RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 C7orf66A4D0T2 115 aa13.77□□□□□ -0.21
TNFRSF1B-204ENST00000536782 SNRPCP09234 159 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1B-204ENST00000536782 ARL16Q0P5N6 197 aa13.77□□□□□ -0.21
TNFRSF1B-204ENST00000536782 RNASE8Q8TDE3 154 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1B-204ENST00000536782 RNF141Q8WVD5 230 aa13.77□□□□□ -0.21
TNFRSF1B-204ENST00000536782 C20orf144Q9BQM9 153 aa13.77□□□□□ -0.21
TNFRSF1B-204ENST00000536782 NOP10Q9NPE3 64 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1B-204ENST00000536782 L7N2F9 121 aa13.76□□□□□ -0.21
TNFRSF1B-204ENST00000536782 COX7A2P2O60397 106 aa13.76□□□□□ -0.21
TNFRSF1B-204ENST00000536782 VAMP2P63027 116 aa13.76□□□□□ -0.21
TNFRSF1B-204ENST00000536782 C6orf223Q8N319 242 aa13.76□□□□□ -0.21
TNFRSF1B-204ENST00000536782 LINC00588Q9Y4M8 146 aa13.76□□□□□ -0.21
TNFRSF1B-204ENST00000536782 INMT-MINDY4F8WBC2 141 aa13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 TNP2Q05952 138 aa13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 IL15RAQ13261 267 aa13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 CLINT1Q14677 625 aa13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 C10orf113Q5VZT2 155 aa13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 OR10J6PQ8NGY7 276 aa13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 TMEM37Q8WXS4 190 aa13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 MGST2Q99735 147 aa13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 MARVELD1Q9BSK0 173 aa13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 LSM5Q9Y4Y9 91 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1B-204ENST00000536782 PVALBP20472 110 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1B-204ENST00000536782 KIR3DS1Q14943 382 aa13.74□□□□□ -0.21
TNFRSF1B-204ENST00000536782 CCDC28AQ8IWP9 274 aa13.74□□□□□ -0.21
TNFRSF1B-204ENST00000536782 C11orf1Q9H5F2 150 aa13.74□□□□□ -0.21
TNFRSF1B-204ENST00000536782 PXMP4Q9Y6I8 212 aa13.74□□□□□ -0.21
TNFRSF1B-204ENST00000536782 PRAC2D3DTV9 90 aa13.73□□□□□ -0.21
TNFRSF1B-204ENST00000536782 H3BTX0 84 aa13.73□□□□□ -0.21
TNFRSF1B-204ENST00000536782 SLC17A3O00476 420 aa13.73□□□□□ -0.21
TNFRSF1B-204ENST00000536782 OR5I1Q13606 314 aa13.73□□□□□ -0.21
TNFRSF1B-204ENST00000536782 OPCMLQ14982 345 aa13.73□□□□□ -0.21
TNFRSF1B-204ENST00000536782 MORN5Q5VZ52 161 aa13.73□□□□□ -0.21
TNFRSF1B-204ENST00000536782 SSX7Q7RTT5 188 aa13.73□□□□□ -0.21
TNFRSF1B-204ENST00000536782 PARD6GQ9BYG4 376 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1B-204ENST00000536782 C16orf90A8MZG2 172 aa13.72□□□□□ -0.21
TNFRSF1B-204ENST00000536782 IGLC2P0DOY2 106 aa13.72□□□□□ -0.21
TNFRSF1B-204ENST00000536782 CAMLGP49069 296 aa13.72□□□□□ -0.21
TNFRSF1B-204ENST00000536782 RAB31Q13636 194 aa13.72□□□□□ -0.21
TNFRSF1B-204ENST00000536782 GFI1BQ5VTD9 330 aa13.72□□□□□ -0.21
TNFRSF1B-204ENST00000536782 Q6ZRG5 221 aa13.72□□□□□ -0.21
TNFRSF1B-204ENST00000536782 GNPNAT1Q96EK6 184 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1B-204ENST00000536782 DNAJC4Q9NNZ3 241 aa13.72□□□□□ -0.21
TNFRSF1B-204ENST00000536782 H3BQ15 152 aa13.71□□□□□ -0.21
TNFRSF1B-204ENST00000536782 BCAP31P51572 246 aa13.71□□□□□ -0.21
TNFRSF1B-204ENST00000536782 CAV2P51636 162 aa13.71□□□□□ -0.21
TNFRSF1B-204ENST00000536782 S100A10P60903 97 aa13.71□□□□□ -0.21
TNFRSF1B-204ENST00000536782 RAB32Q13637 225 aa13.71□□□□□ -0.21
TNFRSF1B-204ENST00000536782 LINC00612Q8N6U2 182 aa13.71□□□□□ -0.21
TNFRSF1B-204ENST00000536782 SAT2Q96F10 170 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1B-204ENST00000536782 LYRM2Q9NU23 88 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1B-204ENST00000536782 TRAV26-1A0A087WT03 109 aa13.7□□□□□ -0.22
TNFRSF1B-204ENST00000536782 SNURFLB1AK76 121 aa13.7□□□□□ -0.22
TNFRSF1B-204ENST00000536782 RLN2P04090 185 aa13.7□□□□□ -0.22
TNFRSF1B-204ENST00000536782 M6PRP20645 277 aa13.7□□□□□ -0.22
TNFRSF1B-204ENST00000536782 GUK1Q16774 197 aa13.7□□□□□ -0.22
TNFRSF1B-204ENST00000536782 ZNF503Q96F45 646 aa13.7□□□□□ -0.22
TNFRSF1B-204ENST00000536782 NMES1Q9C002 83 aa13.7□□□□□ -0.22
TNFRSF1B-204ENST00000536782 Q9H8V8 135 aa13.7□□□□□ -0.22
TNFRSF1B-204ENST00000536782 APOBP04114 4563 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1B-204ENST00000536782 J3KRW8 73 aa13.69□□□□□ -0.22
TNFRSF1B-204ENST00000536782 LEPP41159 167 aa13.69□□□□□ -0.22
TNFRSF1B-204ENST00000536782 CYCSP99999 105 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1B-204ENST00000536782 MIC13Q5XKP0 118 aa13.69□□□□□ -0.22
TNFRSF1B-204ENST00000536782 OR1L4Q8NGR5 311 aa13.69□□□□□ -0.22
TNFRSF1B-204ENST00000536782 RXFP4Q8TDU9 374 aa13.69□□□□□ -0.22
TNFRSF1B-204ENST00000536782 ODF3Q96PU9 254 aa13.69□□□□□ -0.22
TNFRSF1B-204ENST00000536782 TRAV5A0A0B4J249 113 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 TRAV12-3A0A0B4J271 114 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 GAGE12BA1L429 117 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 FAM24AA6NFZ4 105 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 GAGE7O76087 117 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 CST7O76096 145 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 GAGE12FP0CL80 117 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 GAGE12GP0CL81 117 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 GAGE12IP0CL82 117 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 CT45A10P0DMU9 189 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 SULT1A1P50225 295 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 STX12Q86Y82 276 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 PFDN5Q99471 154 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 UQCC1Q9NVA1 299 aa13.68□□□□□ -0.22
TNFRSF1B-204ENST00000536782 A0A0J9YY99 117 aa13.67□□□□□ -0.22
TNFRSF1B-204ENST00000536782 NPIPB6E9PJ23 425 aa13.67□□□□□ -0.22
TNFRSF1B-204ENST00000536782 CDK2AP2O75956 126 aa13.67□□□□□ -0.22
TNFRSF1B-204ENST00000536782 HOXA5P20719 270 aa13.67□□□□□ -0.22
TNFRSF1B-204ENST00000536782 TTC32Q5I0X7 151 aa13.67□□□□□ -0.22
TNFRSF1B-204ENST00000536782 TMEM252Q8N6L7 170 aa13.67□□□□□ -0.22
TNFRSF1B-204ENST00000536782 PYGO2Q9BRQ0 406 aa13.67□□□□□ -0.22
TNFRSF1B-204ENST00000536782 WDR83OSQ9Y284 106 aa13.67□□□□□ -0.22
TNFRSF1B-204ENST00000536782 S100A11P31949 105 aa13.66□□□□□ -0.22
TNFRSF1B-204ENST00000536782 HBG1P69891 147 aa13.66□□□□□ -0.22
TNFRSF1B-204ENST00000536782 HBG2P69892 147 aa13.66□□□□□ -0.22
TNFRSF1B-204ENST00000536782 VWC2Q2TAL6 325 aa13.66□□□□□ -0.22
TNFRSF1B-204ENST00000536782 ZNF586Q9NXT0 402 aa13.66□□□□□ -0.22
TNFRSF1B-204ENST00000536782 IGSF23A1L1A6 192 aa13.65□□□□□ -0.22
TNFRSF1B-204ENST00000536782 H3BNG1 76 aa13.65□□□□□ -0.22
TNFRSF1B-204ENST00000536782 ZNF253O75346 499 aa13.65□□□□□ -0.22
TNFRSF1B-204ENST00000536782 SIX6O95475 246 aa13.65□□□□□ -0.22
TNFRSF1B-204ENST00000536782 RPL29P47914 159 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1B-204ENST00000536782 SLC39A9Q9NUM3 307 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms