RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 Q6ZQT7 251 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 STPG4Q8N801 248 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 SLC24A4Q8NFF2 622 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 OR8A1Q8NGG7 326 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 OR56B1Q8NGI3 324 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 LRRC20Q8TCA0 184 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 CMTM5Q96DZ9 223 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 TSC22D3Q99576 134 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 SLC29A1Q99808 456 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 PARD6GQ9BYG4 376 aaPredicted RBP2.33□□□□□ -2.04
YBX3-205ENST00000536107 CTDSP1Q9GZU7 261 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 LPAR5Q9H1C0 372 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 OR51M1Q9H341 326 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 SLC25A22Q9H936 323 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 ENY2Q9NPA8 101 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 COMMD9Q9P000 198 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 HSPB7Q9UBY9 170 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 KLK12Q9UKR0 248 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 IGLV1-50A0A075B6I6 118 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.32□□□□□ -2.04
YBX3-205ENST00000536107 MUC21A0A0G2JKD1 596 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 SNTNA6NMZ2 147 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 J3QRE1 110 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 OR10J4P0C629 311 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 IGLC1P0CG04 106 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 SMIM18P0DKX4 95 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 PSMB9P28065 219 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 HRH1P35367 487 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 RPL13AP40429 203 aaKnown RBP2.32□□□□□ -2.04
YBX3-205ENST00000536107 LPAR6P43657 344 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 DAPP51397 102 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 OR10A3P58181 314 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 HSPE1P61604 102 aaKnown RBP2.32□□□□□ -2.04
YBX3-205ENST00000536107 LYZP61626 148 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 GAGE1Q13065 139 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 GAGE4Q13068 117 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 P2RY14Q15391 338 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 ZNF674Q2M3X9 581 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 CST9LP1Q5W188 147 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 OR8G2PQ6IF36 304 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 LINC00337Q8N6G1 96 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 ARL6IP6Q8N6S5 226 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 SLC35G3Q8N808 338 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 FER1L6-AS1Q8NA97 138 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 SLC25A38Q96DW6 304 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 RAB3CQ96E17 227 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 ACY3Q96HD9 319 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 RETNLBQ9BQ08 111 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 SLC5A7Q9GZV3 580 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 SH3BGRL3Q9H299 93 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 PRR34Q9NV39 138 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 PAM16Q9Y3D7 125 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 TMEM56-RWDD3S4R434 201 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
YBX3-205ENST00000536107 IGLV7-46A0A075B6I9 117 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 IGKV1D-8A0A087WSZ0 117 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 IGHV3-16A0A0C4DH30 117 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 TRBV5-5A0A0J9YX44 114 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 PGPA6NDG6 321 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 ERICH4A6NGS2 130 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 PMS2P5A8MQ11 134 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 CTDSP2O14595 271 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 EDF1O60869 148 aaKnown RBP2.31□□□□□ -2.04
YBX3-205ENST00000536107 GATA1P15976 413 aaPredicted RBP2.31□□□□□ -2.04
YBX3-205ENST00000536107 TCL1AP56279 114 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 FXYD4P59646 89 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 ELOBQ15370 118 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 TPRXLQ17RH7 258 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 CCDC58Q4VC31 144 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 XAF1Q6GPH4 301 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 PRSS54Q6PEW0 395 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 H2BFWTQ7Z2G1 175 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 IQCF2Q8IXL9 164 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 FAM89BQ8N5H3 189 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 EIF4E3Q8N5X7 224 aaKnown RBP2.31□□□□□ -2.04
YBX3-205ENST00000536107 C11orf72Q8NBR9 251 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 OR4C5Q8NGB2 326 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 OR52I2Q8NH67 350 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 TRUB1Q8WWH5 349 aaKnown RBP2.31□□□□□ -2.04
YBX3-205ENST00000536107 DIRC1Q969H9 104 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 SMIM19Q96E16 107 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 SAT2Q96F10 170 aaPredicted RBP2.31□□□□□ -2.04
YBX3-205ENST00000536107 PDCD10Q9BUL8 212 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 GTSF1LQ9H1H1 148 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 PLGRKTQ9HBL7 147 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 LINC00846Q9NV44 126 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 PRO0461Q9UI25 63 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 TP53TG3Q9ULZ0 132 aa2.31□□□□□ -2.04
YBX3-205ENST00000536107 IGHV1OR15-1A0A075B7D0 117 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 A0A087WX48 190 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 TRAV8-2A0A0B4J237 113 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 PNMA8CA0A1B0GUJ8 204 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 ZFP92A6NM28 416 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 WBP4O75554 376 aaKnown RBP2.3□□□□□ -2.04
YBX3-205ENST00000536107 CRPP02741 224 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 MT-ND6P03923 174 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 TCRBP04435 133 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 RLN1P04808 185 aa2.3□□□□□ -2.04
YBX3-205ENST00000536107 SLC25A4P12235 298 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms