RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 PVALBP20472 110 aaPredicted RBP12.5□□□□□ -0.41
PCF11-206ENST00000533018 S100A10P60903 97 aa12.5□□□□□ -0.41
PCF11-206ENST00000533018 CLINT1Q14677 625 aa12.5□□□□□ -0.41
PCF11-206ENST00000533018 KIR3DS1Q14943 382 aa12.5□□□□□ -0.41
PCF11-206ENST00000533018 MIC13Q5XKP0 118 aa12.5□□□□□ -0.41
PCF11-206ENST00000533018 OR1L4Q8NGR5 311 aa12.5□□□□□ -0.41
PCF11-206ENST00000533018 ZNF431Q8TF32 576 aaPredicted RBP12.5□□□□□ -0.41
PCF11-206ENST00000533018 PXMP4Q9Y6I8 212 aa12.5□□□□□ -0.41
PCF11-206ENST00000533018 TRAV5A0A0B4J249 113 aa12.49□□□□□ -0.41
PCF11-206ENST00000533018 OR5I1Q13606 314 aa12.49□□□□□ -0.41
PCF11-206ENST00000533018 RNASE8Q8TDE3 154 aaKnown RBP12.49□□□□□ -0.41
PCF11-206ENST00000533018 C20orf144Q9BQM9 153 aa12.49□□□□□ -0.41
PCF11-206ENST00000533018 NUDT15Q9NV35 164 aa12.49□□□□□ -0.41
PCF11-206ENST00000533018 UQCC1Q9NVA1 299 aa12.49□□□□□ -0.41
PCF11-206ENST00000533018 H3BQ15 152 aa12.48□□□□□ -0.41
PCF11-206ENST00000533018 IGLC2P0DOY2 106 aa12.48□□□□□ -0.41
PCF11-206ENST00000533018 BAXQ07812 192 aa12.48□□□□□ -0.41
PCF11-206ENST00000533018 GFI1BQ5VTD9 330 aa12.48□□□□□ -0.41
PCF11-206ENST00000533018 C12orf45Q8N5I9 185 aaPredicted RBP12.48□□□□□ -0.41
PCF11-206ENST00000533018 RNF141Q8WVD5 230 aa12.48□□□□□ -0.41
PCF11-206ENST00000533018 C2orf50Q96LR7 162 aa12.48□□□□□ -0.41
PCF11-206ENST00000533018 NBDYA0A0U1RRE5 68 aa12.47□□□□□ -0.41
PCF11-206ENST00000533018 UBE2L5PA0A1B0GUS4 154 aa12.47□□□□□ -0.41
PCF11-206ENST00000533018 SNURFLB1AK76 121 aa12.47□□□□□ -0.41
PCF11-206ENST00000533018 GUK1Q16774 197 aa12.47□□□□□ -0.41
PCF11-206ENST00000533018 ZNF575Q86XF7 245 aa12.47□□□□□ -0.41
PCF11-206ENST00000533018 ZNRF2Q8NHG8 242 aa12.47□□□□□ -0.41
PCF11-206ENST00000533018 SAT2Q96F10 170 aaPredicted RBP12.47□□□□□ -0.41
PCF11-206ENST00000533018 PFDN5Q99471 154 aa12.47□□□□□ -0.41
PCF11-206ENST00000533018 WDR83OSQ9Y284 106 aa12.47□□□□□ -0.41
PCF11-206ENST00000533018 TRAV12-3A0A0B4J271 114 aa12.46□□□□□ -0.41
PCF11-206ENST00000533018 RLN2P04090 185 aa12.46□□□□□ -0.41
PCF11-206ENST00000533018 S100A11P31949 105 aa12.46□□□□□ -0.41
PCF11-206ENST00000533018 LEPP41159 167 aa12.46□□□□□ -0.41
PCF11-206ENST00000533018 STX12Q86Y82 276 aa12.46□□□□□ -0.41
PCF11-206ENST00000533018 GNPNAT1Q96EK6 184 aaPredicted RBP12.46□□□□□ -0.41
PCF11-206ENST00000533018 LINC00588Q9Y4M8 146 aa12.46□□□□□ -0.41
PCF11-206ENST00000533018 TRAV26-1A0A087WT03 109 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 A0A0J9YY99 117 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 GAGE12BA1L429 117 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 GAGE7O76087 117 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 H2AFB2P0C5Z0 115 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 GAGE12FP0CL80 117 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 GAGE12GP0CL81 117 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 GAGE12IP0CL82 117 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 CT45A10P0DMU9 189 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 SULT1A1P50225 295 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 HBG1P69891 147 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 HBG2P69892 147 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 SSX7Q7RTT5 188 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 LYRM2Q9NU23 88 aaPredicted RBP12.45□□□□□ -0.42
PCF11-206ENST00000533018 SLC39A9Q9NUM3 307 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 ZNF586Q9NXT0 402 aa12.45□□□□□ -0.42
PCF11-206ENST00000533018 FGF7P21781 194 aa12.44□□□□□ -0.42
PCF11-206ENST00000533018 RPL29P47914 159 aaKnown RBP12.44□□□□□ -0.42
PCF11-206ENST00000533018 RAB32Q13637 225 aa12.44□□□□□ -0.42
PCF11-206ENST00000533018 C6orf223Q8N319 242 aa12.44□□□□□ -0.42
PCF11-206ENST00000533018 ABCA13Q86UQ4 5058 aa12.44□□□□□ -0.42
PCF11-206ENST00000533018 FAM240BA0A1B0GVZ2 78 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 IGSF23A1L1A6 192 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 NPIPB6E9PJ23 425 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 M6PRP20645 277 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 TNP2Q05952 138 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 VWC2Q2TAL6 325 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 TMEM252Q8N6L7 170 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 C11orf1Q9H5F2 150 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 GPN1Q9HCN4 374 aaPredicted RBP12.43□□□□□ -0.42
PCF11-206ENST00000533018 NDUFA13Q9P0J0 144 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 TIMM9Q9Y5J7 89 aa12.43□□□□□ -0.42
PCF11-206ENST00000533018 ERCC8Q13216 396 aa12.42□□□□□ -0.42
PCF11-206ENST00000533018 BLNKQ8WV28 456 aa12.42□□□□□ -0.42
PCF11-206ENST00000533018 ODF3Q96PU9 254 aa12.42□□□□□ -0.42
PCF11-206ENST00000533018 PYGO2Q9BRQ0 406 aa12.42□□□□□ -0.42
PCF11-206ENST00000533018 TRBV19A0A075B6N1 114 aa12.41□□□□□ -0.42
PCF11-206ENST00000533018 M0R3E3 92 aa12.41□□□□□ -0.42
PCF11-206ENST00000533018 ZNF253O75346 499 aa12.41□□□□□ -0.42
PCF11-206ENST00000533018 ATP6V1FQ16864 119 aa12.41□□□□□ -0.42
PCF11-206ENST00000533018 MZT2BQ6NZ67 158 aa12.41□□□□□ -0.42
PCF11-206ENST00000533018 RXFP4Q8TDU9 374 aa12.41□□□□□ -0.42
PCF11-206ENST00000533018 CCDC32Q9BV29 185 aa12.41□□□□□ -0.42
PCF11-206ENST00000533018 Q9H8V8 135 aa12.41□□□□□ -0.42
PCF11-206ENST00000533018 C16orf90A8MZG2 172 aa12.4□□□□□ -0.42
PCF11-206ENST00000533018 PYYP10082 97 aa12.4□□□□□ -0.42
PCF11-206ENST00000533018 HOXA5P20719 270 aa12.4□□□□□ -0.42
PCF11-206ENST00000533018 LINC00612Q8N6U2 182 aa12.4□□□□□ -0.42
PCF11-206ENST00000533018 TRGV2A0A075B6R0 118 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 C7orf71A4D174 169 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 MPDU1O75352 247 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 SLC25A5P05141 298 aaKnown RBP12.39□□□□□ -0.43
PCF11-206ENST00000533018 HIST1H1EP10412 219 aaKnown RBP12.39□□□□□ -0.43
PCF11-206ENST00000533018 Q6ZTI0 123 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 THAP6Q8TBB0 222 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 MRPL53Q96EL3 112 aaKnown RBP12.39□□□□□ -0.43
PCF11-206ENST00000533018 NPCDR1Q9BY65 106 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 TMPRSS5Q9H3S3 457 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 TMEM14CQ9P0S9 112 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 PRELID1Q9Y255 219 aa12.39□□□□□ -0.43
PCF11-206ENST00000533018 RNASE4P34096 147 aaKnown RBP12.38□□□□□ -0.43
PCF11-206ENST00000533018 DAZ2Q13117 558 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms