RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 HIGD1CA8MV81 97 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 OVOL3O00110 214 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 MGST1P10620 155 aaKnown RBP3.67□□□□□ -1.82
CNGA1-209ENST00000544810 ATP5IP56385 69 aaPredicted RBP3.67□□□□□ -1.82
CNGA1-209ENST00000544810 ERVK11-1P61568 191 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 SUMO2P61956 95 aaKnown RBP3.67□□□□□ -1.82
CNGA1-209ENST00000544810 FOXF2Q12947 444 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 GUSBP1Q15486 140 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 TAL2Q16559 108 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 LINC00173Q6ZV60 143 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 FADS6Q8N9I5 356 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 C9orf106Q8NAJ2 232 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 NEU4Q8WWR8 484 aaPredicted RBP3.67□□□□□ -1.82
CNGA1-209ENST00000544810 HSD17B10Q99714 261 aaKnown RBP3.67□□□□□ -1.82
CNGA1-209ENST00000544810 TM2D2Q9BX73 214 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 ZNF492Q9P255 531 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 CR1P17927 2039 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 A0A1B0GW15 77 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 A8MWL6 223 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 GGTLC3B5MD39 225 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 CA1P00915 261 aaPredicted RBP3.67□□□□□ -1.82
CNGA1-209ENST00000544810 IGHV4-39P01824 125 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 TNFRSF1AP19438 455 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 DUTP33316 252 aaKnown RBP3.67□□□□□ -1.82
CNGA1-209ENST00000544810 PSG5Q15238 335 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 ZC2HC1AQ96GY0 325 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 PRSS22Q9GZN4 317 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 INSIG2Q9Y5U4 225 aa3.67□□□□□ -1.82
CNGA1-209ENST00000544810 PKD1L1Q8TDX9 2849 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 H3BMG7 143 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 RFPL3SP0C7P2 107 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 IGHV4-31P0DP07 118 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 CCL3P10147 92 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 FCGR2BP31994 310 aaPredicted RBP3.66□□□□□ -1.82
CNGA1-209ENST00000544810 LOXL1Q08397 574 aaPredicted RBP3.66□□□□□ -1.82
CNGA1-209ENST00000544810 SPATA31B1PQ5VZV4 182 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 RBPMS2Q6ZRY4 209 aaKnown RBP3.66□□□□□ -1.82
CNGA1-209ENST00000544810 Q8IYB0 196 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 OR2H1Q9GZK4 316 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 PLEKHA3Q9HB20 300 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 ZNF355PQ9NSJ1 428 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 PRO0461Q9UI25 63 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 ABCA1O95477 2261 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 IGHV4-30-2A0A087WSY4 118 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 SRRM4A7MD48 611 aaKnown RBP3.66□□□□□ -1.82
CNGA1-209ENST00000544810 LINC01619G3V211 115 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 MGST3O14880 152 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 SS18L1O75177 396 aaPredicted RBP3.66□□□□□ -1.82
CNGA1-209ENST00000544810 FOXH1O75593 365 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 SPINK8P0C7L1 97 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 ZNF32P17041 273 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 FOXA3P55318 350 aaPredicted RBP3.66□□□□□ -1.82
CNGA1-209ENST00000544810 BRWD1-AS2P59051 145 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 RPL30P62888 115 aaKnown RBP3.66□□□□□ -1.82
CNGA1-209ENST00000544810 FAM27E3Q08E93 113 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 MLANAQ16655 118 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 MIR17HGQ75NE6 70 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 IL1F10Q8WWZ1 152 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 FAM168AQ92567 244 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 ZNF503Q96F45 646 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 COQ2Q96H96 371 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 RPP21Q9H633 154 aaKnown RBP3.66□□□□□ -1.82
CNGA1-209ENST00000544810 KLF12Q9Y4X4 402 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 MPC1Q9Y5U8 109 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 MED12LQ86YW9 2145 aa3.66□□□□□ -1.82
CNGA1-209ENST00000544810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.66□□□□□ -1.82
CNGA1-209ENST00000544810 ZNF407Q9C0G0 2248 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.65□□□□□ -1.82
CNGA1-209ENST00000544810 ZNF716A6NP11 495 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 PLAUP00749 431 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 C8orf88P0DMB2 117 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 SRYQ05066 204 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 ZNF816Q0VGE8 651 aaPredicted RBP3.65□□□□□ -1.82
CNGA1-209ENST00000544810 FOXI1Q12951 378 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 FOXE3Q13461 319 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 WFDC2Q14508 124 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 RAB37Q96AX2 223 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 RNF183Q96D59 192 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 NABP2Q9BQ15 211 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 C1QTNF4Q9BXJ3 329 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 FGF23Q9GZV9 251 aaPredicted RBP3.65□□□□□ -1.82
CNGA1-209ENST00000544810 HILPDAQ9Y5L2 63 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 NOTCH1P46531 2555 aa3.65□□□□□ -1.82
CNGA1-209ENST00000544810 TMEM89A2RUT3 159 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 C17orf98A8MV24 154 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 NPIPB6E9PJ23 425 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 PEX7O00628 323 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 NDUFS7O75251 213 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 TCTAP57738 103 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 HERV-K104P63124 156 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 GNG3P63215 75 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 Q6ZUT4 128 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 DTX2Q86UW9 622 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 RITA1Q96K30 269 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 ANAPC13Q9BS18 74 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 SPXQ9BT56 116 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 SSBP3Q9BWW4 388 aaPredicted RBP3.65□□□□□ -1.83
CNGA1-209ENST00000544810 DNAJC13O75165 2243 aa3.65□□□□□ -1.83
CNGA1-209ENST00000544810 A0A1B0GWB2 263 aa3.64□□□□□ -1.83
CNGA1-209ENST00000544810 TCRBV4S1A1TA0A5B7 111 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms