RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 ZNF207O43670 478 aaKnown RBP2.73□□□□□ -1.97
APAF1-208ENST00000549007 CST7O76096 145 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 CRYGCP07315 174 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 OPRK1P41145 380 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 CAV2P51636 162 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 Q56UQ5 140 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 PPP1R1CQ8WVI7 109 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 PSENENQ9NZ42 101 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 IGHV3OR16-13A0A075B7E8 117 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 IGHV3-49A0A0A0MS15 119 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 TRBV9A0A0B4J1U6 114 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 IGHV3-74A0A0B4J1X5 117 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 IGSF23A1L1A6 192 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 I3L521 148 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 S100A9P06702 114 aaKnown RBP2.73□□□□□ -1.97
APAF1-208ENST00000549007 RND2P52198 227 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 TMUB2Q71RG4 321 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 SLC7A5P1Q8MH63 180 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 NECAP1Q8NC96 275 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 OR1P1Q8NH06 330 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 MYOZ3Q8TDC0 251 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 LINC00479Q96M42 142 aa2.73□□□□□ -1.97
APAF1-208ENST00000549007 CMYA5Q8N3K9 4069 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 TRAV14DV4A0A0A6YYC5 116 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 I3L2K1 104 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 LGALS1P09382 135 aaKnown RBP2.72□□□□□ -1.97
APAF1-208ENST00000549007 SYNJ2BPP57105 145 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 IL15RAQ13261 267 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 NDUFA11Q86Y39 141 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 CSNK1G2-AS1Q8NCQ2 148 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 OR1N2Q8NGR9 330 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 UBE2E2Q96LR5 201 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 SMIM3Q9BZL3 60 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 IGHV1OR15-1A0A075B7D0 117 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 A0A0J9YWU9 116 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 YIF1AO95070 293 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 PRB2P02812 416 aaPredicted RBP2.72□□□□□ -1.97
APAF1-208ENST00000549007 STAG3L2P0CL84 134 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 SLC25A6P12236 298 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 GATA2P23769 480 aaPredicted RBP2.72□□□□□ -1.97
APAF1-208ENST00000549007 HTR2BP41595 481 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 OR2F1Q13607 317 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 BSXQ3C1V8 233 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 PRSS54Q6PEW0 395 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 SLC16A13Q7RTY0 426 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 TYMSOSQ8TAI1 123 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 C4orf3Q8WVX3 66 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 DCUN1D4Q92564 292 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 ZNF436Q9C0F3 470 aaPredicted RBP2.72□□□□□ -1.97
APAF1-208ENST00000549007 C21orf62Q9NYP8 219 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 FXYD6-FXYD2A0A087WZ82 144 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 IGHV3-66A0A0C4DH42 116 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 FAM223BA6NKX1 122 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 MED6O75586 246 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 MPC2O95563 127 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 BMI1P35226 326 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 NKX2-5P52952 324 aaPredicted RBP2.72□□□□□ -1.97
APAF1-208ENST00000549007 AP2S1P53680 142 aaPredicted RBP2.72□□□□□ -1.97
APAF1-208ENST00000549007 ZNF616Q08AN1 781 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 CLINT1Q14677 625 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 C2orf83Q53S99 150 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 UNQ9165/PRO28630Q6UXU0 137 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 FAM223AQ8IWN6 122 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 TCTE3Q8IZS6 198 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 OR2T35Q8NGX2 323 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 EEF1AKMT3Q96AZ1 226 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 C11orf1Q9H5F2 150 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 PEF1Q9UBV8 284 aaKnown RBP2.72□□□□□ -1.97
APAF1-208ENST00000549007 RFNGQ9Y644 331 aa2.72□□□□□ -1.97
APAF1-208ENST00000549007 LINC01619G3V211 115 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 H3BUA1 57 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 GNG7O60262 68 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 DEDDO75618 318 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 GATA1P15976 413 aaPredicted RBP2.71□□□□□ -1.98
APAF1-208ENST00000549007 SUB1P53999 127 aaKnown RBP eCLIP2.71□□□□□ -1.98
APAF1-208ENST00000549007 ZNF90Q03938 601 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 AKR1C1Q04828 323 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 RPEL1Q2QD12 228 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 LCN12Q6JVE5 192 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 HSD17B13Q7Z5P4 300 aaPredicted RBP2.71□□□□□ -1.98
APAF1-208ENST00000549007 ZNF414Q96IQ9 312 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 USMG5Q96IX5 58 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 SMIM8Q96KF7 97 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 NMES1Q9C002 83 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 CLEC5AQ9NY25 188 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 U3KQ87 197 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 IGKV1OR2-108A0A075B7D4 117 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.71□□□□□ -1.98
APAF1-208ENST00000549007 KRTAP16-1A8MUX0 517 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 G3V3Q6 166 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 TGOLN2O43493 480 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 EIF3GO75821 320 aaKnown RBP eCLIP2.71□□□□□ -1.98
APAF1-208ENST00000549007 CTSGP08311 255 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 PRB4P10163 310 aaPredicted RBP2.71□□□□□ -1.98
APAF1-208ENST00000549007 HIST1H1BP16401 226 aaKnown RBP2.71□□□□□ -1.98
APAF1-208ENST00000549007 PMCHP20382 165 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 SLC38A11Q08AI6 406 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 KRTAP21-3Q3LHN1 58 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 TMEM14EPQ6UXP3 125 aa2.71□□□□□ -1.98
APAF1-208ENST00000549007 TMEM252Q8N6L7 170 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms