RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 IGHV1-3A0A0C4DH29 117 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 SERTM2A0A1B0GWG4 89 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 FBLL1A6NHQ2 334 aaKnown RBP2.88□□□□□ -1.95
CAST-242ENST00000515063 ZNF705GA8MUZ8 300 aaPredicted RBP2.88□□□□□ -1.95
CAST-242ENST00000515063 A8MWL6 223 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 E7EUB6 86 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 SLC17A3O00476 420 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 NDUFA3O95167 84 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 GPX1P07203 203 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 NBEAP1P0C6P0 100 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 PPIAL4GP0DN37 164 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 PMCHP20382 165 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 CBLN1P23435 193 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 GATA2P23769 480 aaPredicted RBP2.88□□□□□ -1.95
CAST-242ENST00000515063 CEACAM3P40198 252 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 IER3P46695 156 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 FOXA3P55318 350 aaPredicted RBP2.88□□□□□ -1.95
CAST-242ENST00000515063 UBE2G1P62253 170 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 OR5I1Q13606 314 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 USF2Q15853 346 aaPredicted RBP2.88□□□□□ -1.95
CAST-242ENST00000515063 CLEC12BQ2HXU8 276 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 KLK9Q2XQG4 91 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 LINC00305Q7Z4B0 112 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 PPP1R27Q86WC6 154 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 BAGE3Q86Y29 109 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 TMEM256Q8N2U0 113 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 MUC15Q8N387 334 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 KIR3DL3Q8N743 410 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 SIGLECL1Q8N7X8 197 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 GATD1Q8NB37 220 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 ST6GALNAC3Q8NDV1 305 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 NPBQ8NG41 125 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 OR11H6Q8NGC7 330 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 TSKUQ8WUA8 353 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 RPEQ96AT9 228 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 GPR82Q96P67 336 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 ATG101Q9BSB4 218 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 RAB1BQ9H0U4 201 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 OTORQ9NRC9 128 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 ZNF586Q9NXT0 402 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 DPM3Q9P2X0 92 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 NAT8BQ9UHF3 227 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 KLK9Q9UKQ9 250 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 TP53TG3Q9ULZ0 132 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 EPDR1Q9UM22 224 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 HIGD1AQ9Y241 93 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 KMT2BQ9UMN6 2715 aaPredicted RBP2.88□□□□□ -1.95
CAST-242ENST00000515063 MUC3AQ02505 3323 aa2.88□□□□□ -1.95
CAST-242ENST00000515063 PTPRZ1P23471 2315 aaPredicted RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 CFAP54Q96N23 3096 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 MALRD1Q5VYJ5 2156 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 CNOT1A5YKK6 2376 aaKnown RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 FRYLO94915 3013 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 TRAV5A0A0B4J249 113 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 A0A1B0GW15 77 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 A0A1B0GXF2 115 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 C20orf202A1L168 122 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 C19orf71A6NCJ1 209 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 PGPA6NDG6 321 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 ZNF705FA8MVS1 300 aaPredicted RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 I3L2K1 104 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 M0R143 59 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 NUPR1O60356 82 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 ZNF253O75346 499 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 ZNF324O75467 553 aaPredicted RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 SCGB2A1O75556 95 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 SERF1AO75920 110 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 LTAP01374 205 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 APCSP02743 223 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 SLC25A5P05141 298 aaKnown RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 IGLC1P0CG04 106 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 ZNF705DP0CH99 300 aaPredicted RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 ZNF705BP0CI00 300 aaPredicted RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 PYYP10082 97 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 MGST1P10620 155 aaKnown RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 GP9P14770 177 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 PRTN3P24158 256 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 HTR1DP28221 377 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 FCGR2BP31994 310 aaPredicted RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 REG1BP48304 166 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 MFAP2P55001 183 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 KLRB1Q12918 225 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 PDE6HQ13956 83 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 EBI3Q14213 229 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 DIAPH2-AS1Q14236 149 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 MMDQ15546 238 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 PMCHL1Q16048 86 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 TNXAQ16473 311 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 TPTE2P1Q5T6R2 138 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 MINOS1Q5TGZ0 78 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 Q6AWC8 147 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 ZNF600Q6ZNG1 722 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 ZNF843Q8N446 348 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 NUP35Q8NFH5 326 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 SRSF12Q8WXF0 261 aaKnown RBP2.87□□□□□ -1.95
CAST-242ENST00000515063 TIMD4Q96H15 378 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 KCNS1Q96KK3 526 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 TBX15Q96SF7 602 aa2.87□□□□□ -1.95
CAST-242ENST00000515063 TXN2Q99757 166 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms