RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 SPTBN1Q01082 2364 aaKnown RBP-1.65□□□□□ -2.67
RNU6-561P-201ENST00000516222 C2CD3Q4AC94 2353 aa-1.65□□□□□ -2.67
RNU6-561P-201ENST00000516222 DUXBA0A1W2PPF3 345 aa-1.66□□□□□ -2.68
RNU6-561P-201ENST00000516222 APODP05090 189 aa-1.66□□□□□ -2.68
RNU6-561P-201ENST00000516222 GLRXP35754 106 aa-1.66□□□□□ -2.68
RNU6-561P-201ENST00000516222 PMS2P3Q13401 168 aa-1.66□□□□□ -2.68
RNU6-561P-201ENST00000516222 C1orf140Q5VVS0 124 aa-1.66□□□□□ -2.68
RNU6-561P-201ENST00000516222 SLC25A40Q8TBP6 338 aa-1.66□□□□□ -2.68
RNU6-561P-201ENST00000516222 RAB8BQ92930 207 aa-1.66□□□□□ -2.68
RNU6-561P-201ENST00000516222 FGFR1OP2Q9NVK5 253 aa-1.66□□□□□ -2.68
RNU6-561P-201ENST00000516222 RAD50Q92878 1312 aa-1.66□□□□□ -2.68
RNU6-561P-201ENST00000516222 FAT2Q9NYQ8 4349 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 MYO5AQ9Y4I1 1855 aaKnown RBP-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 SPTA1P02549 2419 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 ROBO3Q96MS0 1386 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 NUP98P52948 1817 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 hCG_1818297A0A087WSY0 165 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 A8MT66 165 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 RPS12P25398 132 aaKnown RBP-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 BLVRAP53004 296 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 SPCS3P61009 180 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 MLLT11Q13015 90 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 DIAPH2-AS1Q14236 149 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 VMA21Q3ZAQ7 101 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 Q6Q795 121 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 C12orf45Q8N5I9 185 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 STAG3L4Q8TBR4 150 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 CT55Q8WUE5 264 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 PPP1R1CQ8WVI7 109 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 DCUN1D1Q96GG9 259 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 PPP1R2P1Q96PQ5 205 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 CMSS1Q9BQ75 279 aaKnown RBP-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 SIKE1Q9BRV8 207 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 UCK1Q9HA47 277 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 PLEKHJ1Q9NW61 149 aa-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 WRNQ14191 1432 aaPredicted RBP eCLIP-1.67□□□□□ -2.68
RNU6-561P-201ENST00000516222 SVEP1Q4LDE5 3571 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 A0A0D9SFI3 127 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 C9JAW5 83 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 GOLGA8KD6RF30 607 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 TCL1AP56279 114 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 KLRD1Q13241 179 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 HIST3H3Q16695 136 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 RRN3P1Q2M238 152 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 C3orf62Q6ZUJ4 267 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 TEX37Q96LM6 180 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 CNFNQ9BYD5 112 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 PKIGQ9Y2B9 76 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 BLMP54132 1417 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 FMN1Q68DA7 1419 aa-1.68□□□□□ -2.68
RNU6-561P-201ENST00000516222 A0A087WTM6 91 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 KPNA3O00505 521 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 IGF2P01344 180 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 IFNA4P05014 189 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 C8GP07360 202 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 SPRR2AP35326 72 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 TMEM86BQ8N661 226 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 SMIM11BQ8TCY0 68 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 MRPS26Q9BYN8 205 aaKnown RBP-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 AGPAT3Q9NRZ7 376 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 COA4Q9NYJ1 87 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 TRPM7Q96QT4 1865 aa-1.69□□□□□ -2.68
RNU6-561P-201ENST00000516222 RREB1Q92766 1687 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 PKHD1P08F94 4074 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 BBIP1A8MTZ0 92 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 LRRN3E7EW58 273 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 K7EQZ3 153 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 M0QZ92 97 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 DCTN3O75935 186 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 TNNC2P02585 160 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 OCM2P0CE71 109 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 MED21Q13503 144 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 GNPDA2Q8TDQ7 276 aa-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 C7orf50Q9BRJ6 194 aaKnown RBP-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 MRPL36Q9P0J6 103 aaKnown RBP-1.7□□□□□ -2.68
RNU6-561P-201ENST00000516222 CHD8Q9HCK8 2581 aa-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 GVQW2A0A096LPI5 108 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 TRPC5OSA6NMA1 111 aa-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 PHBP35232 272 aa-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 DYNLT3P51808 116 aa-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 MYL6P60660 151 aa-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 ACOT6Q3I5F7 207 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 CSAG1Q6PB30 78 aa-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 IFT20Q8IY31 132 aa-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 MAP1LC3BQ9GZQ8 125 aa-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 CACYBPQ9HB71 228 aaKnown RBP-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 MYH9P35579 1960 aaKnown RBP-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 CDK12Q9NYV4 1490 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-561P-201ENST00000516222 C9orf84Q5VXU9 1444 aa-1.72□□□□□ -2.68
RNU6-561P-201ENST00000516222 TMEM256-PLSCR3K7ERE1 68 aa-1.72□□□□□ -2.68
RNU6-561P-201ENST00000516222 CALUO43852 315 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-561P-201ENST00000516222 S100A9P06702 114 aaKnown RBP-1.72□□□□□ -2.68
RNU6-561P-201ENST00000516222 IDO1P14902 403 aa-1.72□□□□□ -2.68
RNU6-561P-201ENST00000516222 PIGPP57054 158 aa-1.72□□□□□ -2.68
RNU6-561P-201ENST00000516222 UBE2DNLQ8IWF7 75 aa-1.72□□□□□ -2.68
RNU6-561P-201ENST00000516222 BORCS7Q96B45 105 aa-1.72□□□□□ -2.68
RNU6-561P-201ENST00000516222 OR4C12Q96R67 309 aa-1.72□□□□□ -2.68
RNU6-561P-201ENST00000516222 EFCAB11Q9BUY7 163 aa-1.72□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms