RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 NEU1Q99519 415 aa10.2□□□□□ -0.78
VEGFA-221ENST00000520265 AAMDCQ9H7C9 122 aa10.2□□□□□ -0.78
VEGFA-221ENST00000520265 ZNF586Q9NXT0 402 aa10.2□□□□□ -0.78
VEGFA-221ENST00000520265 DEFB131BA0A096LNP1 70 aa10.19□□□□□ -0.78
VEGFA-221ENST00000520265 PRAC2D3DTV9 90 aa10.19□□□□□ -0.78
VEGFA-221ENST00000520265 HIST1H1EP10412 219 aaKnown RBP10.19□□□□□ -0.78
VEGFA-221ENST00000520265 FAM222AQ5U5X8 452 aa10.19□□□□□ -0.78
VEGFA-221ENST00000520265 RPP25LQ8N5L8 163 aaKnown RBP10.19□□□□□ -0.78
VEGFA-221ENST00000520265 SLC25A2Q9BXI2 301 aa10.19□□□□□ -0.78
VEGFA-221ENST00000520265 MRPL32Q9BYC8 188 aaKnown RBP10.19□□□□□ -0.78
VEGFA-221ENST00000520265 PARD6GQ9BYG4 376 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-221ENST00000520265 YTHDF2Q9Y5A9 579 aaKnown RBP10.19□□□□□ -0.78
VEGFA-221ENST00000520265 TRBV19A0A075B6N1 114 aa10.18□□□□□ -0.78
VEGFA-221ENST00000520265 TSPOP30536 169 aa10.18□□□□□ -0.78
VEGFA-221ENST00000520265 CDKN1BP46527 198 aa10.18□□□□□ -0.78
VEGFA-221ENST00000520265 C12orf74Q32Q52 190 aa10.18□□□□□ -0.78
VEGFA-221ENST00000520265 FAM122CQ6P4D5 195 aa10.18□□□□□ -0.78
VEGFA-221ENST00000520265 EXOC3-AS1Q8N2X6 119 aa10.18□□□□□ -0.78
VEGFA-221ENST00000520265 PAXXQ9BUH6 204 aa10.18□□□□□ -0.78
VEGFA-221ENST00000520265 TMEM14CQ9P0S9 112 aa10.18□□□□□ -0.78
VEGFA-221ENST00000520265 FUT9Q9Y231 359 aa10.18□□□□□ -0.78
VEGFA-221ENST00000520265 RYR3Q15413 4870 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 LYSTQ99698 3801 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 FXYD6-FXYD2A0A087WZ82 144 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 TEX48A0A1B0GUV7 120 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 A8MTW9 85 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 M0R3E3 92 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 PRM2P04554 102 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 UBE2L3P68036 154 aaKnown RBP10.17□□□□□ -0.78
VEGFA-221ENST00000520265 ICAM4Q14773 271 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 SAT2Q96F10 170 aaPredicted RBP10.17□□□□□ -0.78
VEGFA-221ENST00000520265 NIPSNAP3BQ9BS92 247 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 OR51M1Q9H341 326 aa10.17□□□□□ -0.78
VEGFA-221ENST00000520265 CRXO43186 299 aaPredicted RBP10.16□□□□□ -0.78
VEGFA-221ENST00000520265 EIF3GO75821 320 aaKnown RBP eCLIP10.16□□□□□ -0.78
VEGFA-221ENST00000520265 LEPP41159 167 aa10.16□□□□□ -0.78
VEGFA-221ENST00000520265 TAS2R45P59539 299 aa10.16□□□□□ -0.78
VEGFA-221ENST00000520265 DAD1P61803 113 aa10.16□□□□□ -0.78
VEGFA-221ENST00000520265 ACOT6Q3I5F7 207 aaPredicted RBP10.16□□□□□ -0.78
VEGFA-221ENST00000520265 KHDC3LQ587J8 217 aa10.16□□□□□ -0.78
VEGFA-221ENST00000520265 WFDC1Q9HC57 220 aa10.16□□□□□ -0.78
VEGFA-221ENST00000520265 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
VEGFA-221ENST00000520265 DKK2Q9UBU2 259 aa10.16□□□□□ -0.78
VEGFA-221ENST00000520265 PRELID1Q9Y255 219 aa10.16□□□□□ -0.78
VEGFA-221ENST00000520265 IGHV4-4A0A075B6R2 117 aa10.15□□□□□ -0.78
VEGFA-221ENST00000520265 A0A1W2PPV4 95 aa10.15□□□□□ -0.78
VEGFA-221ENST00000520265 ZNF253O75346 499 aa10.15□□□□□ -0.78
VEGFA-221ENST00000520265 GIPP09681 153 aaPredicted RBP10.15□□□□□ -0.78
VEGFA-221ENST00000520265 NBEAP1P0C6P0 100 aa10.15□□□□□ -0.78
VEGFA-221ENST00000520265 ERCC8Q13216 396 aa10.15□□□□□ -0.78
VEGFA-221ENST00000520265 PDE6HQ13956 83 aa10.15□□□□□ -0.78
VEGFA-221ENST00000520265 TMEM256Q8N2U0 113 aa10.15□□□□□ -0.78
VEGFA-221ENST00000520265 HSD17B11Q8NBQ5 300 aa10.15□□□□□ -0.78
VEGFA-221ENST00000520265 INO80EQ8NBZ0 244 aaPredicted RBP10.15□□□□□ -0.78
VEGFA-221ENST00000520265 RNF141Q8WVD5 230 aa10.15□□□□□ -0.78
VEGFA-221ENST00000520265 IGKV2-40A0A087WW87 121 aaPredicted RBP10.14□□□□□ -0.79
VEGFA-221ENST00000520265 NDUFB4O95168 129 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 IGKV2D-40P01614 121 aaPredicted RBP10.14□□□□□ -0.79
VEGFA-221ENST00000520265 DEFB130BP0DP73 79 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 DEFB130AP0DP74 79 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 ZNF266Q14584 549 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 KIR3DS1Q14943 382 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 GFI1BQ5VTD9 330 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 CCDC28AQ8IWP9 274 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 MRPL53Q96EL3 112 aaKnown RBP10.14□□□□□ -0.79
VEGFA-221ENST00000520265 PHYHIPLQ96FC7 376 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 FAM167A-AS1Q96KT0 104 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 RPH3ALQ9UNE2 315 aa10.14□□□□□ -0.79
VEGFA-221ENST00000520265 DYNC2H1Q8NCM8 4307 aaKnown RBP10.14□□□□□ -0.79
VEGFA-221ENST00000520265 TRAV12-3A0A0B4J271 114 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 NPIPB6E9PJ23 425 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 CT45A10P0DMU9 189 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 CSN1S1P47710 185 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 TAS2R60P59551 318 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 RAB2AP61019 212 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
VEGFA-221ENST00000520265 TMEM78Q5T7P6 136 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 OR2T35Q8NGX2 323 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 FXYD5Q96DB9 178 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 HYLS1Q96M11 299 aa10.13□□□□□ -0.79
VEGFA-221ENST00000520265 H7BYZ3 331 aa10.12□□□□□ -0.79
VEGFA-221ENST00000520265 HMGB3O15347 200 aaKnown RBP10.12□□□□□ -0.79
VEGFA-221ENST00000520265 AZU1P20160 251 aa10.12□□□□□ -0.79
VEGFA-221ENST00000520265 M6PRP20645 277 aa10.12□□□□□ -0.79
VEGFA-221ENST00000520265 TCTAP57738 103 aa10.12□□□□□ -0.79
VEGFA-221ENST00000520265 Q5BKY6 102 aa10.12□□□□□ -0.79
VEGFA-221ENST00000520265 C16orf74Q96GX8 76 aa10.12□□□□□ -0.79
VEGFA-221ENST00000520265 NDUFAF3Q9BU61 184 aa10.12□□□□□ -0.79
VEGFA-221ENST00000520265 RYR2Q92736 4967 aa10.12□□□□□ -0.79
VEGFA-221ENST00000520265 ALMS1Q8TCU4 4167 aa10.11□□□□□ -0.79
VEGFA-221ENST00000520265 RNASE4P34096 147 aaKnown RBP10.11□□□□□ -0.79
VEGFA-221ENST00000520265 LGALS9CQ6DKI2 356 aa10.11□□□□□ -0.79
VEGFA-221ENST00000520265 IQCF2Q8IXL9 164 aa10.11□□□□□ -0.79
VEGFA-221ENST00000520265 OR10G4Q8NGN3 311 aa10.11□□□□□ -0.79
VEGFA-221ENST00000520265 OR10G9Q8NGN4 311 aa10.11□□□□□ -0.79
VEGFA-221ENST00000520265 OR10G7Q8NGN6 311 aa10.11□□□□□ -0.79
VEGFA-221ENST00000520265 ASB13Q8WXK3 278 aa10.11□□□□□ -0.79
VEGFA-221ENST00000520265 AQP10Q96PS8 301 aa10.11□□□□□ -0.79
VEGFA-221ENST00000520265 Q9H3A6 140 aa10.11□□□□□ -0.79
VEGFA-221ENST00000520265 APLNQ9ULZ1 77 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms