RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 GGNBP1Q5YKI7 109 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 ARPC5LQ9BPX5 153 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 TMEM222Q9H0R3 208 aa5.71□□□□□ -1.5
CLCN3-208ENST00000512813 IGHV3-64A0A075B6Q5 118 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 RGS13O14921 159 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 CXCL2P19875 107 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 BTN1A1Q13410 526 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 TRIM16LQ309B1 348 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 NIT1Q86X76 327 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 OR10G9Q8NGN4 311 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 SLC25A38Q96DW6 304 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 TMEM147Q9BVK8 224 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 C1orf43Q9BWL3 253 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 MND1Q9BWT6 205 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 SH3BGRL3Q9H299 93 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 ZNF331Q9NQX6 463 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-208ENST00000512813 KLK12Q9UKR0 248 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 SSR3Q9UNL2 185 aa5.7□□□□□ -1.5
CLCN3-208ENST00000512813 PDCD5O14737 125 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 GYG2O15488 501 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 ORM2P19652 201 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 GPX4P36969 197 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-208ENST00000512813 CCR6P51684 374 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 TRAM1Q15629 374 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 LCN15Q6UWW0 184 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 OR4C5Q8NGB2 326 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 UFD1Q92890 307 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 SLC50A1Q9BRV3 221 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 SHANK2-AS3Q9BTD1 123 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 AUNIPQ9H7T9 357 aa5.69□□□□□ -1.5
CLCN3-208ENST00000512813 LSM2Q9Y333 95 aaKnown RBP5.69□□□□□ -1.5
CLCN3-208ENST00000512813 IGHV3-16A0A0C4DH30 117 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 CEBPZOSA8MTT3 80 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 HLA-DQA1P01909 254 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 CFC1BP0CG36 223 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 POLR2GP62487 172 aaKnown RBP eCLIP5.68□□□□□ -1.5
CLCN3-208ENST00000512813 Q0VG73 95 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 SPHARQ15513 63 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 RHOHQ15669 191 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 GPR107Q5VW38 600 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 LPCAT3Q6P1A2 487 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 Q6ZQT7 251 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 Q6ZRP5 223 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 AHSA2Q719I0 299 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 SLC25A29Q8N8R3 303 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 PRADC1Q9BSG0 188 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-208ENST00000512813 URGCP-MRPS24S4R325 110 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
CLCN3-208ENST00000512813 TRAV1-2A0A0B4J238 106 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 FABP5Q01469 135 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 OPCMLQ14982 345 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 SPCS2Q15005 226 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 LGI3Q8N145 548 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 CHAC2Q8WUX2 184 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 TRIM63Q969Q1 353 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 FAM19A4Q96LR4 140 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 SPXQ9BT56 116 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 C8orf4Q9NR00 106 aa5.67□□□□□ -1.5
CLCN3-208ENST00000512813 TRAV18A0A075B6X5 111 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 MUC21A0A0G2JKD1 596 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 TRBV6-4A0A1B0GX49 114 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 MRPS12O15235 138 aaKnown RBP5.66□□□□□ -1.5
CLCN3-208ENST00000512813 PMP2P02689 132 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 OR4E1P0C645 316 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 RAB3BP20337 219 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 RNASE4P34096 147 aaKnown RBP5.66□□□□□ -1.5
CLCN3-208ENST00000512813 TAS2R46P59540 309 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 ELOBQ15370 118 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 OR4D10Q8NGI6 311 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 OR52I2Q8NH67 350 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 LYPD6BQ8NI32 183 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 RNASE11Q8TAA1 199 aaKnown RBP5.66□□□□□ -1.5
CLCN3-208ENST00000512813 TP53RKQ96S44 253 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 U3KQ87 197 aa5.66□□□□□ -1.5
CLCN3-208ENST00000512813 IGLV1-50A0A075B6I6 118 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 A0A087WWC5 75 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 MEIS3P1A6NDR6 274 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 FBLL1A6NHQ2 334 aaKnown RBP5.65□□□□□ -1.5
CLCN3-208ENST00000512813 PMS2P5A8MQ11 134 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 CRISP2P16562 243 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 HLA-DMAP28067 261 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 TSPAN5P62079 268 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 ACOT7LQ6ZUV0 252 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 OR1S1Q8NH92 325 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 NRG4Q8WWG1 115 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 LINC00479Q96M42 142 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 CHCHD7Q9BUK0 85 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 MED4Q9NPJ6 270 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 IFT46Q9NQC8 304 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 FKBP14Q9NWM8 211 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 RHBDL2Q9NX52 303 aa5.65□□□□□ -1.5
CLCN3-208ENST00000512813 SCO2A0A1W2PP80 73 aa5.64□□□□□ -1.51
CLCN3-208ENST00000512813 SLC17A3O00476 420 aa5.64□□□□□ -1.51
CLCN3-208ENST00000512813 TCRBP04435 133 aa5.64□□□□□ -1.51
CLCN3-208ENST00000512813 SMIM18P0DKX4 95 aa5.64□□□□□ -1.51
CLCN3-208ENST00000512813 LINC00694P0DN24 101 aa5.64□□□□□ -1.51
CLCN3-208ENST00000512813 CRYGAP11844 174 aa5.64□□□□□ -1.51
CLCN3-208ENST00000512813 PI3P19957 117 aa5.64□□□□□ -1.51
CLCN3-208ENST00000512813 UCP3P55916 312 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms