RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 C3orf36Q3SXR2 165 aa10.77□□□□□ -0.69
TCOF1-214ENST00000515035 TRGV1A0A0A0MS02 117 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 INS-IGF2F8WCM5 200 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 INSP01308 110 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 ZNF415Q09FC8 603 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 C5orf64Q2M2E5 130 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 LGALS9BQ3B8N2 356 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 LGALS9CQ6DKI2 356 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 SHANK2-AS3Q9BTD1 123 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 TP53TG1Q9Y2A0 90 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 CACNA1BQ00975 2339 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 PAX9P55771 341 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 PDE6HQ13956 83 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 FGF6P10767 208 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 PHF3Q92576 2039 aaKnown RBP10.76□□□□□ -0.69
TCOF1-214ENST00000515035 IGKV1-6A0A0C4DH72 117 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 IGKV1-16P04430 117 aa10.76□□□□□ -0.69
TCOF1-214ENST00000515035 THBDP07204 575 aa10.75□□□□□ -0.69
TCOF1-214ENST00000515035 PMVKQ15126 192 aa10.75□□□□□ -0.69
TCOF1-214ENST00000515035 DTX2Q86UW9 622 aa10.75□□□□□ -0.69
TCOF1-214ENST00000515035 Q8N8P6 123 aa10.75□□□□□ -0.69
TCOF1-214ENST00000515035 PRSS46E5RG02 174 aa10.75□□□□□ -0.69
TCOF1-214ENST00000515035 ZNF114Q8NC26 417 aa10.75□□□□□ -0.69
TCOF1-214ENST00000515035 IGHV3-53P01767 116 aa10.75□□□□□ -0.69
TCOF1-214ENST00000515035 AMTNQ6UX39 209 aa10.75□□□□□ -0.69
TCOF1-214ENST00000515035 GAGE12JA6NER3 117 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 GAGE7O76087 117 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 GAGE12FP0CL80 117 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 GAGE12GP0CL81 117 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 GAGE12IP0CL82 117 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 CDKN1BP46527 198 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 GAGE4Q13068 117 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 VWC2Q2TAL6 325 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 ABCA4P78363 2273 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 CDPF1Q6NVV7 123 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 TMEM219Q86XT9 240 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 ANAPC10Q9UM13 185 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 FAM231DQ6ZW35 169 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 TMEM75Q8N9X5 138 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 OR11H6Q8NGC7 330 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 MYO7BQ6PIF6 2116 aa10.74□□□□□ -0.69
TCOF1-214ENST00000515035 IGKV1D-17A0A075B6S4 117 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 K7ERJ3 54 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 KLRD1Q13241 179 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 SPANXDQ9BXN6 97 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 TMEM178BH3BS89 294 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 ZNF672Q499Z4 452 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-214ENST00000515035 PRO1854Q9UHT4 67 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 TRBV7-1A0A0A6YYK4 115 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 Q6ZVH6 145 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 VMO1Q7Z5L0 202 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 C1QTNF4Q9BXJ3 329 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 OOSP1A8MZH6 123 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 DSCR9P59020 149 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 MRPL51Q4U2R6 128 aaKnown RBP10.73□□□□□ -0.69
TCOF1-214ENST00000515035 UTF1Q5T230 341 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 ARTNQ5T4W7 220 aa10.73□□□□□ -0.69
TCOF1-214ENST00000515035 MRPL35Q9NZE8 188 aaKnown RBP10.73□□□□□ -0.69
TCOF1-214ENST00000515035 A0A1W2PPI3 338 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 SMIM27A0A1W2PRY6 76 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 TRACP01848 142 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 VGLL1Q99990 258 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 CLPSP04118 112 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 FHL1Q13642 323 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 HAPLN4Q86UW8 402 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 CEND1Q8N111 149 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 GAFA1Q96PS6 74 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 HS3ST6Q96QI5 342 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 TRPT1Q86TN4 253 aaKnown RBP10.72□□□□□ -0.69
TCOF1-214ENST00000515035 GPR179Q6PRD1 2367 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 DOCK7Q96N67 2140 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 TMEM141Q96I45 108 aa10.72□□□□□ -0.69
TCOF1-214ENST00000515035 B5MCH6 92 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 F8WEM9 126 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 UBL5Q9BZL1 73 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 BUB1B-PAK6H3BSN5 160 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 TAL2Q16559 108 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 C8orf49Q96NF6 230 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 SIGLEC8Q9NYZ4 499 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 CCL25O15444 150 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 MINOS1Q5TGZ0 78 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 C11orf44Q8N8P7 122 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 MINOS1-NBL1R4GNA1 71 aa10.71□□□□□ -0.69
TCOF1-214ENST00000515035 Q6ZS92 163 aa10.71□□□□□ -0.7
TCOF1-214ENST00000515035 MDS2Q8NDY4 140 aa10.71□□□□□ -0.7
TCOF1-214ENST00000515035 SRSF8Q9BRL6 282 aaKnown RBP10.71□□□□□ -0.7
TCOF1-214ENST00000515035 RLFQ13129 1914 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 IGLC7A0M8Q6 106 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 CEACAM8P31997 349 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-214ENST00000515035 RHPN1-AS1Q9BWJ2 59 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 MRAPQ8TCY5 172 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 PLCE1Q9P212 2302 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 KIR2DL5BA0A0G2JN68 375 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 KIR2DL5BA0A0G2JPC4 375 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 HAMPP81172 84 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 KIR2DL5AQ8N109 375 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 C1orf147Q96MC9 270 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-214ENST00000515035 TMEM14BQ9NUH8 114 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 GNLYP22749 145 aa10.7□□□□□ -0.7
TCOF1-214ENST00000515035 DTX1Q86Y01 620 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms