RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 RPL26L1Q9UNX3 145 aaKnown RBP2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 ADGRB1O14514 1584 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 KIAA1551Q9HCM1 1747 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 CFTRP13569 1480 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 IGKV2D-26A0A0A0MRZ7 120 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 TRAV1-1A0A0B4J248 108 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 IGHV1-18A0A0C4DH31 117 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 A0A0J9YX75 114 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 RPL36A-HNRNPH2H7BZ11 118 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 M0R233 179 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 YPEL1O60688 119 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 KLF7O75840 302 aaPredicted RBP2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 TRACP01848 142 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 CKS2P33552 79 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 ZNF90Q03938 601 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 COL5A1-AS1Q5SY13 56 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 MIC13Q5XKP0 118 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 Q6ZQT0 140 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 TMEM136Q6ZRR5 245 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 Q8IYB0 196 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 C10orf111Q8N326 155 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 LINC00471Q8N535 108 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 OR5AK2Q8NH90 309 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 OTOSQ8NHW6 89 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 SCRT1Q9BWW7 348 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 SNHG12Q9BXW3 62 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 SEC11CQ9BY50 192 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 NAA60Q9H7X0 242 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 LY96Q9Y6Y9 160 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 MAPKBP1O60336 1514 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 MALRD1Q5VYJ5 2156 aa2.42□□□□□ -2.02
RNU4-60P-201ENST00000517239 CITO14578 2027 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 HELZP42694 1942 aaKnown RBP2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 IGLV3-16A0A075B6K0 115 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 PNMA8CA0A1B0GUJ8 204 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 hDV103S1A0JD37 113 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 CPSF4O95639 269 aaKnown RBP2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 TNFP01375 233 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 PMP2P02689 132 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 C9orf153Q5TBE3 101 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 KRTAP19-1Q8IUB9 90 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 SVBPQ8N300 66 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 CCL4L1Q8NHW4 92 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 CST11Q9H112 138 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 SAR1AQ9NR31 198 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 RPRMQ9NS64 109 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 TAS2R8Q9NYW2 309 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 IER3IP1Q9Y5U9 82 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 CCDC88CQ9P219 2028 aa2.41□□□□□ -2.02
RNU4-60P-201ENST00000517239 ALPK3Q96L96 1907 aa2.4□□□□□ -2.02
RNU4-60P-201ENST00000517239 SCAF11Q99590 1463 aaKnown RBP2.4□□□□□ -2.02
RNU4-60P-201ENST00000517239 CC2D2AQ9P2K1 1620 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 B4DSR2 109 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 ZNF736B4DX44 427 aaPredicted RBP2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 C17orf112F2Z3M2 114 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 GEMIN2O14893 280 aaKnown RBP2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 SPINK8P0C7L1 97 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 CCL4P13236 92 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 ETV6P41212 452 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 EIF4EBP1Q13541 118 aaPredicted RBP2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 LINC01545Q5VT33 79 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 Q8N814 137 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 C5orf17Q8NAS9 161 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 RAB37Q96AX2 223 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 HYLS1Q96M11 299 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 NABP2Q9BQ15 211 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 HIGD2AQ9BW72 106 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 AGPAT4-IT1Q9H0P7 198 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 Q9H521 79 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 CHCHD2Q9Y6H1 151 aaPredicted RBP2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 STRCQ7RTU9 1775 aa2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 BAZ1AQ9NRL2 1556 aaPredicted RBP2.4□□□□□ -2.03
RNU4-60P-201ENST00000517239 TRAV40A0A0B4J280 105 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 OR51F1A6NGY5 319 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 HMSDA8MTL9 139 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 PSCAO43653 123 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 IGLV1-51P01701 117 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 CRPP02741 224 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 HINT1P49773 126 aaPredicted RBP2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 SPINT4Q6UDR6 99 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 OR2T35Q8NGX2 323 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 SPANXDQ9BXN6 97 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 C14orf132Q9NPU4 83 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 FAIMQ9NVQ4 179 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 SERP1Q9Y6X1 66 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 MGAMO43451 1857 aa2.39□□□□□ -2.03
RNU4-60P-201ENST00000517239 COL11A1P12107 1806 aaPredicted RBP2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 WNK3Q9BYP7 1800 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 IGHV3-64A0A075B6Q5 118 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 IGHV1-24A0A0C4DH33 117 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 LOC107984156A0A0G2JMH3 177 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 MCRIP1C9JLW8 97 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 APOC4-APOC2K7ER74 178 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 M0R2P5 195 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 PITX3O75364 302 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 HYPMO75409 117 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 MPC2O95563 127 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 APOC2P02655 101 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 IFITM1P13164 125 aa2.38□□□□□ -2.03
RNU4-60P-201ENST00000517239 ROMO1P60602 79 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms