-207ENST00000550016 A0A1B0GVG6 124 aa14.04□□□□□ -0.16
DDX54-207ENST00000550016 M0R2Z0 102 aa14.04□□□□□ -0.16
DDX54-207ENST00000550016 EIF5AP63241 154 aaKnown RBP14.04□□□□□ -0.16
DDX54-207ENST00000550016 SPINK13Q1W4C9 94 aa14.04□□□□□ -0.16
DDX54-207ENST00000550016 IGF2BP2-AS1Q96M15 143 aa14.04□□□□□ -0.16
DDX54-207ENST00000550016 Q9H3A6 140 aa14.04□□□□□ -0.16
DDX54-207ENST00000550016 X6R8D5 127 aa14.04□□□□□ -0.16
DDX54-207ENST00000550016 NPIPB6E9PJ23 425 aa14.03□□□□□ -0.16
DDX54-207ENST00000550016 MIFP14174 115 aa14.03□□□□□ -0.16
DDX54-207ENST00000550016 LGALSLQ3ZCW2 172 aaPredicted RBP14.03□□□□□ -0.16
DDX54-207ENST00000550016 ZNF705AQ6ZN79 300 aaPredicted RBP14.03□□□□□ -0.16
DDX54-207ENST00000550016 HYLS1Q96M11 299 aa14.03□□□□□ -0.16
DDX54-207ENST00000550016 GOLT1BQ9Y3E0 138 aa14.03□□□□□ -0.16
DDX54-207ENST00000550016 C3orf84H3BNL1 204 aa14.02□□□□□ -0.17
DDX54-207ENST00000550016 CXorf1O96002 111 aa14.02□□□□□ -0.17
DDX54-207ENST00000550016 SEC11BP0C7V7 166 aa14.02□□□□□ -0.17
DDX54-207ENST00000550016 GCHFRP30047 84 aa14.02□□□□□ -0.17
DDX54-207ENST00000550016 CSN1S1P47710 185 aa14.02□□□□□ -0.17
DDX54-207ENST00000550016 Q8NAQ8 132 aa14.02□□□□□ -0.17
DDX54-207ENST00000550016 IL17DQ8TAD2 202 aa14.02□□□□□ -0.17
DDX54-207ENST00000550016 C11orf68Q9H3H3 251 aaKnown RBP14.02□□□□□ -0.17
DDX54-207ENST00000550016 CTXND1A0A1B0GTU2 59 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 CRXO43186 299 aaPredicted RBP14.01□□□□□ -0.17
DDX54-207ENST00000550016 CT45A10P0DMU9 189 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 TSPOP30536 169 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 ZNF726P1Q15940 193 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 SSX7Q7RTT5 188 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 C1orf158Q8N1D5 194 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 SUN5Q8TC36 379 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 LINC00477Q96M19 166 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 ODF3Q96PU9 254 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 NEU1Q99519 415 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 OTORQ9NRC9 128 aa14.01□□□□□ -0.17
DDX54-207ENST00000550016 IGHV3OR16-12A0A075B7B8 117 aa14□□□□□ -0.17
DDX54-207ENST00000550016 IGHV4-28A0A0C4DH34 117 aa14□□□□□ -0.17
DDX54-207ENST00000550016 PGPA6NDG6 321 aa14□□□□□ -0.17
DDX54-207ENST00000550016 SMIM9A6NGZ8 99 aa14□□□□□ -0.17
DDX54-207ENST00000550016 INSP01308 110 aa14□□□□□ -0.17
DDX54-207ENST00000550016 CDKN1BP46527 198 aa14□□□□□ -0.17
DDX54-207ENST00000550016 ERCC8Q13216 396 aa14□□□□□ -0.17
DDX54-207ENST00000550016 FAM74A1Q5RGS3 127 aa14□□□□□ -0.17
DDX54-207ENST00000550016 C9orf47Q6ZRZ4 202 aa14□□□□□ -0.17
DDX54-207ENST00000550016 BAP18Q8IXM2 172 aa14□□□□□ -0.17
DDX54-207ENST00000550016 RXFP4Q8TDU9 374 aa14□□□□□ -0.17
DDX54-207ENST00000550016 TRAV12-2A0A075B6T6 113 aa13.99□□□□□ -0.17
DDX54-207ENST00000550016 IGKV2-40A0A087WW87 121 aaPredicted RBP13.99□□□□□ -0.17
DDX54-207ENST00000550016 DEFB4AO15263 64 aa13.99□□□□□ -0.17
DDX54-207ENST00000550016 IGKV2D-40P01614 121 aaPredicted RBP13.99□□□□□ -0.17
DDX54-207ENST00000550016 RBMY1A1P0DJD3 496 aaKnown RBP13.99□□□□□ -0.17
DDX54-207ENST00000550016 RBMY1CP0DJD4 496 aa13.99□□□□□ -0.17
DDX54-207ENST00000550016 TPT1P13693 172 aaKnown RBP13.99□□□□□ -0.17
DDX54-207ENST00000550016 CD300CQ08708 224 aa13.99□□□□□ -0.17
DDX54-207ENST00000550016 RBMY1FQ15415 496 aaKnown RBP13.99□□□□□ -0.17
DDX54-207ENST00000550016 AGPAT4-IT1Q9H0P7 198 aa13.99□□□□□ -0.17
DDX54-207ENST00000550016 TMEM167BQ9NRX6 74 aa13.99□□□□□ -0.17
DDX54-207ENST00000550016 UMAD1C9J7I0 102 aa13.98□□□□□ -0.17
DDX54-207ENST00000550016 LEPP41159 167 aa13.98□□□□□ -0.17
DDX54-207ENST00000550016 ARL6IP6Q8N6S5 226 aa13.98□□□□□ -0.17
DDX54-207ENST00000550016 STOML3Q8TAV4 291 aa13.98□□□□□ -0.17
DDX54-207ENST00000550016 VGLL1Q99990 258 aa13.98□□□□□ -0.17
DDX54-207ENST00000550016 TMEM208Q9BTX3 173 aa13.98□□□□□ -0.17
DDX54-207ENST00000550016 PLA2G2EQ9NZK7 142 aa13.98□□□□□ -0.17
DDX54-207ENST00000550016 RBAKDNA6NC62 111 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms