RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 H7BYZ3 331 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 SLC17A3O00476 420 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 ATP5G1P05496 136 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 HTN1P15515 57 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 S100A11P31949 105 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 RPL29P47914 159 aaKnown RBP10.11□□□□□ -0.79
COL2A1-209ENST00000546974 ATP5G3P48201 142 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 SULT1A1P50225 295 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 IL15RAQ13261 267 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 GUK1Q16774 197 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 MIC13Q5XKP0 118 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 LINC00299Q6ZSB3 139 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 RNASE8Q8TDE3 154 aaKnown RBP10.11□□□□□ -0.79
COL2A1-209ENST00000546974 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
COL2A1-209ENST00000546974 PFDN5Q99471 154 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 KRTAP17-1Q9BYP8 105 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 LYRM2Q9NU23 88 aaPredicted RBP10.11□□□□□ -0.79
COL2A1-209ENST00000546974 PTTG2Q9NZH5 202 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 RYR1P21817 5038 aa10.1□□□□□ -0.79
COL2A1-209ENST00000546974 FAM240BA0A1B0GVZ2 78 aa10.1□□□□□ -0.79
COL2A1-209ENST00000546974 H3BTX0 84 aa10.1□□□□□ -0.79
COL2A1-209ENST00000546974 SOHLH1Q5JUK2 328 aa10.1□□□□□ -0.79
COL2A1-209ENST00000546974 TMEM252Q8N6L7 170 aa10.1□□□□□ -0.79
COL2A1-209ENST00000546974 CHAC2Q8WUX2 184 aa10.1□□□□□ -0.79
COL2A1-209ENST00000546974 ATG101Q9BSB4 218 aa10.1□□□□□ -0.79
COL2A1-209ENST00000546974 TRAV5A0A0B4J249 113 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 ZNF253O75346 499 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 S100A10P60903 97 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 HBG1P69891 147 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 HBG2P69892 147 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 BAXQ07812 192 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 RAB32Q13637 225 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 KIR3DS1Q14943 382 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 ATP6V1FQ16864 119 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 STX12Q86Y82 276 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 ODF3Q96PU9 254 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 NOP10Q9NPE3 64 aaKnown RBP10.09□□□□□ -0.79
COL2A1-209ENST00000546974 SLC39A9Q9NUM3 307 aa10.09□□□□□ -0.79
COL2A1-209ENST00000546974 UBE2L5PA0A1B0GUS4 154 aa10.08□□□□□ -0.8
COL2A1-209ENST00000546974 IGSF23A1L1A6 192 aa10.08□□□□□ -0.8
COL2A1-209ENST00000546974 NUDT3O95989 172 aa10.08□□□□□ -0.8
COL2A1-209ENST00000546974 C1orf134Q5TEV5 83 aa10.08□□□□□ -0.8
COL2A1-209ENST00000546974 GFI1BQ5VTD9 330 aa10.08□□□□□ -0.8
COL2A1-209ENST00000546974 MZT2BQ6NZ67 158 aa10.08□□□□□ -0.8
COL2A1-209ENST00000546974 CCDC28AQ8IWP9 274 aa10.08□□□□□ -0.8
COL2A1-209ENST00000546974 MRPL53Q96EL3 112 aaKnown RBP10.08□□□□□ -0.8
COL2A1-209ENST00000546974 PARD6GQ9BYG4 376 aaPredicted RBP10.08□□□□□ -0.8
COL2A1-209ENST00000546974 ZNF586Q9NXT0 402 aa10.08□□□□□ -0.8
COL2A1-209ENST00000546974 MUC4Q99102 2169 aa10.08□□□□□ -0.8
COL2A1-209ENST00000546974 LRP1BQ9NZR2 4599 aa10.07□□□□□ -0.8
COL2A1-209ENST00000546974 NPIPB6E9PJ23 425 aa10.07□□□□□ -0.8
COL2A1-209ENST00000546974 CT45A10P0DMU9 189 aa10.07□□□□□ -0.8
COL2A1-209ENST00000546974 MED14OSP0DP75 135 aa10.07□□□□□ -0.8
COL2A1-209ENST00000546974 FGF7P21781 194 aa10.07□□□□□ -0.8
COL2A1-209ENST00000546974 LEPP41159 167 aa10.07□□□□□ -0.8
COL2A1-209ENST00000546974 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
COL2A1-209ENST00000546974 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
COL2A1-209ENST00000546974 TRBV19A0A075B6N1 114 aa10.06□□□□□ -0.8
COL2A1-209ENST00000546974 MPDU1O75352 247 aa10.06□□□□□ -0.8
COL2A1-209ENST00000546974 CCL18P55774 89 aa10.06□□□□□ -0.8
COL2A1-209ENST00000546974 ASAH1Q13510 395 aa10.06□□□□□ -0.8
COL2A1-209ENST00000546974 ZNRF2Q8NHG8 242 aa10.06□□□□□ -0.8
COL2A1-209ENST00000546974 RNF141Q8WVD5 230 aa10.06□□□□□ -0.8
COL2A1-209ENST00000546974 S100ZQ8WXG8 99 aa10.06□□□□□ -0.8
COL2A1-209ENST00000546974 GPN1Q9HCN4 374 aaPredicted RBP10.06□□□□□ -0.8
COL2A1-209ENST00000546974 PRELID1Q9Y255 219 aa10.06□□□□□ -0.8
COL2A1-209ENST00000546974 HIST1H1EP10412 219 aaKnown RBP10.05□□□□□ -0.8
COL2A1-209ENST00000546974 PDE6HQ13956 83 aa10.05□□□□□ -0.8
COL2A1-209ENST00000546974 PYGO2Q9BRQ0 406 aa10.05□□□□□ -0.8
COL2A1-209ENST00000546974 HSPG2P98160 4391 aa10.05□□□□□ -0.8
COL2A1-209ENST00000546974 TRAV12-3A0A0B4J271 114 aa10.04□□□□□ -0.8
COL2A1-209ENST00000546974 NBDYA0A0U1RRE5 68 aa10.04□□□□□ -0.8
COL2A1-209ENST00000546974 SNURFLB1AK76 121 aa10.04□□□□□ -0.8
COL2A1-209ENST00000546974 J3KRW8 73 aa10.04□□□□□ -0.8
COL2A1-209ENST00000546974 NDUFB4O95168 129 aa10.04□□□□□ -0.8
COL2A1-209ENST00000546974 RLN2P04090 185 aa10.04□□□□□ -0.8
COL2A1-209ENST00000546974 SLC25A5P05141 298 aaKnown RBP10.04□□□□□ -0.8
COL2A1-209ENST00000546974 NPCDR1Q9BY65 106 aa10.04□□□□□ -0.8
COL2A1-209ENST00000546974 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
COL2A1-209ENST00000546974 GAGE12BA1L429 117 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 M0R3E3 92 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 GAGE7O76087 117 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 GAGE12FP0CL80 117 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 GAGE12GP0CL81 117 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 GAGE12IP0CL82 117 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 NHLH2Q02577 135 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 OR5I1Q13606 314 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 CLINT1Q14677 625 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 ZNF503Q96F45 646 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 LINC00477Q96M19 166 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 NMES1Q9C002 83 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 SLC25A31Q9H0C2 315 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 TIMM9Q9Y5J7 89 aa10.03□□□□□ -0.8
COL2A1-209ENST00000546974 E5RGE8 158 aa10.02□□□□□ -0.81
COL2A1-209ENST00000546974 PYYP10082 97 aa10.02□□□□□ -0.81
COL2A1-209ENST00000546974 M6PRP20645 277 aa10.02□□□□□ -0.81
COL2A1-209ENST00000546974 DAZ2Q13117 558 aaKnown RBP10.02□□□□□ -0.81
COL2A1-209ENST00000546974 ERCC8Q13216 396 aa10.02□□□□□ -0.81
COL2A1-209ENST00000546974 GCSAMLQ5JQS6 135 aa10.02□□□□□ -0.81
COL2A1-209ENST00000546974 OR5C1Q8NGR4 320 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms