RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 Q9UFV3 132 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 JPT1Q9UK76 154 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 FOXA2Q9Y261 457 aaPredicted RBP4.22□□□□□ -1.73
PROM1-220ENST00000540805 HIGD1CA8MV81 97 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 HLA-DRB1P01911 266 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 HIST1H1EP10412 219 aaKnown RBP4.22□□□□□ -1.73
PROM1-220ENST00000540805 ID1P41134 155 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 FAM120AOSQ5T036 256 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 CLEC19AQ6UXS0 136 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 CHCHD1Q96BP2 118 aaKnown RBP4.22□□□□□ -1.73
PROM1-220ENST00000540805 MRPL32Q9BYC8 188 aaKnown RBP4.22□□□□□ -1.73
PROM1-220ENST00000540805 SCRT2Q9NQ03 307 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 DSCAML1Q8TD84 2053 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 IGHV1-18A0A0C4DH31 117 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 LOC389332A0A1B0GUA5 103 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 THBDP07204 575 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 HBBP68871 147 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 PET117Q6UWS5 81 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 LCNL1Q6ZST4 164 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 OR4X2Q8NGF9 303 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 OR10J6PQ8NGY7 276 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 GLMPQ8WWB7 406 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 URB1-AS1Q96HZ7 61 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 KLK15Q9H2R5 256 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 IGHV1-24A0A0C4DH33 117 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 J3QKU1 62 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 PEX7O00628 323 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 KLRD1Q13241 179 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 GUSBP1Q15486 140 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 Q6ZS92 163 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 SLC25A33Q9BSK2 321 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 MAP1LC3CQ9BXW4 147 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 MS4A6AQ9H2W1 248 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 TMEM14BQ9NUH8 114 aa4.21□□□□□ -1.73
PROM1-220ENST00000540805 A0A1B0GXF2 115 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 K7ENP7 123 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 K7ERJ3 54 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 UFSP1Q6NVU6 142 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 IGFL2Q6UWQ7 119 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 BPIFA4PQ86YQ2 179 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 C11orf53Q8IXP5 236 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 TEX29Q8N6K0 151 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 MRPL20Q9BYC9 149 aaKnown RBP4.21□□□□□ -1.74
PROM1-220ENST00000540805 TTTY13Q9BZ97 58 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 BPESC1Q9GZL8 116 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 IFI27L2Q9H2X8 130 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 HRNRQ86YZ3 2850 aaPredicted RBP4.21□□□□□ -1.74
PROM1-220ENST00000540805 PSMB11A5LHX3 300 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 MYOD1P15172 320 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 CFHR2P36980 270 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 DLX1P56177 255 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 HERV-K104P63124 156 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 WFDC2Q14508 124 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 IGF2-ASQ6U949 168 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 C3orf56Q8N813 242 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 NPFFR1Q9GZQ6 430 aa4.21□□□□□ -1.74
PROM1-220ENST00000540805 IGKV1OR2-108A0A075B7D4 117 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 IGHV1-46P01743 117 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 KLF17Q5JT82 389 aaPredicted RBP4.2□□□□□ -1.74
PROM1-220ENST00000540805 C10orf55Q5SWW7 151 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 GTF2H5Q6ZYL4 71 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 FAM90A1Q86YD7 464 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 SLC25A2Q9BXI2 301 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 TRAV5A0A0B4J249 113 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 TMEM262E9PQX1 116 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 H3BUX3 64 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 NCR2O95944 276 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 ZNF474Q6S9Z5 364 aaPredicted RBP4.2□□□□□ -1.74
PROM1-220ENST00000540805 C2orf91Q6ZV80 131 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 TCF24Q7RTU0 167 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 PPP1R27Q86WC6 154 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 CD177Q8N6Q3 437 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 RAX2Q96IS3 184 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 SIGMAR1Q99720 223 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 GEMIN7Q9H840 131 aaKnown RBP4.2□□□□□ -1.74
PROM1-220ENST00000540805 HSPB8Q9UJY1 196 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 F11RQ9Y624 299 aaKnown RBP4.2□□□□□ -1.74
PROM1-220ENST00000540805 SOX21Q9Y651 276 aaPredicted RBP4.2□□□□□ -1.74
PROM1-220ENST00000540805 K7EM74 188 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 TIMM23O14925 209 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 SCGB1C2P0DMR2 95 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 PYYP10082 97 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 SEC11AP67812 179 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 PRCDQ00LT1 54 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 AMTNQ6UX39 209 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 GOLT1AQ6ZVE7 132 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 NEGR1Q7Z3B1 354 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 FAM167A-AS1Q96KT0 104 aa4.2□□□□□ -1.74
PROM1-220ENST00000540805 KBTBD11-OT1A0A1B0GTJ5 212 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 A0A1B0GV72 72 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 GAGE12HA6NDE8 117 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 TMEM8BA6NDV4 472 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 A8MWL6 223 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 ZNF134P52741 427 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 C2orf83Q53S99 150 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 MORN5Q5VZ52 161 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 MBNL2Q5VZF2 373 aaKnown RBP4.19□□□□□ -1.74
PROM1-220ENST00000540805 CACNG8Q8WXS5 425 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 ARPC1AQ92747 370 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 RPP21Q9H633 154 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms