RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 HIST1H1DP16402 221 aaKnown RBP2.44□□□□□ -2.02
SKP1-209ENST00000522552 SS18Q15532 418 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 TMEM136Q6ZRR5 245 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 SLC35E3Q7Z769 313 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 SFT2D1Q8WV19 159 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 CLEC2BQ92478 149 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 METTL1Q9UBP6 276 aaKnown RBP2.44□□□□□ -2.02
SKP1-209ENST00000522552 HHLA3Q9XRX5 114 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 IER3IP1Q9Y5U9 82 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 SLX4Q8IY92 1834 aa2.44□□□□□ -2.02
SKP1-209ENST00000522552 A2ML1A8K2U0 1454 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 RAPGEF2Q9Y4G8 1499 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 ZFYVE16Q7Z3T8 1539 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 SCN3AQ9NY46 2000 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 CCDC88CQ9P219 2028 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 IGLV3-12A0A075B6K2 115 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 TRAV3A0A0B4J244 114 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 CPSF4O95639 269 aaKnown RBP2.43□□□□□ -2.02
SKP1-209ENST00000522552 TNFP01375 233 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 CTSDP07339 412 aaPredicted RBP2.43□□□□□ -2.02
SKP1-209ENST00000522552 PEBP1P30086 187 aaKnown RBP2.43□□□□□ -2.02
SKP1-209ENST00000522552 PCBD1P61457 104 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 NNATQ16517 81 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 ESRGQ1W209 222 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 PABPC1L2AQ5JQF8 200 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 Q6ZUT4 128 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 C10orf111Q8N326 155 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 POP5Q969H6 163 aaKnown RBP2.43□□□□□ -2.02
SKP1-209ENST00000522552 NABP2Q9BQ15 211 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 LINC00467Q9BRT7 94 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 SNHG12Q9BXW3 62 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 RPL26L1Q9UNX3 145 aaKnown RBP2.43□□□□□ -2.02
SKP1-209ENST00000522552 TPRKBQ9Y3C4 175 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 HSPE1-MOB4S4R3N1 261 aa2.43□□□□□ -2.02
SKP1-209ENST00000522552 PLXNA3P51805 1871 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 CPAMD8Q8IZJ3 1885 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 CUL9Q8IWT3 2517 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 PLA2R1Q13018 1463 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 B4DSR2 109 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 RPL36A-HNRNPH2H7BZ11 118 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 KLF7O75840 302 aaPredicted RBP2.42□□□□□ -2.02
SKP1-209ENST00000522552 IGLV1-51P01701 117 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 RBP4P02753 201 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 OR5AS1Q8N127 324 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 SCRT1Q9BWW7 348 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 SEC11CQ9BY50 192 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 AGPAT4-IT1Q9H0P7 198 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 SAR1AQ9NR31 198 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 KIAA1549Q9HCM3 1950 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 AKAP12Q02952 1782 aa2.42□□□□□ -2.02
SKP1-209ENST00000522552 HELZP42694 1942 aaKnown RBP2.41□□□□□ -2.02
SKP1-209ENST00000522552 IGKV1D-42A0A075B6H8 117 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 LOC107986453A0A1B0GWG9 222 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 SAA1P0DJI8 122 aaPredicted RBP2.41□□□□□ -2.02
SKP1-209ENST00000522552 ROMO1P60602 79 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 S100A10P60903 97 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 ZNF90Q03938 601 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 CIRBPQ14011 172 aaKnown RBP2.41□□□□□ -2.02
SKP1-209ENST00000522552 LINC01545Q5VT33 79 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 SPINT4Q6UDR6 99 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 Q8N814 137 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 RPRMQ9NS64 109 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 TAS2R4Q9NYW5 299 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 R4GN34 69 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 PPIP5K1Q6PFW1 1433 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 IGKV2D-26A0A0A0MRZ7 120 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 A0A0J9YX75 114 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 LYRM1O43325 122 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 OTOSQ8NHW6 89 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 NAA60Q9H7X0 242 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 TAS2R8Q9NYW2 309 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 LY96Q9Y6Y9 160 aa2.41□□□□□ -2.02
SKP1-209ENST00000522552 QRICH2Q9H0J4 1663 aa2.4□□□□□ -2.02
SKP1-209ENST00000522552 ADGRB1O14514 1584 aa2.4□□□□□ -2.02
SKP1-209ENST00000522552 OR51F1A6NGY5 319 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 A6NN06 94 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 M0R2P5 195 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 MPC2O95563 127 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 TRACP01848 142 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 MGST1P10620 155 aaKnown RBP2.4□□□□□ -2.03
SKP1-209ENST00000522552 CKS2P33552 79 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 COL5A1-AS1Q5SY13 56 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 MIC13Q5XKP0 118 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 MRPL54Q6P161 138 aaKnown RBP2.4□□□□□ -2.03
SKP1-209ENST00000522552 C5orf17Q8NAS9 161 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 OR5AK2Q8NH90 309 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 HYLS1Q96M11 299 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 FAIMQ9NVQ4 179 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 CHCHD2Q9Y6H1 151 aaPredicted RBP2.4□□□□□ -2.03
SKP1-209ENST00000522552 MUC4Q99102 2169 aa2.4□□□□□ -2.03
SKP1-209ENST00000522552 IGHV3-64A0A075B6Q5 118 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 hDV103S1A0JD37 113 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 C17orf112F2Z3M2 114 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 GEMIN2O14893 280 aaKnown RBP2.39□□□□□ -2.03
SKP1-209ENST00000522552 SPINK8P0C7L1 97 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 Q56UQ5 140 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 C1orf134Q5TEV5 83 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 LINC00471Q8N535 108 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 COPS9Q8WXC6 57 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 SPANXDQ9BXN6 97 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms