RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ATP6V1FQ16864 119 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 TMEM88Q6PEY1 159 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 C16orf74Q96GX8 76 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 LINC01587Q99440 93 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 C20orf144Q9BQM9 153 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 GPN1Q9HCN4 374 aaPredicted RBP7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 PTTG2Q9NZH5 202 aa7.39□□□□□ -1.23
HMGXB3-205ENST00000514469 A6NHS1 94 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 NPIPB6E9PJ23 425 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 H7BYZ3 331 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 PRAF2O60831 178 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 MPDU1O75352 247 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 LINC00336Q6ZUF6 198 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 OR10J6PQ8NGY7 276 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 RNASE8Q8TDE3 154 aaKnown RBP7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 NPCDR1Q9BY65 106 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 NMES1Q9C002 83 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 ZNF586Q9NXT0 402 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 TMEM14CQ9P0S9 112 aa7.38□□□□□ -1.23
HMGXB3-205ENST00000514469 TRBV19A0A075B6N1 114 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 SIX6O95475 246 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 KIR3DS1Q14943 382 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 LGALS9BQ3B8N2 356 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 RNF212Q495C1 297 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 GFI1BQ5VTD9 330 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 ZNF493Q6ZR52 646 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 UBE2DNLQ8IWF7 75 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 C15orf53Q8NAA6 179 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 TMEM263Q8WUH6 116 aaKnown RBP7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 MRPL53Q96EL3 112 aaKnown RBP7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 ODF3Q96PU9 254 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 PARD6GQ9BYG4 376 aaPredicted RBP7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 OR5AC2Q9NZP5 309 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 PKHD1P08F94 4074 aa7.37□□□□□ -1.23
HMGXB3-205ENST00000514469 E5RGE8 158 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 H0YIZ8 118 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 NDUFB4O95168 129 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 DEFB130BP0DP73 79 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 DEFB130AP0DP74 79 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 NHLH2Q02577 135 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 PDE6HQ13956 83 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 FCN2Q15485 313 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 GCSAMLQ5JQS6 135 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 OR5C1Q8NGR4 320 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 THAP6Q8TBB0 222 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 SLC25A31Q9H0C2 315 aa7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 TIMM8BQ9Y5J9 83 aaPredicted RBP7.36□□□□□ -1.23
HMGXB3-205ENST00000514469 A0A1B0GVY2 172 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 CBY3A6NI87 242 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 INMT-MINDY4F8WBC2 141 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 M0R2N4 97 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 M0R3E3 92 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 RTL8CO15255 209 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 RLN2P04090 185 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 ATP5G1P05496 136 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 PYYP10082 97 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 HIST1H1EP10412 219 aaKnown RBP7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 HTN1P15515 57 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 LEPP41159 167 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 ATP5G3P48201 142 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 H2BFSP57053 126 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 LRRC37A5PQ49AS3 106 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 Q6ZR54 194 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 LINC00612Q8N6U2 182 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 MARVELD1Q9BSK0 173 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 SLC25A2Q9BXI2 301 aa7.35□□□□□ -1.23
HMGXB3-205ENST00000514469 F5H768 121 aa7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 FAM3BP58499 235 aaPredicted RBP7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 CYCSP99999 105 aaKnown RBP7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 CLINT1Q14677 625 aa7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 FAM167A-AS1Q96KT0 104 aa7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 FAM19A4Q96LR4 140 aa7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 WDR61Q9GZS3 305 aaKnown RBP7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 NOP10Q9NPE3 64 aaKnown RBP7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 KCNIP2Q9NS61 270 aa7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 PRELID1Q9Y255 219 aa7.34□□□□□ -1.23
HMGXB3-205ENST00000514469 KIAA1109Q2LD37 5005 aa7.34□□□□□ -1.24
HMGXB3-205ENST00000514469 DNAH11Q96DT5 4516 aa7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 DYNC1H1Q14204 4646 aaKnown RBP7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 IGLV2-18A0A075B6J9 118 aa7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 TRAV12-3A0A0B4J271 114 aa7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 J3KRW8 73 aa7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 MIR17HGQ75NE6 70 aa7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 EXOC3-AS1Q8N2X6 119 aa7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 BLNKQ8WV28 456 aa7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 PPP1R1CQ8WVI7 109 aa7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 MRPL32Q9BYC8 188 aaKnown RBP7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 TIMM9Q9Y5J7 89 aa7.33□□□□□ -1.24
HMGXB3-205ENST00000514469 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 KLLNB2CW77 178 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 SLC25A5P05141 298 aaKnown RBP7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 PET100P0DJ07 73 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 DEFA1P59665 94 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 DEFA3P59666 94 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 ERCC8Q13216 396 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 CCDC28AQ8IWP9 274 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 RNF141Q8WVD5 230 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 LINC00477Q96M19 166 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 ATP5SQ99766 215 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms